RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 FANCAO15360 1455 aa9.66□□□□□ -0.86
CCDC90B-204ENST00000525504 TROQ12816 1431 aaPredicted RBP9.65□□□□□ -0.86
CCDC90B-204ENST00000525504 CASKIN1Q8WXD9 1431 aa9.65□□□□□ -0.86
CCDC90B-204ENST00000525504 FBXO22Q8NEZ5 403 aa9.65□□□□□ -0.86
CCDC90B-204ENST00000525504 CDK13Q14004 1512 aaKnown RBP9.65□□□□□ -0.86
CCDC90B-204ENST00000525504 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.64□□□□□ -0.87
CCDC90B-204ENST00000525504 ZFP91Q96JP5 570 aaPredicted RBP9.64□□□□□ -0.87
CCDC90B-204ENST00000525504 SCAPERQ9BY12 1400 aa9.64□□□□□ -0.87
CCDC90B-204ENST00000525504 RIOK3O14730 519 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-204ENST00000525504 VGFO15240 615 aaPredicted RBP9.63□□□□□ -0.87
CCDC90B-204ENST00000525504 MAGI2Q86UL8 1455 aa9.62□□□□□ -0.87
CCDC90B-204ENST00000525504 PPP4R3BQ5MIZ7 849 aa9.62□□□□□ -0.87
CCDC90B-204ENST00000525504 CLIP1P30622 1438 aa9.62□□□□□ -0.87
CCDC90B-204ENST00000525504 AFAP1Q8N556 730 aa9.61□□□□□ -0.87
CCDC90B-204ENST00000525504 ARID4BQ4LE39 1312 aaPredicted RBP9.6□□□□□ -0.87
CCDC90B-204ENST00000525504 THSD4Q6ZMP0 1018 aa9.6□□□□□ -0.87
CCDC90B-204ENST00000525504 POGZQ7Z3K3 1410 aa9.59□□□□□ -0.87
CCDC90B-204ENST00000525504 YEATS2Q9ULM3 1422 aa9.59□□□□□ -0.87
CCDC90B-204ENST00000525504 RNF25Q96BH1 459 aaPredicted RBP9.59□□□□□ -0.87
CCDC90B-204ENST00000525504 FRMPD1Q5SYB0 1578 aa9.58□□□□□ -0.88
CCDC90B-204ENST00000525504 PTCD2Q8WV60 388 aaKnown RBP9.58□□□□□ -0.88
CCDC90B-204ENST00000525504 VPS9D1Q9Y2B5 631 aa9.58□□□□□ -0.88
CCDC90B-204ENST00000525504 PTPRMP28827 1452 aa9.58□□□□□ -0.88
CCDC90B-204ENST00000525504 HECW1Q76N89 1606 aa9.57□□□□□ -0.88
CCDC90B-204ENST00000525504 TMC2Q8TDI7 906 aa9.57□□□□□ -0.88
CCDC90B-204ENST00000525504 SLC4A5Q9BY07 1137 aa9.57□□□□□ -0.88
CCDC90B-204ENST00000525504 CCDC18Q5T9S5 1454 aa9.57□□□□□ -0.88
CCDC90B-204ENST00000525504 TTC37Q6PGP7 1564 aa9.57□□□□□ -0.88
CCDC90B-204ENST00000525504 ZMYM4Q5VZL5 1548 aa9.56□□□□□ -0.88
CCDC90B-204ENST00000525504 ATP10AO60312 1499 aa9.56□□□□□ -0.88
CCDC90B-204ENST00000525504 LAPTM4AQ15012 233 aa9.56□□□□□ -0.88
CCDC90B-204ENST00000525504 FYCO1Q9BQS8 1478 aa9.55□□□□□ -0.88
CCDC90B-204ENST00000525504 ZNF518AQ6AHZ1 1483 aa9.53□□□□□ -0.88
CCDC90B-204ENST00000525504 MLH3Q9UHC1 1453 aa9.53□□□□□ -0.88
CCDC90B-204ENST00000525504 GPATCH8Q9UKJ3 1502 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-204ENST00000525504 ADAMTSL3P82987 1691 aa9.53□□□□□ -0.88
CCDC90B-204ENST00000525504 LOC105371045A0A1W2PR82 267 aa9.53□□□□□ -0.88
CCDC90B-204ENST00000525504 CFDP1Q9UEE9 299 aaPredicted RBP9.53□□□□□ -0.88
CCDC90B-204ENST00000525504 KIAA1107Q9UPP5 1409 aa9.53□□□□□ -0.88
CCDC90B-204ENST00000525504 TRAPPC8Q9Y2L5 1435 aa9.53□□□□□ -0.88
CCDC90B-204ENST00000525504 ZFYVE16Q7Z3T8 1539 aa9.52□□□□□ -0.88
CCDC90B-204ENST00000525504 ARHGEF40Q8TER5 1519 aa9.52□□□□□ -0.88
CCDC90B-204ENST00000525504 ARHGEF12Q9NZN5 1544 aa9.52□□□□□ -0.88
CCDC90B-204ENST00000525504 MLECQ14165 292 aa9.52□□□□□ -0.89
CCDC90B-204ENST00000525504 C9orf84Q5VXU9 1444 aa9.52□□□□□ -0.89
CCDC90B-204ENST00000525504 KCNK17Q96T54 332 aa9.52□□□□□ -0.89
CCDC90B-204ENST00000525504 CFAP74Q9C0B2 1584 aa9.52□□□□□ -0.89
CCDC90B-204ENST00000525504 BHMG1C9JSJ3 638 aaPredicted RBP9.51□□□□□ -0.89
CCDC90B-204ENST00000525504 ITGBL1O95965 494 aaPredicted RBP9.51□□□□□ -0.89
CCDC90B-204ENST00000525504 HNRNPMP52272 730 aaKnown RBP eCLIP9.51□□□□□ -0.89
CCDC90B-204ENST00000525504 KIF14Q15058 1648 aa9.51□□□□□ -0.89
CCDC90B-204ENST00000525504 ARHGAP5Q13017 1502 aa9.51□□□□□ -0.89
CCDC90B-204ENST00000525504 CEP162Q5TB80 1403 aa9.5□□□□□ -0.89
CCDC90B-204ENST00000525504 MFRPQ9BY79 579 aa9.5□□□□□ -0.89
CCDC90B-204ENST00000525504 ZNF777Q9ULD5 760 aaPredicted RBP9.5□□□□□ -0.89
CCDC90B-204ENST00000525504 RICTORQ6R327 1708 aa9.5□□□□□ -0.89
CCDC90B-204ENST00000525504 HECW2Q9P2P5 1572 aa9.5□□□□□ -0.89
CCDC90B-204ENST00000525504 MTUS2Q5JR59 1369 aa9.5□□□□□ -0.89
CCDC90B-204ENST00000525504 CCNB3Q8WWL7 1395 aa9.5□□□□□ -0.89
CCDC90B-204ENST00000525504 SPAG9O60271 1321 aaKnown RBP9.49□□□□□ -0.89
CCDC90B-204ENST00000525504 PCF11O94913 1555 aaKnown RBP9.49□□□□□ -0.89
CCDC90B-204ENST00000525504 KDM5CP41229 1560 aa9.49□□□□□ -0.89
CCDC90B-204ENST00000525504 WNT2BQ93097 391 aa9.48□□□□□ -0.89
CCDC90B-204ENST00000525504 ZNF644Q9H582 1327 aaPredicted RBP9.48□□□□□ -0.89
CCDC90B-204ENST00000525504 GOLGA8CPA6NN73 597 aa9.47□□□□□ -0.89
CCDC90B-204ENST00000525504 CEBPAP49715 358 aaPredicted RBP9.47□□□□□ -0.89
CCDC90B-204ENST00000525504 RSPH4AQ5TD94 716 aa9.47□□□□□ -0.89
CCDC90B-204ENST00000525504 TRAF7Q6Q0C0 670 aa9.47□□□□□ -0.89
CCDC90B-204ENST00000525504 BCORL1Q5H9F3 1711 aa9.47□□□□□ -0.89
CCDC90B-204ENST00000525504 PLEKHH2Q8IVE3 1493 aa9.47□□□□□ -0.89
CCDC90B-204ENST00000525504 LMTK3Q96Q04 1460 aa9.47□□□□□ -0.89
CCDC90B-204ENST00000525504 AGLP35573 1532 aa9.46□□□□□ -0.89
CCDC90B-204ENST00000525504 TAOK2Q9UL54 1235 aa9.46□□□□□ -0.9
CCDC90B-204ENST00000525504 ABCC1P33527 1531 aa9.46□□□□□ -0.9
CCDC90B-204ENST00000525504 LCE2BO14633 110 aa9.45□□□□□ -0.9
CCDC90B-204ENST00000525504 TBC1D12O60347 775 aa9.45□□□□□ -0.9
CCDC90B-204ENST00000525504 HSPA2P54652 639 aa9.45□□□□□ -0.9
CCDC90B-204ENST00000525504 BCL11BQ9C0K0 894 aaPredicted RBP9.45□□□□□ -0.9
CCDC90B-204ENST00000525504 MBD5Q9P267 1494 aa9.45□□□□□ -0.9
CCDC90B-204ENST00000525504 MADDQ8WXG6 1647 aa9.45□□□□□ -0.9
CCDC90B-204ENST00000525504 MRPL50Q8N5N7 158 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-204ENST00000525504 REREQ9P2R6 1566 aa9.44□□□□□ -0.9
CCDC90B-204ENST00000525504 BCL2L12Q9HB09 334 aa9.43□□□□□ -0.9
CCDC90B-204ENST00000525504 RTEL1-TNFRSF6BF6WH68 1400 aa9.42□□□□□ -0.9
CCDC90B-204ENST00000525504 VPS8Q8N3P4 1428 aa9.42□□□□□ -0.9
CCDC90B-204ENST00000525504 KANK4Q5T7N3 995 aaPredicted RBP9.42□□□□□ -0.9
CCDC90B-204ENST00000525504 ESF1Q9H501 851 aaKnown RBP9.42□□□□□ -0.9
CCDC90B-204ENST00000525504 LRRIQ1Q96JM4 1722 aa9.42□□□□□ -0.9
CCDC90B-204ENST00000525504 MYO5CQ9NQX4 1742 aa9.42□□□□□ -0.9
CCDC90B-204ENST00000525504 DIP2CQ9Y2E4 1556 aa9.41□□□□□ -0.9
CCDC90B-204ENST00000525504 CNTLNQ9NXG0 1405 aa9.41□□□□□ -0.9
CCDC90B-204ENST00000525504 ZMYM3Q14202 1370 aa9.41□□□□□ -0.9
CCDC90B-204ENST00000525504 STK24Q9Y6E0 443 aa9.41□□□□□ -0.9
CCDC90B-204ENST00000525504 SIGLEC1Q9BZZ2 1709 aa9.41□□□□□ -0.9
CCDC90B-204ENST00000525504 PREX2Q70Z35 1606 aa9.41□□□□□ -0.9
CCDC90B-204ENST00000525504 SAMD9LQ8IVG5 1584 aa9.41□□□□□ -0.9
CCDC90B-204ENST00000525504 DHX29Q7Z478 1369 aaKnown RBP9.4□□□□□ -0.9
CCDC90B-204ENST00000525504 FOXK1P85037 733 aa9.4□□□□□ -0.9
CCDC90B-204ENST00000525504 FBXO41Q8TF61 875 aa9.4□□□□□ -0.9
CCDC90B-204ENST00000525504 NCOA2Q15596 1464 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms