RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 KCNA6P17658 529 aa17.45■□□□□ 0.38
CCDC90B-210ENST00000528149 MEX3CQ5U5Q3 659 aaKnown RBP17.45■□□□□ 0.38
CCDC90B-210ENST00000528149 PROSER2Q86WR7 435 aaPredicted RBP17.45■□□□□ 0.38
CCDC90B-210ENST00000528149 NWD1Q149M9 1564 aa17.45■□□□□ 0.38
CCDC90B-210ENST00000528149 PIK3C2BO00750 1634 aa17.44■□□□□ 0.38
CCDC90B-210ENST00000528149 NKTRP30414 1462 aaKnown RBP17.44■□□□□ 0.38
CCDC90B-210ENST00000528149 TMEM2Q9UHN6 1383 aa17.43■□□□□ 0.38
CCDC90B-210ENST00000528149 EFCAB6Q5THR3 1501 aa17.43■□□□□ 0.38
CCDC90B-210ENST00000528149 NAIPQ13075 1403 aa17.43■□□□□ 0.38
CCDC90B-210ENST00000528149 SPATA31A6Q5VVP1 1343 aa17.43■□□□□ 0.38
CCDC90B-210ENST00000528149 CDK12Q9NYV4 1490 aaPredicted RBP17.43■□□□□ 0.38
CCDC90B-210ENST00000528149 LMTK2Q8IWU2 1503 aa17.42■□□□□ 0.38
CCDC90B-210ENST00000528149 MSH6P52701 1360 aa17.42■□□□□ 0.38
CCDC90B-210ENST00000528149 SLAIN2Q9P270 581 aa17.42■□□□□ 0.38
CCDC90B-210ENST00000528149 RXRBP28702 533 aa17.41■□□□□ 0.38
CCDC90B-210ENST00000528149 TET3O43151 1660 aa17.41■□□□□ 0.38
CCDC90B-210ENST00000528149 SHPRHQ149N8 1683 aa17.4■□□□□ 0.38
CCDC90B-210ENST00000528149 SLC26A8Q96RN1 970 aa17.4■□□□□ 0.38
CCDC90B-210ENST00000528149 IQGAP3Q86VI3 1631 aa17.39■□□□□ 0.38
CCDC90B-210ENST00000528149 E9PCH4 1651 aa17.39■□□□□ 0.37
CCDC90B-210ENST00000528149 HFM1A2PYH4 1435 aa17.38■□□□□ 0.37
CCDC90B-210ENST00000528149 KDM5AP29375 1690 aaKnown RBP17.38■□□□□ 0.37
CCDC90B-210ENST00000528149 RGS12O14924 1447 aa17.36■□□□□ 0.37
CCDC90B-210ENST00000528149 ARHGAP31Q2M1Z3 1444 aa17.36■□□□□ 0.37
CCDC90B-210ENST00000528149 AHDC1Q5TGY3 1603 aaPredicted RBP17.36■□□□□ 0.37
CCDC90B-210ENST00000528149 TRIM26Q12899 539 aaPredicted RBP17.35■□□□□ 0.37
CCDC90B-210ENST00000528149 KANK1Q14678 1352 aa17.35■□□□□ 0.37
CCDC90B-210ENST00000528149 STAG3Q9UJ98 1225 aa17.33■□□□□ 0.36
CCDC90B-210ENST00000528149 NOS1P29475 1434 aa17.32■□□□□ 0.36
CCDC90B-210ENST00000528149 NUP155O75694 1391 aa17.32■□□□□ 0.36
CCDC90B-210ENST00000528149 DIP2AQ14689 1571 aa17.32■□□□□ 0.36
CCDC90B-210ENST00000528149 AFF2P51816 1311 aa17.3■□□□□ 0.36
CCDC90B-210ENST00000528149 MYO5BQ9ULV0 1848 aa17.3■□□□□ 0.36
CCDC90B-210ENST00000528149 SETD5Q9C0A6 1442 aa17.29■□□□□ 0.36
CCDC90B-210ENST00000528149 CHD2O14647 1828 aaKnown RBP17.28■□□□□ 0.36
CCDC90B-210ENST00000528149 SETBP1Q9Y6X0 1596 aa17.28■□□□□ 0.36
CCDC90B-210ENST00000528149 NUTM2BA6NNL0 878 aaPredicted RBP17.28■□□□□ 0.36
CCDC90B-210ENST00000528149 NUTM2EB1AL46 878 aaPredicted RBP17.28■□□□□ 0.36
CCDC90B-210ENST00000528149 NUTM2AQ8IVF1 878 aaPredicted RBP17.28■□□□□ 0.36
CCDC90B-210ENST00000528149 ADGRB3O60242 1522 aa17.27■□□□□ 0.36
CCDC90B-210ENST00000528149 IDI1Q13907 227 aa17.26■□□□□ 0.35
CCDC90B-210ENST00000528149 RAB3GAP2Q9H2M9 1393 aa17.26■□□□□ 0.35
CCDC90B-210ENST00000528149 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.25■□□□□ 0.35
CCDC90B-210ENST00000528149 SPHKAPQ2M3C7 1700 aa17.24■□□□□ 0.35
CCDC90B-210ENST00000528149 NUTM2DQ5VT03 806 aaPredicted RBP17.24■□□□□ 0.35
CCDC90B-210ENST00000528149 BCANQ96GW7 911 aa17.24■□□□□ 0.35
CCDC90B-210ENST00000528149 FOXD1Q16676 465 aa17.23■□□□□ 0.35
CCDC90B-210ENST00000528149 RPRD2Q5VT52 1461 aaKnown RBP17.23■□□□□ 0.35
CCDC90B-210ENST00000528149 NCOA3Q9Y6Q9 1424 aa17.22■□□□□ 0.35
CCDC90B-210ENST00000528149 CLTCL1P53675 1640 aa17.22■□□□□ 0.35
CCDC90B-210ENST00000528149 RBM6P78332 1123 aaKnown RBP17.22■□□□□ 0.35
CCDC90B-210ENST00000528149 C14orf37Q86TY3 774 aa17.22■□□□□ 0.35
CCDC90B-210ENST00000528149 ZRANB1Q9UGI0 708 aa17.22■□□□□ 0.35
CCDC90B-210ENST00000528149 TMEM131LA2VDJ0 1609 aa17.21■□□□□ 0.35
CCDC90B-210ENST00000528149 ATAD2Q6PL18 1390 aa17.21■□□□□ 0.35
CCDC90B-210ENST00000528149 BRINP3Q76B58 766 aa17.2■□□□□ 0.34
CCDC90B-210ENST00000528149 CADPS2Q86UW7 1296 aa17.2■□□□□ 0.34
CCDC90B-210ENST00000528149 C8orf37Q96NL8 207 aa17.2■□□□□ 0.34
CCDC90B-210ENST00000528149 PCGF6Q9BYE7 350 aa17.2■□□□□ 0.34
CCDC90B-210ENST00000528149 QTRT2Q9H974 415 aaKnown RBP17.2■□□□□ 0.34
CCDC90B-210ENST00000528149 EP400Q96L91 3159 aa17.2■□□□□ 0.34
CCDC90B-210ENST00000528149 PLEKHG1Q9ULL1 1385 aa17.19■□□□□ 0.34
CCDC90B-210ENST00000528149 ZFYVE9O95405 1425 aa17.19■□□□□ 0.34
CCDC90B-210ENST00000528149 ASXL1Q8IXJ9 1541 aa17.18■□□□□ 0.34
CCDC90B-210ENST00000528149 ATF3P18847 181 aa17.17■□□□□ 0.34
CCDC90B-210ENST00000528149 C19orf44Q9H6X5 657 aa17.16■□□□□ 0.34
CCDC90B-210ENST00000528149 NHSL1Q5SYE7 1610 aa17.15■□□□□ 0.34
CCDC90B-210ENST00000528149 TRPM2O94759 1503 aa17.15■□□□□ 0.34
CCDC90B-210ENST00000528149 RIMS2Q9UQ26 1411 aa17.13■□□□□ 0.33
CCDC90B-210ENST00000528149 PPP1R15AO75807 674 aaPredicted RBP17.13■□□□□ 0.33
CCDC90B-210ENST00000528149 CHGAP10645 457 aaKnown RBP17.13■□□□□ 0.33
CCDC90B-210ENST00000528149 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
CCDC90B-210ENST00000528149 PNPLA6Q8IY17 1366 aa17.12■□□□□ 0.33
CCDC90B-210ENST00000528149 ADAMTS13Q76LX8 1427 aa17.12■□□□□ 0.33
CCDC90B-210ENST00000528149 NGLY1Q96IV0 654 aa17.11■□□□□ 0.33
CCDC90B-210ENST00000528149 TBX22Q9Y458 520 aa17.11■□□□□ 0.33
CCDC90B-210ENST00000528149 SLC52A1Q9NWF4 448 aa17.09■□□□□ 0.33
CCDC90B-210ENST00000528149 DCCP43146 1447 aa17.09■□□□□ 0.33
CCDC90B-210ENST00000528149 MST1RQ04912 1400 aa17.08■□□□□ 0.32
CCDC90B-210ENST00000528149 MPHOSPH9Q99550 1183 aa17.08■□□□□ 0.32
CCDC90B-210ENST00000528149 ADAMTS2O95450 1211 aa17.07■□□□□ 0.32
CCDC90B-210ENST00000528149 DDX17Q92841 729 aaKnown RBP17.07■□□□□ 0.32
CCDC90B-210ENST00000528149 LRRC59Q96AG4 307 aaKnown RBP17.07■□□□□ 0.32
CCDC90B-210ENST00000528149 HRCP23327 699 aa17.06■□□□□ 0.32
CCDC90B-210ENST00000528149 LRP5O75197 1615 aa17.06■□□□□ 0.32
CCDC90B-210ENST00000528149 NEXMIFQ5QGS0 1516 aa17.06■□□□□ 0.32
CCDC90B-210ENST00000528149 PTPRUQ92729 1446 aa17.05■□□□□ 0.32
CCDC90B-210ENST00000528149 PIK3R4Q99570 1358 aa17.05■□□□□ 0.32
CCDC90B-210ENST00000528149 NRXN3Q9Y4C0 1643 aa17.05■□□□□ 0.32
CCDC90B-210ENST00000528149 ACIN1Q9UKV3 1341 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-210ENST00000528149 KIF1BO60333 1816 aa17.03■□□□□ 0.32
CCDC90B-210ENST00000528149 USP21Q9UK80 565 aa17.03■□□□□ 0.32
CCDC90B-210ENST00000528149 TRPC5Q9UL62 973 aaPredicted RBP17.03■□□□□ 0.32
CCDC90B-210ENST00000528149 ATRNO75882 1429 aa17.03■□□□□ 0.32
CCDC90B-210ENST00000528149 XRN1Q8IZH2 1706 aaKnown RBP17.01■□□□□ 0.31
CCDC90B-210ENST00000528149 HDGFP51858 240 aaKnown RBP17.01■□□□□ 0.31
CCDC90B-210ENST00000528149 CCDC125Q86Z20 511 aa17.01■□□□□ 0.31
CCDC90B-210ENST00000528149 AMOTL2Q9Y2J4 779 aa17.01■□□□□ 0.31
CCDC90B-210ENST00000528149 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.99■□□□□ 0.31
CCDC90B-210ENST00000528149 DHX57Q6P158 1386 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms