RNA–Protein interactions for RNA: ENST00000526955.1

PKNOX2-202, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 1 (best)

Gene PKNOX2, Length 4,531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-202ENST00000526955 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
PKNOX2-202ENST00000526955 TNNT2P45379 298 aaPredicted RBP13.05□□□□□ -0.32
PKNOX2-202ENST00000526955 TRIM44Q96DX7 344 aaPredicted RBP13.05□□□□□ -0.32
PKNOX2-202ENST00000526955 ZMYM4Q5VZL5 1548 aa13.05□□□□□ -0.32
PKNOX2-202ENST00000526955 ADGRL2O95490 1459 aa13.05□□□□□ -0.32
PKNOX2-202ENST00000526955 ADGBQ8N7X0 1667 aa13.05□□□□□ -0.32
PKNOX2-202ENST00000526955 NINLQ9Y2I6 1382 aa13.05□□□□□ -0.32
PKNOX2-202ENST00000526955 RTF1Q92541 710 aaKnown RBP13.04□□□□□ -0.32
PKNOX2-202ENST00000526955 SLKQ9H2G2 1235 aaPredicted RBP13.04□□□□□ -0.32
PKNOX2-202ENST00000526955 ADAMTS8Q9UP79 889 aa13.03□□□□□ -0.32
PKNOX2-202ENST00000526955 KIAA0586Q9BVV6 1533 aa13.03□□□□□ -0.32
PKNOX2-202ENST00000526955 CHMP4AQ9BY43 222 aa13.03□□□□□ -0.32
PKNOX2-202ENST00000526955 NEUROD2Q15784 382 aa13.03□□□□□ -0.32
PKNOX2-202ENST00000526955 PRG4Q92954 1404 aaPredicted RBP13.02□□□□□ -0.32
PKNOX2-202ENST00000526955 ERBINQ96RT1 1412 aa13.02□□□□□ -0.32
PKNOX2-202ENST00000526955 ZNF330Q9Y3S2 320 aaPredicted RBP13.02□□□□□ -0.33
PKNOX2-202ENST00000526955 CENPJQ9HC77 1338 aaPredicted RBP13.02□□□□□ -0.33
PKNOX2-202ENST00000526955 BLMP54132 1417 aaPredicted RBP13.02□□□□□ -0.33
PKNOX2-202ENST00000526955 BCORL1Q5H9F3 1711 aa13.02□□□□□ -0.33
PKNOX2-202ENST00000526955 PTMSP20962 102 aa13.01□□□□□ -0.33
PKNOX2-202ENST00000526955 RWDD1Q9H446 243 aaPredicted RBP13.01□□□□□ -0.33
PKNOX2-202ENST00000526955 RAPGEF6Q8TEU7 1601 aa13.01□□□□□ -0.33
PKNOX2-202ENST00000526955 OS9Q13438 667 aaPredicted RBP13.01□□□□□ -0.33
PKNOX2-202ENST00000526955 CHMP4BQ9H444 224 aaKnown RBP13.01□□□□□ -0.33
PKNOX2-202ENST00000526955 KDM2BQ8NHM5 1336 aa13□□□□□ -0.33
PKNOX2-202ENST00000526955 PDE3AQ14432 1141 aa13□□□□□ -0.33
PKNOX2-202ENST00000526955 C8orf34Q49A92 452 aa12.99□□□□□ -0.33
PKNOX2-202ENST00000526955 HSCBQ8IWL3 235 aa12.99□□□□□ -0.33
PKNOX2-202ENST00000526955 GPATCH8Q9UKJ3 1502 aaKnown RBP12.99□□□□□ -0.33
PKNOX2-202ENST00000526955 PPP2R1AP30153 589 aa12.99□□□□□ -0.33
PKNOX2-202ENST00000526955 NUP153P49790 1475 aaKnown RBP12.98□□□□□ -0.33
PKNOX2-202ENST00000526955 SHANK2Q9UPX8 1470 aa12.98□□□□□ -0.33
PKNOX2-202ENST00000526955 C20orf194Q5TEA3 1177 aa12.98□□□□□ -0.33
PKNOX2-202ENST00000526955 FTSJ3Q8IY81 847 aaKnown RBP12.98□□□□□ -0.33
PKNOX2-202ENST00000526955 CLUAP1Q96AJ1 413 aa12.98□□□□□ -0.33
PKNOX2-202ENST00000526955 HNRNPMP52272 730 aaKnown RBP eCLIP12.97□□□□□ -0.33
PKNOX2-202ENST00000526955 DUSP27Q5VZP5 1158 aa12.97□□□□□ -0.33
PKNOX2-202ENST00000526955 STAC3Q96MF2 364 aa12.97□□□□□ -0.33
PKNOX2-202ENST00000526955 DDX11L8A8MPP1 907 aa12.97□□□□□ -0.33
PKNOX2-202ENST00000526955 G3V3G9 751 aa12.97□□□□□ -0.33
PKNOX2-202ENST00000526955 GOLGA6L22H0YM25 854 aa12.97□□□□□ -0.33
PKNOX2-202ENST00000526955 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
PKNOX2-202ENST00000526955 GTF2E1P29083 439 aaPredicted RBP12.97□□□□□ -0.33
PKNOX2-202ENST00000526955 EVA1CP58658 441 aa12.97□□□□□ -0.33
PKNOX2-202ENST00000526955 SLFN5Q08AF3 891 aa12.97□□□□□ -0.33
PKNOX2-202ENST00000526955 MORC1Q86VD1 984 aa12.97□□□□□ -0.33
PKNOX2-202ENST00000526955 ADAMTS12P58397 1594 aa12.96□□□□□ -0.33
PKNOX2-202ENST00000526955 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
PKNOX2-202ENST00000526955 SKAP1Q86WV1 359 aa12.95□□□□□ -0.34
PKNOX2-202ENST00000526955 KIAA0556O60303 1618 aa12.95□□□□□ -0.34
PKNOX2-202ENST00000526955 COL17A1Q9UMD9 1497 aaPredicted RBP12.95□□□□□ -0.34
PKNOX2-202ENST00000526955 PER1O15534 1290 aaPredicted RBP12.95□□□□□ -0.34
PKNOX2-202ENST00000526955 NBPF1Q3BBV0 1214 aa12.95□□□□□ -0.34
PKNOX2-202ENST00000526955 CCDC146Q8IYE0 955 aa12.95□□□□□ -0.34
PKNOX2-202ENST00000526955 CHMP5Q9NZZ3 219 aa12.95□□□□□ -0.34
PKNOX2-202ENST00000526955 NKTRP30414 1462 aaKnown RBP12.95□□□□□ -0.34
PKNOX2-202ENST00000526955 ISY1Q9ULR0 285 aaKnown RBP12.94□□□□□ -0.34
PKNOX2-202ENST00000526955 APAF1O14727 1248 aa12.94□□□□□ -0.34
PKNOX2-202ENST00000526955 HSP90AA2PQ14568 343 aaPredicted RBP12.94□□□□□ -0.34
PKNOX2-202ENST00000526955 TERF2IPQ9NYB0 399 aa12.94□□□□□ -0.34
PKNOX2-202ENST00000526955 EIF2AK4Q9P2K8 1649 aaKnown RBP12.94□□□□□ -0.34
PKNOX2-202ENST00000526955 GBP4Q96PP9 640 aa12.94□□□□□ -0.34
PKNOX2-202ENST00000526955 MRE11P49959 708 aa12.93□□□□□ -0.34
PKNOX2-202ENST00000526955 NUP160Q12769 1436 aa12.93□□□□□ -0.34
PKNOX2-202ENST00000526955 PBRM1Q86U86 1689 aa12.92□□□□□ -0.34
PKNOX2-202ENST00000526955 CASC1Q6TDU7 716 aa12.92□□□□□ -0.34
PKNOX2-202ENST00000526955 COG6Q9Y2V7 657 aa12.92□□□□□ -0.34
PKNOX2-202ENST00000526955 ATF3P18847 181 aa12.92□□□□□ -0.34
PKNOX2-202ENST00000526955 IFT140Q96RY7 1462 aa12.91□□□□□ -0.34
PKNOX2-202ENST00000526955 NUTM2FA1L443 756 aa12.91□□□□□ -0.34
PKNOX2-202ENST00000526955 AMPHP49418 695 aa12.91□□□□□ -0.34
PKNOX2-202ENST00000526955 PDE4CQ08493 712 aa12.91□□□□□ -0.34
PKNOX2-202ENST00000526955 GZF1Q9H116 711 aaPredicted RBP12.91□□□□□ -0.34
PKNOX2-202ENST00000526955 DNAJC5BQ9UF47 199 aa12.91□□□□□ -0.34
PKNOX2-202ENST00000526955 SCAPERQ9BY12 1400 aa12.91□□□□□ -0.34
PKNOX2-202ENST00000526955 TULP1O00294 542 aaPredicted RBP12.91□□□□□ -0.34
PKNOX2-202ENST00000526955 DISP3Q9P2K9 1392 aa12.91□□□□□ -0.34
PKNOX2-202ENST00000526955 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
PKNOX2-202ENST00000526955 HSP90AB1P08238 724 aaKnown RBP12.9□□□□□ -0.34
PKNOX2-202ENST00000526955 SKOR2Q2VWA4 1001 aaPredicted RBP12.9□□□□□ -0.34
PKNOX2-202ENST00000526955 FGD1P98174 961 aa12.9□□□□□ -0.34
PKNOX2-202ENST00000526955 CCDC141Q6ZP82 1450 aa12.89□□□□□ -0.35
PKNOX2-202ENST00000526955 KDM5DQ9BY66 1539 aa12.89□□□□□ -0.35
PKNOX2-202ENST00000526955 VGFO15240 615 aaPredicted RBP12.89□□□□□ -0.35
PKNOX2-202ENST00000526955 PDIA4P13667 645 aaKnown RBP12.89□□□□□ -0.35
PKNOX2-202ENST00000526955 SF3B2Q13435 895 aaKnown RBP12.89□□□□□ -0.35
PKNOX2-202ENST00000526955 MRC2Q9UBG0 1479 aa12.89□□□□□ -0.35
PKNOX2-202ENST00000526955 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
PKNOX2-202ENST00000526955 SPRYD3Q8NCJ5 442 aa12.88□□□□□ -0.35
PKNOX2-202ENST00000526955 CEP170Q5SW79 1584 aa12.88□□□□□ -0.35
PKNOX2-202ENST00000526955 MAGI1Q96QZ7 1491 aaPredicted RBP12.88□□□□□ -0.35
PKNOX2-202ENST00000526955 BCAR3O75815 825 aa12.88□□□□□ -0.35
PKNOX2-202ENST00000526955 CALD1Q05682 793 aaKnown RBP12.87□□□□□ -0.35
PKNOX2-202ENST00000526955 MCM4P33991 863 aa12.87□□□□□ -0.35
PKNOX2-202ENST00000526955 MFAP1P55081 439 aaKnown RBP12.87□□□□□ -0.35
PKNOX2-202ENST00000526955 PIK3C2GO75747 1445 aa12.87□□□□□ -0.35
PKNOX2-202ENST00000526955 FAM135AQ9P2D6 1515 aa12.87□□□□□ -0.35
PKNOX2-202ENST00000526955 RRP9O43818 475 aaKnown RBP12.87□□□□□ -0.35
PKNOX2-202ENST00000526955 NUTM2DQ5VT03 806 aaPredicted RBP12.87□□□□□ -0.35
PKNOX2-202ENST00000526955 TESK2Q96S53 571 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms