RNA–Protein interactions for RNA: ENST00000527537.5

RDX-203, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-203ENST00000527537 L3MBTL2Q969R5 705 aa8.42□□□□□ -1.06
RDX-203ENST00000527537 DNAJC2Q99543 621 aaKnown RBP8.42□□□□□ -1.06
RDX-203ENST00000527537 ZNF710Q8N1W2 664 aa8.41□□□□□ -1.06
RDX-203ENST00000527537 UGGT2Q9NYU1 1516 aa8.41□□□□□ -1.06
RDX-203ENST00000527537 SKOR2Q2VWA4 1001 aaPredicted RBP8.41□□□□□ -1.06
RDX-203ENST00000527537 PANK3Q9H999 370 aa8.41□□□□□ -1.06
RDX-203ENST00000527537 UPF2Q9HAU5 1272 aaKnown RBP8.41□□□□□ -1.06
RDX-203ENST00000527537 KDM6BO15054 1643 aa8.41□□□□□ -1.06
RDX-203ENST00000527537 MCM5P33992 734 aa8.41□□□□□ -1.06
RDX-203ENST00000527537 MAPK8IP2Q13387 824 aaPredicted RBP8.41□□□□□ -1.06
RDX-203ENST00000527537 POLR3GLQ9BT43 218 aa8.41□□□□□ -1.06
RDX-203ENST00000527537 KIF21AQ7Z4S6 1674 aa8.4□□□□□ -1.06
RDX-203ENST00000527537 MYRIPQ8NFW9 859 aa8.4□□□□□ -1.06
RDX-203ENST00000527537 ZKSCAN5Q9Y2L8 839 aa8.4□□□□□ -1.06
RDX-203ENST00000527537 ZNF644Q9H582 1327 aaPredicted RBP8.4□□□□□ -1.06
RDX-203ENST00000527537 ROCK2O75116 1388 aaKnown RBP8.4□□□□□ -1.07
RDX-203ENST00000527537 ZNF692Q9BU19 519 aaPredicted RBP8.39□□□□□ -1.07
RDX-203ENST00000527537 MYBBP1AQ9BQG0 1328 aaKnown RBP8.39□□□□□ -1.07
RDX-203ENST00000527537 EPRSP07814 1512 aaKnown RBP8.39□□□□□ -1.07
RDX-203ENST00000527537 NBPF8Q3BBV2 869 aa8.39□□□□□ -1.07
RDX-203ENST00000527537 MAPK8IP3Q9UPT6 1336 aa8.39□□□□□ -1.07
RDX-203ENST00000527537 KCNJ4P48050 445 aa8.39□□□□□ -1.07
RDX-203ENST00000527537 MIA2Q96PC5 1412 aa8.38□□□□□ -1.07
RDX-203ENST00000527537 PDLIM2Q96JY6 352 aa8.38□□□□□ -1.07
RDX-203ENST00000527537 IBTKQ9P2D0 1353 aaPredicted RBP8.38□□□□□ -1.07
RDX-203ENST00000527537 THOC2Q8NI27 1593 aaKnown RBP8.38□□□□□ -1.07
RDX-203ENST00000527537 IGSF3O75054 1194 aa8.38□□□□□ -1.07
RDX-203ENST00000527537 NBPF1Q3BBV0 1214 aa8.38□□□□□ -1.07
RDX-203ENST00000527537 ZNF777Q9ULD5 760 aaPredicted RBP8.38□□□□□ -1.07
RDX-203ENST00000527537 DENND4BO75064 1496 aaPredicted RBP8.38□□□□□ -1.07
RDX-203ENST00000527537 PTMSP20962 102 aa8.38□□□□□ -1.07
RDX-203ENST00000527537 MMP14P50281 582 aa8.38□□□□□ -1.07
RDX-203ENST00000527537 ZNF771Q7L3S4 317 aaPredicted RBP8.38□□□□□ -1.07
RDX-203ENST00000527537 CERS3Q8IU89 383 aa8.38□□□□□ -1.07
RDX-203ENST00000527537 SLC4A1APQ9BWU0 796 aaKnown RBP8.38□□□□□ -1.07
RDX-203ENST00000527537 HECW1Q76N89 1606 aa8.37□□□□□ -1.07
RDX-203ENST00000527537 SAMD1Q6SPF0 538 aaPredicted RBP8.37□□□□□ -1.07
RDX-203ENST00000527537 BCCIPQ9P287 314 aaKnown RBP eCLIP8.37□□□□□ -1.07
RDX-203ENST00000527537 KIF15Q9NS87 1388 aa8.37□□□□□ -1.07
RDX-203ENST00000527537 IQGAP2Q13576 1575 aa8.37□□□□□ -1.07
RDX-203ENST00000527537 GTF2F1P35269 517 aaKnown RBP eCLIP8.37□□□□□ -1.07
RDX-203ENST00000527537 JARID2Q92833 1246 aaPredicted RBP8.37□□□□□ -1.07
RDX-203ENST00000527537 TNPO1Q92973 898 aaKnown RBP8.37□□□□□ -1.07
RDX-203ENST00000527537 GBP4Q96PP9 640 aa8.37□□□□□ -1.07
RDX-203ENST00000527537 SCAPERQ9BY12 1400 aa8.37□□□□□ -1.07
RDX-203ENST00000527537 SPDYE4A6NLX3 237 aa8.36□□□□□ -1.07
RDX-203ENST00000527537 DDIT3P35638 169 aa8.36□□□□□ -1.07
RDX-203ENST00000527537 RALBP1Q15311 655 aa8.36□□□□□ -1.07
RDX-203ENST00000527537 BCORL1Q5H9F3 1711 aa8.36□□□□□ -1.07
RDX-203ENST00000527537 TSC1Q92574 1164 aa8.36□□□□□ -1.07
RDX-203ENST00000527537 ARHGEF11O15085 1522 aa8.36□□□□□ -1.07
RDX-203ENST00000527537 TARBP1Q13395 1621 aaKnown RBP8.36□□□□□ -1.07
RDX-203ENST00000527537 PRIMPOLQ96LW4 560 aa8.36□□□□□ -1.07
RDX-203ENST00000527537 IGHDP01880 384 aa8.35□□□□□ -1.07
RDX-203ENST00000527537 TCOF1Q13428 1488 aaKnown RBP8.35□□□□□ -1.07
RDX-203ENST00000527537 NCOA3Q9Y6Q9 1424 aa8.35□□□□□ -1.07
RDX-203ENST00000527537 EIF3AQ14152 1382 aaKnown RBP8.35□□□□□ -1.07
RDX-203ENST00000527537 RBM25P49756 843 aaKnown RBP8.35□□□□□ -1.07
RDX-203ENST00000527537 FBLN2P98095 1184 aa8.35□□□□□ -1.07
RDX-203ENST00000527537 HMGN5P82970 282 aaKnown RBP8.35□□□□□ -1.07
RDX-203ENST00000527537 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.35□□□□□ -1.07
RDX-203ENST00000527537 PBRM1Q86U86 1689 aa8.35□□□□□ -1.07
RDX-203ENST00000527537 GCC2Q8IWJ2 1684 aa8.34□□□□□ -1.07
RDX-203ENST00000527537 AEBP1Q8IUX7 1158 aa8.34□□□□□ -1.07
RDX-203ENST00000527537 HSP90AB1P08238 724 aaKnown RBP8.33□□□□□ -1.08
RDX-203ENST00000527537 TIGD1Q96MW7 591 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 CCDC144AA2RUR9 1427 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 CCDC66A2RUB6 948 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 TULP2O00295 520 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 PSEN1P49768 467 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 PDCL2Q8N4E4 241 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 SLC52A1Q9NWF4 448 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 CCDC39Q9UFE4 941 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 HDAC5Q9UQL6 1122 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 PLEKHH2Q8IVE3 1493 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 DAPK1P53355 1430 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 INSRP06213 1382 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 WDR62O43379 1518 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 ZNF608Q9ULD9 1512 aaPredicted RBP8.33□□□□□ -1.08
RDX-203ENST00000527537 ZNF445P59923 1031 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 RAB3GAP1Q15042 981 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 NLRP13Q86W25 1043 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 KCNG1Q9UIX4 513 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 CIZ1Q9ULV3 898 aaPredicted RBP8.33□□□□□ -1.08
RDX-203ENST00000527537 KIF3AQ9Y496 699 aa8.33□□□□□ -1.08
RDX-203ENST00000527537 BLMP54132 1417 aaPredicted RBP8.33□□□□□ -1.08
RDX-203ENST00000527537 TEX14Q8IWB6 1497 aa8.32□□□□□ -1.08
RDX-203ENST00000527537 CAPN2P17655 700 aa8.32□□□□□ -1.08
RDX-203ENST00000527537 GABPB1Q06547 395 aaPredicted RBP8.32□□□□□ -1.08
RDX-203ENST00000527537 KLHL40Q2TBA0 621 aa8.32□□□□□ -1.08
RDX-203ENST00000527537 RTEL1-TNFRSF6BF6WH68 1400 aa8.32□□□□□ -1.08
RDX-203ENST00000527537 ZMYM3Q14202 1370 aa8.32□□□□□ -1.08
RDX-203ENST00000527537 NINLQ9Y2I6 1382 aa8.32□□□□□ -1.08
RDX-203ENST00000527537 ADAMTS12P58397 1594 aa8.32□□□□□ -1.08
RDX-203ENST00000527537 CLGNO14967 610 aa8.32□□□□□ -1.08
RDX-203ENST00000527537 SOX12O15370 315 aa8.32□□□□□ -1.08
RDX-203ENST00000527537 HSCBQ8IWL3 235 aa8.32□□□□□ -1.08
RDX-203ENST00000527537 FEZ1Q99689 392 aa8.32□□□□□ -1.08
RDX-203ENST00000527537 CFDP1Q9UEE9 299 aaPredicted RBP8.32□□□□□ -1.08
RDX-203ENST00000527537 ZMYM4Q5VZL5 1548 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms