RNA–Protein interactions for RNA: ENST00000528824.1

SNX7-204, Transcript of sorting nexin 7, humanhuman

TSL 1 (best)

Gene SNX7, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-204ENST00000528824 NCOA2Q15596 1464 aa12.18□□□□□ -0.46
SNX7-204ENST00000528824 UBR1Q8IWV7 1749 aa12.18□□□□□ -0.46
SNX7-204ENST00000528824 ARHGAP31Q2M1Z3 1444 aa12.18□□□□□ -0.46
SNX7-204ENST00000528824 KANK1Q14678 1352 aa12.18□□□□□ -0.46
SNX7-204ENST00000528824 TMEM2Q9UHN6 1383 aa12.18□□□□□ -0.46
SNX7-204ENST00000528824 SPATA31A6Q5VVP1 1343 aa12.17□□□□□ -0.46
SNX7-204ENST00000528824 SLAIN2Q9P270 581 aa12.16□□□□□ -0.46
SNX7-204ENST00000528824 ROBO1Q9Y6N7 1651 aa12.15□□□□□ -0.46
SNX7-204ENST00000528824 MAST1Q9Y2H9 1570 aa12.15□□□□□ -0.46
SNX7-204ENST00000528824 DUOX2Q9NRD8 1548 aa12.14□□□□□ -0.47
SNX7-204ENST00000528824 NKTRP30414 1462 aaKnown RBP12.14□□□□□ -0.47
SNX7-204ENST00000528824 UPF1Q92900 1129 aaKnown RBP eCLIP12.13□□□□□ -0.47
SNX7-204ENST00000528824 PRDM15P57071 1507 aaPredicted RBP12.13□□□□□ -0.47
SNX7-204ENST00000528824 RXRBP28702 533 aa12.13□□□□□ -0.47
SNX7-204ENST00000528824 SLC26A8Q96RN1 970 aa12.13□□□□□ -0.47
SNX7-204ENST00000528824 FGD6Q6ZV73 1430 aa12.13□□□□□ -0.47
SNX7-204ENST00000528824 C14orf37Q86TY3 774 aa12.12□□□□□ -0.47
SNX7-204ENST00000528824 MYOM3Q5VTT5 1437 aa12.12□□□□□ -0.47
SNX7-204ENST00000528824 EFCAB6Q5THR3 1501 aa12.12□□□□□ -0.47
SNX7-204ENST00000528824 XIRP1Q702N8 1843 aaKnown RBP12.11□□□□□ -0.47
SNX7-204ENST00000528824 ERBINQ96RT1 1412 aa12.11□□□□□ -0.47
SNX7-204ENST00000528824 SLC52A1Q9NWF4 448 aa12.11□□□□□ -0.47
SNX7-204ENST00000528824 KDM5AP29375 1690 aaKnown RBP12.11□□□□□ -0.47
SNX7-204ENST00000528824 PHLPP1O60346 1717 aa12.1□□□□□ -0.47
SNX7-204ENST00000528824 NCOA3Q9Y6Q9 1424 aa12.1□□□□□ -0.47
SNX7-204ENST00000528824 TRIM52Q96A61 297 aa12.1□□□□□ -0.47
SNX7-204ENST00000528824 CEP152O94986 1710 aa12.1□□□□□ -0.47
SNX7-204ENST00000528824 CFAP65Q6ZU64 1925 aaKnown RBP12.1□□□□□ -0.47
SNX7-204ENST00000528824 PPP1R15AO75807 674 aaPredicted RBP12.09□□□□□ -0.47
SNX7-204ENST00000528824 CADPS2Q86UW7 1296 aa12.09□□□□□ -0.47
SNX7-204ENST00000528824 ATF3P18847 181 aa12.09□□□□□ -0.47
SNX7-204ENST00000528824 IDI1Q13907 227 aa12.09□□□□□ -0.47
SNX7-204ENST00000528824 KIF15Q9NS87 1388 aa12.09□□□□□ -0.47
SNX7-204ENST00000528824 MAP3K1Q13233 1512 aa12.08□□□□□ -0.48
SNX7-204ENST00000528824 PIK3C2BO00750 1634 aa12.08□□□□□ -0.48
SNX7-204ENST00000528824 MROH1Q8NDA8 1641 aa12.07□□□□□ -0.48
SNX7-204ENST00000528824 RBM33Q96EV2 1170 aaKnown RBP12.07□□□□□ -0.48
SNX7-204ENST00000528824 CDK12Q9NYV4 1490 aaPredicted RBP12.06□□□□□ -0.48
SNX7-204ENST00000528824 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
SNX7-204ENST00000528824 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.06□□□□□ -0.48
SNX7-204ENST00000528824 C19orf44Q9H6X5 657 aa12.06□□□□□ -0.48
SNX7-204ENST00000528824 RRP7BPQ9NSQ0 103 aa12.06□□□□□ -0.48
SNX7-204ENST00000528824 NWD1Q149M9 1564 aa12.06□□□□□ -0.48
SNX7-204ENST00000528824 TET3O43151 1660 aa12.05□□□□□ -0.48
SNX7-204ENST00000528824 TBX22Q9Y458 520 aa12.05□□□□□ -0.48
SNX7-204ENST00000528824 PLEKHG1Q9ULL1 1385 aa12.03□□□□□ -0.48
SNX7-204ENST00000528824 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
SNX7-204ENST00000528824 ADGRB3O60242 1522 aa12.02□□□□□ -0.49
SNX7-204ENST00000528824 LMTK2Q8IWU2 1503 aa12.02□□□□□ -0.49
SNX7-204ENST00000528824 ANKRD30AQ9BXX3 1397 aa12.02□□□□□ -0.49
SNX7-204ENST00000528824 CHRDL2Q6WN34 429 aa12.01□□□□□ -0.49
SNX7-204ENST00000528824 NGLY1Q96IV0 654 aa12.01□□□□□ -0.49
SNX7-204ENST00000528824 COL16A1Q07092 1604 aaPredicted RBP12.01□□□□□ -0.49
SNX7-204ENST00000528824 NUTM2BA6NNL0 878 aaPredicted RBP12.01□□□□□ -0.49
SNX7-204ENST00000528824 NUTM2EB1AL46 878 aaPredicted RBP12.01□□□□□ -0.49
SNX7-204ENST00000528824 NUTM2AQ8IVF1 878 aaPredicted RBP12.01□□□□□ -0.49
SNX7-204ENST00000528824 PIK3R4Q99570 1358 aa12□□□□□ -0.49
SNX7-204ENST00000528824 RBM6P78332 1123 aaKnown RBP12□□□□□ -0.49
SNX7-204ENST00000528824 LRRC59Q96AG4 307 aaKnown RBP12□□□□□ -0.49
SNX7-204ENST00000528824 NOS1P29475 1434 aa11.99□□□□□ -0.49
SNX7-204ENST00000528824 RPRD2Q5VT52 1461 aaKnown RBP11.99□□□□□ -0.49
SNX7-204ENST00000528824 LRP6O75581 1613 aa11.99□□□□□ -0.49
SNX7-204ENST00000528824 AHDC1Q5TGY3 1603 aaPredicted RBP11.99□□□□□ -0.49
SNX7-204ENST00000528824 SHPRHQ149N8 1683 aa11.99□□□□□ -0.49
SNX7-204ENST00000528824 NUTM2DQ5VT03 806 aaPredicted RBP11.99□□□□□ -0.49
SNX7-204ENST00000528824 AFF2P51816 1311 aa11.99□□□□□ -0.49
SNX7-204ENST00000528824 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
SNX7-204ENST00000528824 VPS8Q8N3P4 1428 aa11.97□□□□□ -0.49
SNX7-204ENST00000528824 QTRT2Q9H974 415 aaKnown RBP11.97□□□□□ -0.49
SNX7-204ENST00000528824 RIMS2Q9UQ26 1411 aa11.97□□□□□ -0.49
SNX7-204ENST00000528824 CHD2O14647 1828 aaKnown RBP11.97□□□□□ -0.49
SNX7-204ENST00000528824 ABCC5O15440 1437 aa11.97□□□□□ -0.49
SNX7-204ENST00000528824 CHGAP10645 457 aaKnown RBP11.96□□□□□ -0.49
SNX7-204ENST00000528824 ATAD2Q6PL18 1390 aa11.96□□□□□ -0.5
SNX7-204ENST00000528824 BRINP3Q76B58 766 aa11.96□□□□□ -0.5
SNX7-204ENST00000528824 DCCP43146 1447 aa11.95□□□□□ -0.5
SNX7-204ENST00000528824 DAPK1P53355 1430 aa11.95□□□□□ -0.5
SNX7-204ENST00000528824 C8orf37Q96NL8 207 aa11.95□□□□□ -0.5
SNX7-204ENST00000528824 DIP2AQ14689 1571 aa11.95□□□□□ -0.5
SNX7-204ENST00000528824 ZFYVE9O95405 1425 aa11.94□□□□□ -0.5
SNX7-204ENST00000528824 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
SNX7-204ENST00000528824 CCDC125Q86Z20 511 aa11.94□□□□□ -0.5
SNX7-204ENST00000528824 SETD5Q9C0A6 1442 aa11.94□□□□□ -0.5
SNX7-204ENST00000528824 KANK4Q5T7N3 995 aaPredicted RBP11.93□□□□□ -0.5
SNX7-204ENST00000528824 CHIC2Q9UKJ5 165 aa11.93□□□□□ -0.5
SNX7-204ENST00000528824 AMOTL2Q9Y2J4 779 aa11.93□□□□□ -0.5
SNX7-204ENST00000528824 CROCC2H7BZ55 1655 aa11.93□□□□□ -0.5
SNX7-204ENST00000528824 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.92□□□□□ -0.5
SNX7-204ENST00000528824 PTPN23Q9H3S7 1636 aa11.92□□□□□ -0.5
SNX7-204ENST00000528824 TRPM2O94759 1503 aa11.91□□□□□ -0.5
SNX7-204ENST00000528824 TRPC5Q9UL62 973 aaPredicted RBP11.91□□□□□ -0.5
SNX7-204ENST00000528824 RGS12O14924 1447 aa11.9□□□□□ -0.5
SNX7-204ENST00000528824 ASXL1Q8IXJ9 1541 aa11.88□□□□□ -0.51
SNX7-204ENST00000528824 USP21Q9UK80 565 aa11.88□□□□□ -0.51
SNX7-204ENST00000528824 ADAMTS13Q76LX8 1427 aa11.88□□□□□ -0.51
SNX7-204ENST00000528824 ANKRD50Q9ULJ7 1429 aa11.88□□□□□ -0.51
SNX7-204ENST00000528824 RBM42Q9BTD8 480 aaKnown RBP11.88□□□□□ -0.51
SNX7-204ENST00000528824 TMEM131LA2VDJ0 1609 aa11.87□□□□□ -0.51
SNX7-204ENST00000528824 GCC2Q8IWJ2 1684 aa11.87□□□□□ -0.51
SNX7-204ENST00000528824 ADAMTS2O95450 1211 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms