RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 SEC24BO95487 1268 aa13.49□□□□□ -0.25
DEPDC1-205ENST00000525124 PLA2R1Q13018 1463 aa13.48□□□□□ -0.25
DEPDC1-205ENST00000525124 CEP170BQ9Y4F5 1589 aaPredicted RBP13.47□□□□□ -0.25
DEPDC1-205ENST00000525124 IER5LQ5T953 404 aa13.47□□□□□ -0.25
DEPDC1-205ENST00000525124 PTPRKQ15262 1439 aa13.46□□□□□ -0.26
DEPDC1-205ENST00000525124 ARHGEF5Q12774 1597 aa13.45□□□□□ -0.26
DEPDC1-205ENST00000525124 POLR1AO95602 1720 aaPredicted RBP13.45□□□□□ -0.26
DEPDC1-205ENST00000525124 FAM163AQ96GL9 167 aaPredicted RBP13.45□□□□□ -0.26
DEPDC1-205ENST00000525124 TMEM106CQ9BVX2 250 aa13.44□□□□□ -0.26
DEPDC1-205ENST00000525124 TCOF1Q13428 1488 aaKnown RBP13.43□□□□□ -0.26
DEPDC1-205ENST00000525124 CCDC141Q6ZP82 1450 aa13.43□□□□□ -0.26
DEPDC1-205ENST00000525124 DCAF8Q5TAQ9 597 aa13.43□□□□□ -0.26
DEPDC1-205ENST00000525124 RSPH4AQ5TD94 716 aa13.43□□□□□ -0.26
DEPDC1-205ENST00000525124 DHX29Q7Z478 1369 aaKnown RBP13.43□□□□□ -0.26
DEPDC1-205ENST00000525124 DNMT1P26358 1616 aaKnown RBP13.42□□□□□ -0.26
DEPDC1-205ENST00000525124 CAMSAP2Q08AD1 1489 aa13.42□□□□□ -0.26
DEPDC1-205ENST00000525124 NCOA2Q15596 1464 aa13.42□□□□□ -0.26
DEPDC1-205ENST00000525124 FBXO3Q9UK99 471 aa13.42□□□□□ -0.26
DEPDC1-205ENST00000525124 MAST1Q9Y2H9 1570 aa13.41□□□□□ -0.26
DEPDC1-205ENST00000525124 KDM5DQ9BY66 1539 aa13.41□□□□□ -0.26
DEPDC1-205ENST00000525124 ZC3H13Q5T200 1668 aaKnown RBP13.4□□□□□ -0.26
DEPDC1-205ENST00000525124 ZNF644Q9H582 1327 aaPredicted RBP13.4□□□□□ -0.26
DEPDC1-205ENST00000525124 MAP3K1Q13233 1512 aa13.4□□□□□ -0.26
DEPDC1-205ENST00000525124 PYGBP11216 843 aa13.4□□□□□ -0.26
DEPDC1-205ENST00000525124 A2ML1A8K2U0 1454 aa13.4□□□□□ -0.26
DEPDC1-205ENST00000525124 RNF17Q9BXT8 1623 aaKnown RBP13.39□□□□□ -0.27
DEPDC1-205ENST00000525124 EIF2AK4Q9P2K8 1649 aaKnown RBP13.39□□□□□ -0.27
DEPDC1-205ENST00000525124 PKD2Q13563 968 aa13.39□□□□□ -0.27
DEPDC1-205ENST00000525124 GGT6Q6P531 493 aa13.39□□□□□ -0.27
DEPDC1-205ENST00000525124 PZPP20742 1482 aa13.38□□□□□ -0.27
DEPDC1-205ENST00000525124 VPS8Q8N3P4 1428 aa13.37□□□□□ -0.27
DEPDC1-205ENST00000525124 LRRC9Q6ZRR7 1453 aa13.36□□□□□ -0.27
DEPDC1-205ENST00000525124 PCDH10Q9P2E7 1040 aa13.36□□□□□ -0.27
DEPDC1-205ENST00000525124 NEURL4Q96JN8 1562 aa13.35□□□□□ -0.27
DEPDC1-205ENST00000525124 DEPDC5O75140 1603 aa13.35□□□□□ -0.27
DEPDC1-205ENST00000525124 IRX5P78411 483 aaPredicted RBP13.34□□□□□ -0.27
DEPDC1-205ENST00000525124 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
DEPDC1-205ENST00000525124 NLRP1Q9C000 1473 aa13.33□□□□□ -0.28
DEPDC1-205ENST00000525124 CROCC2H7BZ55 1655 aa13.33□□□□□ -0.28
DEPDC1-205ENST00000525124 MIA2Q96PC5 1412 aa13.32□□□□□ -0.28
DEPDC1-205ENST00000525124 KIF3BO15066 747 aa13.32□□□□□ -0.28
DEPDC1-205ENST00000525124 PCDHB8Q9UN66 801 aa13.32□□□□□ -0.28
DEPDC1-205ENST00000525124 SPATA31D1Q6ZQQ2 1576 aa13.32□□□□□ -0.28
DEPDC1-205ENST00000525124 TNRQ92752 1358 aa13.32□□□□□ -0.28
DEPDC1-205ENST00000525124 CEP152O94986 1710 aa13.31□□□□□ -0.28
DEPDC1-205ENST00000525124 MROH1Q8NDA8 1641 aa13.31□□□□□ -0.28
DEPDC1-205ENST00000525124 CPS1P31327 1500 aa13.3□□□□□ -0.28
DEPDC1-205ENST00000525124 TSPY4P0CV99 314 aa13.3□□□□□ -0.28
DEPDC1-205ENST00000525124 TSPY10P0CW01 314 aa13.3□□□□□ -0.28
DEPDC1-205ENST00000525124 PLCG2P16885 1265 aa13.3□□□□□ -0.28
DEPDC1-205ENST00000525124 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
DEPDC1-205ENST00000525124 ZNF335Q9H4Z2 1342 aaPredicted RBP13.3□□□□□ -0.28
DEPDC1-205ENST00000525124 MED14O60244 1454 aa13.29□□□□□ -0.28
DEPDC1-205ENST00000525124 CFAP65Q6ZU64 1925 aaKnown RBP13.29□□□□□ -0.28
DEPDC1-205ENST00000525124 UGGT1Q9NYU2 1555 aa13.29□□□□□ -0.28
DEPDC1-205ENST00000525124 MYOM3Q5VTT5 1437 aa13.29□□□□□ -0.28
DEPDC1-205ENST00000525124 ABCC3O15438 1527 aa13.29□□□□□ -0.28
DEPDC1-205ENST00000525124 IQGAP1P46940 1657 aa13.28□□□□□ -0.28
DEPDC1-205ENST00000525124 WASHC2CQ9Y4E1 1318 aa13.28□□□□□ -0.28
DEPDC1-205ENST00000525124 DUOX2Q9NRD8 1548 aa13.28□□□□□ -0.28
DEPDC1-205ENST00000525124 UBR1Q8IWV7 1749 aa13.27□□□□□ -0.28
DEPDC1-205ENST00000525124 SLAIN1Q8ND83 568 aa13.27□□□□□ -0.29
DEPDC1-205ENST00000525124 FBXO31Q5XUX0 539 aaPredicted RBP13.26□□□□□ -0.29
DEPDC1-205ENST00000525124 KLHL34Q8N239 644 aa13.26□□□□□ -0.29
DEPDC1-205ENST00000525124 VWDEQ8N2E2 1590 aa13.26□□□□□ -0.29
DEPDC1-205ENST00000525124 DISP3Q9P2K9 1392 aa13.26□□□□□ -0.29
DEPDC1-205ENST00000525124 SHANK2Q9UPX8 1470 aa13.26□□□□□ -0.29
DEPDC1-205ENST00000525124 PRDM15P57071 1507 aaPredicted RBP13.25□□□□□ -0.29
DEPDC1-205ENST00000525124 THEMISQ8N1K5 641 aaPredicted RBP13.25□□□□□ -0.29
DEPDC1-205ENST00000525124 OCEL1Q9H607 264 aa13.25□□□□□ -0.29
DEPDC1-205ENST00000525124 KDM5AP29375 1690 aaKnown RBP13.24□□□□□ -0.29
DEPDC1-205ENST00000525124 PTPN23Q9H3S7 1636 aa13.24□□□□□ -0.29
DEPDC1-205ENST00000525124 STRCP1A6NGW2 1772 aa13.24□□□□□ -0.29
DEPDC1-205ENST00000525124 SYNMO15061 1565 aa13.24□□□□□ -0.29
DEPDC1-205ENST00000525124 ERVK-7P63135 1459 aa13.23□□□□□ -0.29
DEPDC1-205ENST00000525124 GSE1Q14687 1217 aa13.22□□□□□ -0.29
DEPDC1-205ENST00000525124 ANKLE2Q86XL3 938 aa13.22□□□□□ -0.29
DEPDC1-205ENST00000525124 ARHGAP31Q2M1Z3 1444 aa13.22□□□□□ -0.29
DEPDC1-205ENST00000525124 ERBINQ96RT1 1412 aa13.22□□□□□ -0.29
DEPDC1-205ENST00000525124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.21□□□□□ -0.29
DEPDC1-205ENST00000525124 UBAP1LF5GYI3 381 aa13.21□□□□□ -0.29
DEPDC1-205ENST00000525124 KANK4Q5T7N3 995 aaPredicted RBP13.21□□□□□ -0.29
DEPDC1-205ENST00000525124 NPHP4O75161 1426 aaPredicted RBP13.21□□□□□ -0.3
DEPDC1-205ENST00000525124 SLIT1O75093 1534 aa13.19□□□□□ -0.3
DEPDC1-205ENST00000525124 LOC105371045A0A1W2PR82 267 aa13.19□□□□□ -0.3
DEPDC1-205ENST00000525124 ILDR2Q71H61 639 aa13.19□□□□□ -0.3
DEPDC1-205ENST00000525124 XIRP1Q702N8 1843 aaKnown RBP13.18□□□□□ -0.3
DEPDC1-205ENST00000525124 ARHGAP23Q9P227 1491 aa13.18□□□□□ -0.3
DEPDC1-205ENST00000525124 ALKQ9UM73 1620 aa13.18□□□□□ -0.3
DEPDC1-205ENST00000525124 SOCS7O14512 581 aa13.18□□□□□ -0.3
DEPDC1-205ENST00000525124 ST18O60284 1047 aa13.18□□□□□ -0.3
DEPDC1-205ENST00000525124 CHRM1P11229 460 aaPredicted RBP13.18□□□□□ -0.3
DEPDC1-205ENST00000525124 ABCC5O15440 1437 aa13.18□□□□□ -0.3
DEPDC1-205ENST00000525124 ZNF467Q7Z7K2 595 aaPredicted RBP13.17□□□□□ -0.3
DEPDC1-205ENST00000525124 LMTK2Q8IWU2 1503 aa13.17□□□□□ -0.3
DEPDC1-205ENST00000525124 PIK3C2BO00750 1634 aa13.17□□□□□ -0.3
DEPDC1-205ENST00000525124 DAPK1P53355 1430 aa13.16□□□□□ -0.3
DEPDC1-205ENST00000525124 TOM1O60784 492 aa13.16□□□□□ -0.3
DEPDC1-205ENST00000525124 KIF15Q9NS87 1388 aa13.16□□□□□ -0.3
DEPDC1-205ENST00000525124 FGD6Q6ZV73 1430 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms