RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 PRKD2Q9BZL6 878 aa10.18□□□□□ -0.78
CSDE1-211ENST00000525970 TMEM134Q9H6X4 195 aa10.18□□□□□ -0.78
CSDE1-211ENST00000525970 COPS2P61201 443 aa10.17□□□□□ -0.78
CSDE1-211ENST00000525970 Q6ZNB5 142 aa10.17□□□□□ -0.78
CSDE1-211ENST00000525970 SEMA3EO15041 775 aa10.16□□□□□ -0.78
CSDE1-211ENST00000525970 TMUB1Q9BVT8 246 aa10.16□□□□□ -0.78
CSDE1-211ENST00000525970 PCDHB3Q9Y5E6 796 aa10.16□□□□□ -0.78
CSDE1-211ENST00000525970 ZPR1O75312 459 aa10.15□□□□□ -0.78
CSDE1-211ENST00000525970 NKX2-3Q8TAU0 364 aa10.15□□□□□ -0.78
CSDE1-211ENST00000525970 RCCD1A6NED2 376 aa10.14□□□□□ -0.79
CSDE1-211ENST00000525970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.13□□□□□ -0.79
CSDE1-211ENST00000525970 KMT5BQ4FZB7 885 aa10.13□□□□□ -0.79
CSDE1-211ENST00000525970 GFRA3O60609 400 aa10.12□□□□□ -0.79
CSDE1-211ENST00000525970 SMYD5Q6GMV2 418 aa10.12□□□□□ -0.79
CSDE1-211ENST00000525970 ACTN4O43707 911 aaKnown RBP10.11□□□□□ -0.79
CSDE1-211ENST00000525970 OATP04181 439 aa10.11□□□□□ -0.79
CSDE1-211ENST00000525970 HIC1Q14526 733 aa10.11□□□□□ -0.79
CSDE1-211ENST00000525970 TESPA1A2RU30 521 aaPredicted RBP10.1□□□□□ -0.79
CSDE1-211ENST00000525970 NRG2O14511 850 aaPredicted RBP10.1□□□□□ -0.79
CSDE1-211ENST00000525970 BLOC1S3Q6QNY0 202 aa10.1□□□□□ -0.79
CSDE1-211ENST00000525970 CFHP08603 1231 aa10.08□□□□□ -0.8
CSDE1-211ENST00000525970 FAM161AQ3B820 660 aa10.08□□□□□ -0.8
CSDE1-211ENST00000525970 PXYLP1Q8TE99 480 aa10.08□□□□□ -0.8
CSDE1-211ENST00000525970 PRKCSHP14314 528 aaPredicted RBP10.06□□□□□ -0.8
CSDE1-211ENST00000525970 SLC10A3P09131 477 aa10.05□□□□□ -0.8
CSDE1-211ENST00000525970 RSPH4AQ5TD94 716 aa10.05□□□□□ -0.8
CSDE1-211ENST00000525970 TRAF7Q6Q0C0 670 aa10.05□□□□□ -0.8
CSDE1-211ENST00000525970 GNPATO15228 680 aa10.04□□□□□ -0.8
CSDE1-211ENST00000525970 METTL3Q86U44 580 aaKnown RBP10.04□□□□□ -0.8
CSDE1-211ENST00000525970 RNF223E7ERA6 249 aa10.03□□□□□ -0.8
CSDE1-211ENST00000525970 NR1I2O75469 434 aa10.03□□□□□ -0.8
CSDE1-211ENST00000525970 RBM26Q5T8P6 1007 aaKnown RBP10.03□□□□□ -0.8
CSDE1-211ENST00000525970 PDZRN3Q9UPQ7 1066 aa10.02□□□□□ -0.81
CSDE1-211ENST00000525970 TLL1O43897 1013 aa10.01□□□□□ -0.81
CSDE1-211ENST00000525970 ADH1BP00325 375 aa10.01□□□□□ -0.81
CSDE1-211ENST00000525970 ANKLE1Q8NAG6 615 aa10.01□□□□□ -0.81
CSDE1-211ENST00000525970 LCE2BO14633 110 aa10□□□□□ -0.81
CSDE1-211ENST00000525970 GPR37O15354 613 aa10□□□□□ -0.81
CSDE1-211ENST00000525970 SLC19A1P41440 591 aa10□□□□□ -0.81
CSDE1-211ENST00000525970 DAXXQ9UER7 740 aaPredicted RBP9.98□□□□□ -0.81
CSDE1-211ENST00000525970 S1PR4O95977 384 aa9.97□□□□□ -0.81
CSDE1-211ENST00000525970 FECHP22830 423 aa9.96□□□□□ -0.82
CSDE1-211ENST00000525970 SPRYD7Q5W111 196 aa9.95□□□□□ -0.82
CSDE1-211ENST00000525970 SCUBE3Q8IX30 993 aa9.95□□□□□ -0.82
CSDE1-211ENST00000525970 EMID1Q96A84 441 aaPredicted RBP9.95□□□□□ -0.82
CSDE1-211ENST00000525970 SLC6A16Q9GZN6 736 aa9.95□□□□□ -0.82
CSDE1-211ENST00000525970 ZNF598Q86UK7 904 aaKnown RBP9.94□□□□□ -0.82
CSDE1-211ENST00000525970 SULF1Q8IWU6 871 aa9.93□□□□□ -0.82
CSDE1-211ENST00000525970 PRR20EP86478 221 aa9.92□□□□□ -0.82
CSDE1-211ENST00000525970 PRR20CP86479 221 aa9.92□□□□□ -0.82
CSDE1-211ENST00000525970 PRR20DP86480 221 aa9.92□□□□□ -0.82
CSDE1-211ENST00000525970 PRR20BP86481 221 aa9.92□□□□□ -0.82
CSDE1-211ENST00000525970 PRR20AP86496 221 aa9.92□□□□□ -0.82
CSDE1-211ENST00000525970 TRIM67Q6ZTA4 783 aa9.92□□□□□ -0.82
CSDE1-211ENST00000525970 RDH13Q8NBN7 331 aa9.92□□□□□ -0.82
CSDE1-211ENST00000525970 PPEF1O14829 653 aaPredicted RBP9.91□□□□□ -0.82
CSDE1-211ENST00000525970 PUS10Q3MIT2 529 aaKnown RBP9.91□□□□□ -0.82
CSDE1-211ENST00000525970 LIAT1Q6ZQX7 453 aa9.91□□□□□ -0.82
CSDE1-211ENST00000525970 GPIHBP1Q8IV16 184 aa9.91□□□□□ -0.82
CSDE1-211ENST00000525970 SPSB2Q99619 263 aa9.91□□□□□ -0.82
CSDE1-211ENST00000525970 MORN1Q5T089 497 aa9.9□□□□□ -0.82
CSDE1-211ENST00000525970 DDX11L8A8MPP1 907 aa9.89□□□□□ -0.83
CSDE1-211ENST00000525970 ATP6V1AP38606 617 aa9.89□□□□□ -0.83
CSDE1-211ENST00000525970 ZNF697Q5TEC3 545 aa9.89□□□□□ -0.83
CSDE1-211ENST00000525970 GCGRP47871 477 aa9.88□□□□□ -0.83
CSDE1-211ENST00000525970 TPRNQ4KMQ1 711 aa9.88□□□□□ -0.83
CSDE1-211ENST00000525970 DGAT1O75907 488 aa9.87□□□□□ -0.83
CSDE1-211ENST00000525970 FUT2Q10981 343 aa9.87□□□□□ -0.83
CSDE1-211ENST00000525970 SALL2Q9Y467 1007 aaPredicted RBP9.87□□□□□ -0.83
CSDE1-211ENST00000525970 THAP11Q96EK4 314 aa9.86□□□□□ -0.83
CSDE1-211ENST00000525970 PHOX2BQ99453 314 aa9.86□□□□□ -0.83
CSDE1-211ENST00000525970 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
CSDE1-211ENST00000525970 FMNL1O95466 1100 aaPredicted RBP9.85□□□□□ -0.83
CSDE1-211ENST00000525970 PKDCCQ504Y2 493 aa9.85□□□□□ -0.83
CSDE1-211ENST00000525970 PLA2G2CQ5R387 149 aa9.85□□□□□ -0.83
CSDE1-211ENST00000525970 GDF9O60383 454 aa9.84□□□□□ -0.83
CSDE1-211ENST00000525970 GRIPAP1Q4V328 841 aa9.84□□□□□ -0.83
CSDE1-211ENST00000525970 LMOD2Q6P5Q4 547 aa9.84□□□□□ -0.83
CSDE1-211ENST00000525970 NLRP7Q8WX94 980 aa9.84□□□□□ -0.83
CSDE1-211ENST00000525970 RPIAP49247 311 aa9.83□□□□□ -0.84
CSDE1-211ENST00000525970 ZNF787Q6DD87 383 aa9.83□□□□□ -0.84
CSDE1-211ENST00000525970 SLC27A5Q9Y2P5 690 aa9.83□□□□□ -0.84
CSDE1-211ENST00000525970 MAP2K5Q13163 448 aa9.82□□□□□ -0.84
CSDE1-211ENST00000525970 MYT1Q01538 1121 aa9.8□□□□□ -0.84
CSDE1-211ENST00000525970 BRICD5Q6PL45 260 aa9.8□□□□□ -0.84
CSDE1-211ENST00000525970 FAM160A2Q8N612 972 aaPredicted RBP9.8□□□□□ -0.84
CSDE1-211ENST00000525970 TNFRSF10AO00220 468 aa9.79□□□□□ -0.84
CSDE1-211ENST00000525970 MSS51Q4VC12 460 aa9.79□□□□□ -0.84
CSDE1-211ENST00000525970 FCF1Q9Y324 198 aaKnown RBP9.79□□□□□ -0.84
CSDE1-211ENST00000525970 CD46P15529 392 aa9.78□□□□□ -0.84
CSDE1-211ENST00000525970 Q3C1V9 767 aa9.78□□□□□ -0.84
CSDE1-211ENST00000525970 FAM187AA6NFU0 413 aa9.77□□□□□ -0.85
CSDE1-211ENST00000525970 IRF6O14896 467 aa9.77□□□□□ -0.85
CSDE1-211ENST00000525970 CD2BP2O95400 341 aaKnown RBP9.77□□□□□ -0.85
CSDE1-211ENST00000525970 MINK1Q8N4C8 1332 aaPredicted RBP9.77□□□□□ -0.85
CSDE1-211ENST00000525970 PKD2L1Q9P0L9 805 aa9.76□□□□□ -0.85
CSDE1-211ENST00000525970 USP46P62068 366 aa9.74□□□□□ -0.85
CSDE1-211ENST00000525970 RNF19BQ6ZMZ0 732 aa9.74□□□□□ -0.85
CSDE1-211ENST00000525970 KDM4AO75164 1064 aa9.73□□□□□ -0.85
CSDE1-211ENST00000525970 FOXC1Q12948 553 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms