RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SPDYE4A6NLX3 237 aa9.55□□□□□ -0.88
CD44-214ENST00000525211 PIK3C2BO00750 1634 aa9.55□□□□□ -0.88
CD44-214ENST00000525211 MYO3AQ8NEV4 1616 aa9.55□□□□□ -0.88
CD44-214ENST00000525211 TRPM2O94759 1503 aa9.55□□□□□ -0.88
CD44-214ENST00000525211 LMTK3Q96Q04 1460 aa9.54□□□□□ -0.88
CD44-214ENST00000525211 A2ML1A8K2U0 1454 aa9.53□□□□□ -0.88
CD44-214ENST00000525211 CHGAP10645 457 aaKnown RBP9.53□□□□□ -0.88
CD44-214ENST00000525211 NEUROD1Q13562 356 aa9.53□□□□□ -0.88
CD44-214ENST00000525211 NUTM2DQ5VT03 806 aaPredicted RBP9.53□□□□□ -0.88
CD44-214ENST00000525211 MYO5BQ9ULV0 1848 aa9.52□□□□□ -0.89
CD44-214ENST00000525211 LTKP29376 864 aa9.52□□□□□ -0.89
CD44-214ENST00000525211 SPATA31E1Q6ZUB1 1445 aa9.52□□□□□ -0.89
CD44-214ENST00000525211 TMEM131LA2VDJ0 1609 aa9.52□□□□□ -0.89
CD44-214ENST00000525211 CEP170BQ9Y4F5 1589 aaPredicted RBP9.51□□□□□ -0.89
CD44-214ENST00000525211 UHRF1BP1Q6BDS2 1440 aa9.51□□□□□ -0.89
CD44-214ENST00000525211 RGL3Q3MIN7 710 aa9.51□□□□□ -0.89
CD44-214ENST00000525211 RTN4Q9NQC3 1192 aaKnown RBP9.51□□□□□ -0.89
CD44-214ENST00000525211 NLRP1Q9C000 1473 aa9.51□□□□□ -0.89
CD44-214ENST00000525211 NCKAP5LQ9HCH0 1330 aa9.51□□□□□ -0.89
CD44-214ENST00000525211 UBR1Q8IWV7 1749 aa9.51□□□□□ -0.89
CD44-214ENST00000525211 SETD1BQ9UPS6 1966 aaKnown RBP9.5□□□□□ -0.89
CD44-214ENST00000525211 CCER1Q8TC90 406 aaPredicted RBP9.5□□□□□ -0.89
CD44-214ENST00000525211 SLC52A1Q9NWF4 448 aa9.5□□□□□ -0.89
CD44-214ENST00000525211 ADGRB3O60242 1522 aa9.5□□□□□ -0.89
CD44-214ENST00000525211 CCDC144AA2RUR9 1427 aa9.49□□□□□ -0.89
CD44-214ENST00000525211 ZNF142P52746 1687 aaPredicted RBP9.49□□□□□ -0.89
CD44-214ENST00000525211 AMER1Q5JTC6 1135 aaPredicted RBP9.49□□□□□ -0.89
CD44-214ENST00000525211 ACIN1Q9UKV3 1341 aaKnown RBP9.49□□□□□ -0.89
CD44-214ENST00000525211 ZFYVE9O95405 1425 aa9.48□□□□□ -0.89
CD44-214ENST00000525211 ADGRF5Q8IZF2 1346 aa9.48□□□□□ -0.89
CD44-214ENST00000525211 ARHGAP23Q9P227 1491 aa9.47□□□□□ -0.89
CD44-214ENST00000525211 DSG3P32926 999 aa9.47□□□□□ -0.89
CD44-214ENST00000525211 L3MBTL2Q969R5 705 aa9.47□□□□□ -0.89
CD44-214ENST00000525211 TMEM2Q9UHN6 1383 aa9.47□□□□□ -0.89
CD44-214ENST00000525211 RIMS2Q9UQ26 1411 aa9.47□□□□□ -0.89
CD44-214ENST00000525211 NEXMIFQ5QGS0 1516 aa9.46□□□□□ -0.89
CD44-214ENST00000525211 ZNF326Q5BKZ1 582 aaKnown RBP9.46□□□□□ -0.9
CD44-214ENST00000525211 STAG3Q9UJ98 1225 aa9.46□□□□□ -0.9
CD44-214ENST00000525211 KDM2AQ9Y2K7 1162 aa9.46□□□□□ -0.9
CD44-214ENST00000525211 SLIT1O75093 1534 aa9.46□□□□□ -0.9
CD44-214ENST00000525211 NEURL4Q96JN8 1562 aa9.46□□□□□ -0.9
CD44-214ENST00000525211 STRCQ7RTU9 1775 aa9.45□□□□□ -0.9
CD44-214ENST00000525211 TXNDC2Q86VQ3 553 aa9.45□□□□□ -0.9
CD44-214ENST00000525211 THEMISQ8N1K5 641 aaPredicted RBP9.45□□□□□ -0.9
CD44-214ENST00000525211 ZBTB12Q9Y330 459 aaPredicted RBP9.45□□□□□ -0.9
CD44-214ENST00000525211 KIF1BO60333 1816 aa9.45□□□□□ -0.9
CD44-214ENST00000525211 NBPF8Q3BBV2 869 aa9.44□□□□□ -0.9
CD44-214ENST00000525211 ILDR2Q71H61 639 aa9.43□□□□□ -0.9
CD44-214ENST00000525211 PROM2Q8N271 834 aa9.43□□□□□ -0.9
CD44-214ENST00000525211 DCAF11Q8TEB1 546 aa9.43□□□□□ -0.9
CD44-214ENST00000525211 PPLO60437 1756 aa9.42□□□□□ -0.9
CD44-214ENST00000525211 IFT172Q9UG01 1749 aa9.42□□□□□ -0.9
CD44-214ENST00000525211 SLC26A8Q96RN1 970 aa9.42□□□□□ -0.9
CD44-214ENST00000525211 KDM5AP29375 1690 aaKnown RBP9.42□□□□□ -0.9
CD44-214ENST00000525211 NRXN3Q9Y4C0 1643 aa9.42□□□□□ -0.9
CD44-214ENST00000525211 SCAF11Q99590 1463 aaKnown RBP9.41□□□□□ -0.9
CD44-214ENST00000525211 ADAMTS13Q76LX8 1427 aa9.41□□□□□ -0.9
CD44-214ENST00000525211 ANKLE2Q86XL3 938 aa9.41□□□□□ -0.9
CD44-214ENST00000525211 CFAP70Q5T0N1 1121 aa9.4□□□□□ -0.9
CD44-214ENST00000525211 MED14O60244 1454 aa9.4□□□□□ -0.91
CD44-214ENST00000525211 NRXN1Q9ULB1 1477 aa9.4□□□□□ -0.91
CD44-214ENST00000525211 NPHP4O75161 1426 aaPredicted RBP9.39□□□□□ -0.91
CD44-214ENST00000525211 PTPRUQ92729 1446 aa9.39□□□□□ -0.91
CD44-214ENST00000525211 PLEKHG1Q9ULL1 1385 aa9.39□□□□□ -0.91
CD44-214ENST00000525211 RPGRIP1LQ68CZ1 1315 aa9.39□□□□□ -0.91
CD44-214ENST00000525211 CLSPNQ9HAW4 1339 aa9.39□□□□□ -0.91
CD44-214ENST00000525211 SOCS7O14512 581 aa9.39□□□□□ -0.91
CD44-214ENST00000525211 NBPF1Q3BBV0 1214 aa9.39□□□□□ -0.91
CD44-214ENST00000525211 FBXO41Q8TF61 875 aa9.39□□□□□ -0.91
CD44-214ENST00000525211 ASXL1Q8IXJ9 1541 aa9.39□□□□□ -0.91
CD44-214ENST00000525211 IQGAP1P46940 1657 aa9.39□□□□□ -0.91
CD44-214ENST00000525211 METP08581 1390 aa9.38□□□□□ -0.91
CD44-214ENST00000525211 PPP1R15AO75807 674 aaPredicted RBP9.38□□□□□ -0.91
CD44-214ENST00000525211 TMEM132EQ6IEE7 984 aa9.38□□□□□ -0.91
CD44-214ENST00000525211 FBXO3Q9UK99 471 aa9.38□□□□□ -0.91
CD44-214ENST00000525211 MYOM2P54296 1465 aa9.38□□□□□ -0.91
CD44-214ENST00000525211 PIK3C2GO75747 1445 aa9.38□□□□□ -0.91
CD44-214ENST00000525211 PRAG1Q86YV5 1406 aa9.38□□□□□ -0.91
CD44-214ENST00000525211 TONSLQ96HA7 1378 aa9.37□□□□□ -0.91
CD44-214ENST00000525211 SETD1AO15047 1707 aaKnown RBP9.37□□□□□ -0.91
CD44-214ENST00000525211 POLR1AO95602 1720 aaPredicted RBP9.37□□□□□ -0.91
CD44-214ENST00000525211 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.37□□□□□ -0.91
CD44-214ENST00000525211 EID1Q9Y6B2 187 aa9.37□□□□□ -0.91
CD44-214ENST00000525211 ALKQ9UM73 1620 aa9.37□□□□□ -0.91
CD44-214ENST00000525211 ZNF335Q9H4Z2 1342 aaPredicted RBP9.36□□□□□ -0.91
CD44-214ENST00000525211 VGFO15240 615 aaPredicted RBP9.36□□□□□ -0.91
CD44-214ENST00000525211 CACNB1Q02641 598 aaPredicted RBP9.36□□□□□ -0.91
CD44-214ENST00000525211 RBM33Q96EV2 1170 aaKnown RBP9.36□□□□□ -0.91
CD44-214ENST00000525211 C14orf93Q9H972 538 aaKnown RBP9.36□□□□□ -0.91
CD44-214ENST00000525211 SETBP1Q9Y6X0 1596 aa9.36□□□□□ -0.91
CD44-214ENST00000525211 STRCP1A6NGW2 1772 aa9.35□□□□□ -0.91
CD44-214ENST00000525211 BCANQ96GW7 911 aa9.35□□□□□ -0.91
CD44-214ENST00000525211 TBX22Q9Y458 520 aa9.34□□□□□ -0.91
CD44-214ENST00000525211 ADGRB1O14514 1584 aa9.33□□□□□ -0.92
CD44-214ENST00000525211 STK26Q9P289 416 aa9.33□□□□□ -0.92
CD44-214ENST00000525211 TRPM1Q7Z4N2 1603 aa9.32□□□□□ -0.92
CD44-214ENST00000525211 KCNA6P17658 529 aa9.32□□□□□ -0.92
CD44-214ENST00000525211 PLEKHH1Q9ULM0 1364 aa9.32□□□□□ -0.92
CD44-214ENST00000525211 HDGFP51858 240 aaKnown RBP9.31□□□□□ -0.92
CD44-214ENST00000525211 WAPLQ7Z5K2 1190 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms