RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 RRP7AQ9Y3A4 280 aaKnown RBP8.98□□□□□ -0.97
CTNND1-218ENST00000528232 CLUAP1Q96AJ1 413 aa8.98□□□□□ -0.97
CTNND1-218ENST00000528232 APBB1O00213 710 aa8.97□□□□□ -0.97
CTNND1-218ENST00000528232 AMPHP49418 695 aa8.97□□□□□ -0.97
CTNND1-218ENST00000528232 CRBNQ96SW2 442 aa8.97□□□□□ -0.97
CTNND1-218ENST00000528232 ZKSCAN2Q63HK3 967 aa8.97□□□□□ -0.97
CTNND1-218ENST00000528232 MFAP1P55081 439 aaKnown RBP8.97□□□□□ -0.97
CTNND1-218ENST00000528232 TAF3Q5VWG9 929 aa8.97□□□□□ -0.97
CTNND1-218ENST00000528232 NAIPQ13075 1403 aa8.96□□□□□ -0.97
CTNND1-218ENST00000528232 FAM161AQ3B820 660 aa8.96□□□□□ -0.97
CTNND1-218ENST00000528232 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.96□□□□□ -0.97
CTNND1-218ENST00000528232 TPM2P07951 284 aa8.96□□□□□ -0.97
CTNND1-218ENST00000528232 GSE1Q14687 1217 aa8.96□□□□□ -0.97
CTNND1-218ENST00000528232 MINK1Q8N4C8 1332 aaPredicted RBP8.96□□□□□ -0.98
CTNND1-218ENST00000528232 SCAPERQ9BY12 1400 aa8.96□□□□□ -0.98
CTNND1-218ENST00000528232 KIF14Q15058 1648 aa8.96□□□□□ -0.98
CTNND1-218ENST00000528232 GOLGA6L4A6NEF3 574 aa8.96□□□□□ -0.98
CTNND1-218ENST00000528232 GPATCH3Q96I76 525 aa8.96□□□□□ -0.98
CTNND1-218ENST00000528232 APAF1O14727 1248 aa8.95□□□□□ -0.98
CTNND1-218ENST00000528232 CSB-PGBD3P0DP91 1061 aa8.95□□□□□ -0.98
CTNND1-218ENST00000528232 RUNDC1Q96C34 613 aa8.95□□□□□ -0.98
CTNND1-218ENST00000528232 PLIN1O60240 522 aa8.95□□□□□ -0.98
CTNND1-218ENST00000528232 PDE4AP27815 886 aa8.95□□□□□ -0.98
CTNND1-218ENST00000528232 CSPP1Q1MSJ5 1256 aa8.95□□□□□ -0.98
CTNND1-218ENST00000528232 CAMSAP2Q08AD1 1489 aa8.95□□□□□ -0.98
CTNND1-218ENST00000528232 DIAPH1O60610 1272 aaKnown RBP8.94□□□□□ -0.98
CTNND1-218ENST00000528232 NAP1L2Q9ULW6 460 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-218ENST00000528232 RRP9O43818 475 aaKnown RBP8.94□□□□□ -0.98
CTNND1-218ENST00000528232 SLKQ9H2G2 1235 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-218ENST00000528232 MAGI1Q96QZ7 1491 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-218ENST00000528232 NPHP1O15259 732 aa8.94□□□□□ -0.98
CTNND1-218ENST00000528232 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-218ENST00000528232 DRC7Q8IY82 874 aa8.94□□□□□ -0.98
CTNND1-218ENST00000528232 THOC2Q8NI27 1593 aaKnown RBP8.93□□□□□ -0.98
CTNND1-218ENST00000528232 CCDC66A2RUB6 948 aa8.93□□□□□ -0.98
CTNND1-218ENST00000528232 SYAP1Q96A49 352 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-218ENST00000528232 AAMPQ13685 434 aa8.93□□□□□ -0.98
CTNND1-218ENST00000528232 NOM1Q5C9Z4 860 aaKnown RBP8.93□□□□□ -0.98
CTNND1-218ENST00000528232 URB2Q14146 1524 aaKnown RBP8.92□□□□□ -0.98
CTNND1-218ENST00000528232 SLC4A10Q6U841 1118 aa8.92□□□□□ -0.98
CTNND1-218ENST00000528232 GRIN2AQ12879 1464 aa8.92□□□□□ -0.98
CTNND1-218ENST00000528232 CCDC141Q6ZP82 1450 aa8.92□□□□□ -0.98
CTNND1-218ENST00000528232 DDX19BQ9UMR2 479 aa8.92□□□□□ -0.98
CTNND1-218ENST00000528232 NCBP3Q53F19 620 aaKnown RBP8.92□□□□□ -0.98
CTNND1-218ENST00000528232 CYB5RLQ6IPT4 315 aa8.92□□□□□ -0.98
CTNND1-218ENST00000528232 NBPF8Q3BBV2 869 aa8.92□□□□□ -0.98
CTNND1-218ENST00000528232 CTTNBP2Q8WZ74 1663 aa8.92□□□□□ -0.98
CTNND1-218ENST00000528232 COG6Q9Y2V7 657 aa8.91□□□□□ -0.98
CTNND1-218ENST00000528232 TRIM6-TRIM34B2RNG4 842 aa8.91□□□□□ -0.98
CTNND1-218ENST00000528232 AFAP1Q8N556 730 aa8.91□□□□□ -0.98
CTNND1-218ENST00000528232 ERBINQ96RT1 1412 aa8.91□□□□□ -0.98
CTNND1-218ENST00000528232 BCL2L13Q9BXK5 485 aa8.9□□□□□ -0.98
CTNND1-218ENST00000528232 HTATSF1O43719 755 aaKnown RBP8.9□□□□□ -0.98
CTNND1-218ENST00000528232 FAM43AQ8N2R8 423 aa8.9□□□□□ -0.98
CTNND1-218ENST00000528232 RIPK4P57078 832 aa8.9□□□□□ -0.98
CTNND1-218ENST00000528232 AKNAQ7Z591 1439 aa8.9□□□□□ -0.99
CTNND1-218ENST00000528232 DZIP1LQ8IYY4 767 aaKnown RBP8.9□□□□□ -0.99
CTNND1-218ENST00000528232 NUTM2FA1L443 756 aa8.89□□□□□ -0.99
CTNND1-218ENST00000528232 FAM69CQ0P6D2 419 aa8.89□□□□□ -0.99
CTNND1-218ENST00000528232 ZNF771Q7L3S4 317 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-218ENST00000528232 ABCC5O15440 1437 aa8.89□□□□□ -0.99
CTNND1-218ENST00000528232 ST18O60284 1047 aa8.89□□□□□ -0.99
CTNND1-218ENST00000528232 ARHGEF11O15085 1522 aa8.89□□□□□ -0.99
CTNND1-218ENST00000528232 DDX11L8A8MPP1 907 aa8.89□□□□□ -0.99
CTNND1-218ENST00000528232 PPP2R1AP30153 589 aa8.89□□□□□ -0.99
CTNND1-218ENST00000528232 KIF16BQ96L93 1317 aa8.89□□□□□ -0.99
CTNND1-218ENST00000528232 SKOR2Q2VWA4 1001 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-218ENST00000528232 LTV1Q96GA3 475 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-218ENST00000528232 API5Q9BZZ5 524 aaKnown RBP8.89□□□□□ -0.99
CTNND1-218ENST00000528232 TAOK2Q9UL54 1235 aa8.89□□□□□ -0.99
CTNND1-218ENST00000528232 TEX35Q5T0J7 233 aa8.89□□□□□ -0.99
CTNND1-218ENST00000528232 ANKRD45Q5TZF3 282 aa8.88□□□□□ -0.99
CTNND1-218ENST00000528232 GNAI1P63096 354 aa8.88□□□□□ -0.99
CTNND1-218ENST00000528232 ADAMTS8Q9UP79 889 aa8.87□□□□□ -0.99
CTNND1-218ENST00000528232 SMG6Q86US8 1419 aaKnown RBP8.87□□□□□ -0.99
CTNND1-218ENST00000528232 GPS2Q13227 327 aa8.87□□□□□ -0.99
CTNND1-218ENST00000528232 NBPF1Q3BBV0 1214 aa8.87□□□□□ -0.99
CTNND1-218ENST00000528232 C1orf141Q5JVX7 400 aa8.87□□□□□ -0.99
CTNND1-218ENST00000528232 CFAP70Q5T0N1 1121 aa8.87□□□□□ -0.99
CTNND1-218ENST00000528232 ANKRD30BQ9BXX2 1392 aa8.87□□□□□ -0.99
CTNND1-218ENST00000528232 TSPYL1Q9H0U9 437 aa8.87□□□□□ -0.99
CTNND1-218ENST00000528232 CABP2Q9NPB3 220 aa8.87□□□□□ -0.99
CTNND1-218ENST00000528232 ELL2O00472 640 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-218ENST00000528232 ITSN2Q9NZM3 1697 aa8.86□□□□□ -0.99
CTNND1-218ENST00000528232 GNL2Q13823 731 aaKnown RBP8.86□□□□□ -0.99
CTNND1-218ENST00000528232 RPGRIP1LQ68CZ1 1315 aa8.86□□□□□ -0.99
CTNND1-218ENST00000528232 PLB1Q6P1J6 1458 aa8.86□□□□□ -0.99
CTNND1-218ENST00000528232 CFAP43Q8NDM7 1665 aa8.86□□□□□ -0.99
CTNND1-218ENST00000528232 GZF1Q9H116 711 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-218ENST00000528232 PDE4CQ08493 712 aa8.86□□□□□ -0.99
CTNND1-218ENST00000528232 GORABQ5T7V8 394 aa8.85□□□□□ -0.99
CTNND1-218ENST00000528232 TMEM132EQ6IEE7 984 aa8.85□□□□□ -0.99
CTNND1-218ENST00000528232 RAPGEF6Q8TEU7 1601 aa8.85□□□□□ -0.99
CTNND1-218ENST00000528232 PHF14O94880 888 aa8.85□□□□□ -0.99
CTNND1-218ENST00000528232 CHMP3Q9Y3E7 222 aa8.85□□□□□ -0.99
CTNND1-218ENST00000528232 NINLQ9Y2I6 1382 aa8.85□□□□□ -0.99
CTNND1-218ENST00000528232 ANO8Q9HCE9 1232 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-218ENST00000528232 TAF7LQ5H9L4 462 aa8.85□□□□□ -0.99
CTNND1-218ENST00000528232 CWC15Q9P013 229 aaKnown RBP8.85□□□□□ -0.99
CTNND1-218ENST00000528232 ZNF330Q9Y3S2 320 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms