RNA–Protein interactions for RNA: ENST00000524324.5

CA1-223, Transcript of carbonic anhydrase 1, human

TSL 2

Gene CA1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CA1-223	ENST00000524324	ANKRD30B	Q9BXX2	1392 aa		11.55	□□□□□ -0.56
CA1-223	ENST00000524324	SPATA31D1	Q6ZQQ2	1576 aa		11.55	□□□□□ -0.56
CA1-223	ENST00000524324	HSPA2	P54652	639 aa		11.55	□□□□□ -0.56
CA1-223	ENST00000524324	RPRD2	Q5VT52	1461 aa	Known RBP	11.55	□□□□□ -0.56
CA1-223	ENST00000524324	CCER1	Q8TC90	406 aa	Predicted RBP	11.54	□□□□□ -0.56
CA1-223	ENST00000524324	SPHKAP	Q2M3C7	1700 aa		11.54	□□□□□ -0.56
CA1-223	ENST00000524324	RGL3	Q3MIN7	710 aa		11.53	□□□□□ -0.56
CA1-223	ENST00000524324	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.53	□□□□□ -0.56
CA1-223	ENST00000524324	SLC52A1	Q9NWF4	448 aa		11.53	□□□□□ -0.56
CA1-223	ENST00000524324	STAG3	Q9UJ98	1225 aa		11.52	□□□□□ -0.57
CA1-223	ENST00000524324	CLTCL1	P53675	1640 aa		11.52	□□□□□ -0.57
CA1-223	ENST00000524324	SETD1B	Q9UPS6	1966 aa	Known RBP	11.52	□□□□□ -0.57
CA1-223	ENST00000524324	PIK3C2B	O00750	1634 aa		11.51	□□□□□ -0.57
CA1-223	ENST00000524324	MYO3A	Q8NEV4	1616 aa		11.5	□□□□□ -0.57
CA1-223	ENST00000524324	TRPM2	O94759	1503 aa		11.5	□□□□□ -0.57
CA1-223	ENST00000524324	MYO5B	Q9ULV0	1848 aa		11.49	□□□□□ -0.57
CA1-223	ENST00000524324	ZNF326	Q5BKZ1	582 aa	Known RBP	11.49	□□□□□ -0.57
CA1-223	ENST00000524324	CCDC144A	A2RUR9	1427 aa		11.49	□□□□□ -0.57
CA1-223	ENST00000524324	UHRF1BP1	Q6BDS2	1440 aa		11.49	□□□□□ -0.57
CA1-223	ENST00000524324	NCKAP5L	Q9HCH0	1330 aa		11.48	□□□□□ -0.57
CA1-223	ENST00000524324	A2ML1	A8K2U0	1454 aa		11.48	□□□□□ -0.57
CA1-223	ENST00000524324	TMEM131L	A2VDJ0	1609 aa		11.47	□□□□□ -0.57
CA1-223	ENST00000524324	LMTK3	Q96Q04	1460 aa		11.47	□□□□□ -0.57
CA1-223	ENST00000524324	NLRP1	Q9C000	1473 aa		11.47	□□□□□ -0.57
CA1-223	ENST00000524324	LTK	P29376	864 aa		11.47	□□□□□ -0.57
CA1-223	ENST00000524324	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.47	□□□□□ -0.57
CA1-223	ENST00000524324	KDM2A	Q9Y2K7	1162 aa		11.47	□□□□□ -0.57
CA1-223	ENST00000524324	UBR1	Q8IWV7	1749 aa		11.46	□□□□□ -0.57
CA1-223	ENST00000524324	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.46	□□□□□ -0.57
CA1-223	ENST00000524324	KIF1B	O60333	1816 aa		11.46	□□□□□ -0.58
CA1-223	ENST00000524324	TXNDC2	Q86VQ3	553 aa		11.45	□□□□□ -0.58
CA1-223	ENST00000524324	L3MBTL2	Q969R5	705 aa		11.45	□□□□□ -0.58
CA1-223	ENST00000524324	SPATA31E1	Q6ZUB1	1445 aa		11.44	□□□□□ -0.58
CA1-223	ENST00000524324	DCAF11	Q8TEB1	546 aa		11.44	□□□□□ -0.58
CA1-223	ENST00000524324	TMEM2	Q9UHN6	1383 aa		11.43	□□□□□ -0.58
CA1-223	ENST00000524324	ADGRB3	O60242	1522 aa		11.43	□□□□□ -0.58
CA1-223	ENST00000524324	RIMS2	Q9UQ26	1411 aa		11.43	□□□□□ -0.58
CA1-223	ENST00000524324	ZNF142	P52746	1687 aa	Predicted RBP	11.43	□□□□□ -0.58
CA1-223	ENST00000524324	ADGRF5	Q8IZF2	1346 aa		11.42	□□□□□ -0.58
CA1-223	ENST00000524324	ANKLE2	Q86XL3	938 aa		11.42	□□□□□ -0.58
CA1-223	ENST00000524324	BCAN	Q96GW7	911 aa		11.41	□□□□□ -0.58
CA1-223	ENST00000524324	ZNF692	Q9BU19	519 aa	Predicted RBP	11.4	□□□□□ -0.58
CA1-223	ENST00000524324	EID1	Q9Y6B2	187 aa		11.4	□□□□□ -0.58
CA1-223	ENST00000524324	STRC	Q7RTU9	1775 aa		11.4	□□□□□ -0.58
CA1-223	ENST00000524324	RPGRIP1L	Q68CZ1	1315 aa		11.39	□□□□□ -0.59
CA1-223	ENST00000524324	ARHGAP23	Q9P227	1491 aa		11.39	□□□□□ -0.59
CA1-223	ENST00000524324	PPP1R15A	O75807	674 aa	Predicted RBP	11.39	□□□□□ -0.59
CA1-223	ENST00000524324	ZFYVE9	O95405	1425 aa		11.39	□□□□□ -0.59
CA1-223	ENST00000524324	SLC26A8	Q96RN1	970 aa		11.39	□□□□□ -0.59
CA1-223	ENST00000524324	KDM5A	P29375	1690 aa	Known RBP	11.39	□□□□□ -0.59
CA1-223	ENST00000524324	SLIT1	O75093	1534 aa		11.39	□□□□□ -0.59
CA1-223	ENST00000524324	NEXMIF	Q5QGS0	1516 aa		11.39	□□□□□ -0.59
CA1-223	ENST00000524324	HDGF	P51858	240 aa	Known RBP	11.38	□□□□□ -0.59
CA1-223	ENST00000524324	NBPF8	Q3BBV2	869 aa		11.38	□□□□□ -0.59
CA1-223	ENST00000524324	CLSPN	Q9HAW4	1339 aa		11.37	□□□□□ -0.59
CA1-223	ENST00000524324	PPL	O60437	1756 aa		11.37	□□□□□ -0.59
CA1-223	ENST00000524324	VGF	O15240	615 aa	Predicted RBP	11.37	□□□□□ -0.59
CA1-223	ENST00000524324	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
CA1-223	ENST00000524324	CFAP70	Q5T0N1	1121 aa		11.36	□□□□□ -0.59
CA1-223	ENST00000524324	FBXO3	Q9UK99	471 aa		11.36	□□□□□ -0.59
CA1-223	ENST00000524324	TONSL	Q96HA7	1378 aa		11.36	□□□□□ -0.59
CA1-223	ENST00000524324	IFT172	Q9UG01	1749 aa		11.35	□□□□□ -0.59
CA1-223	ENST00000524324	TMEM132E	Q6IEE7	984 aa		11.35	□□□□□ -0.59
CA1-223	ENST00000524324	SCAF11	Q99590	1463 aa	Known RBP	11.35	□□□□□ -0.59
CA1-223	ENST00000524324	NEURL4	Q96JN8	1562 aa		11.35	□□□□□ -0.59
CA1-223	ENST00000524324	SPDYE2B	A6NHP3	402 aa		11.34	□□□□□ -0.59
CA1-223	ENST00000524324	SPDYE6	P0CI01	402 aa		11.34	□□□□□ -0.59
CA1-223	ENST00000524324	SPDYE2	Q495Y8	402 aa		11.34	□□□□□ -0.59
CA1-223	ENST00000524324	NPHP4	O75161	1426 aa	Predicted RBP	11.34	□□□□□ -0.59
CA1-223	ENST00000524324	PLEKHG1	Q9ULL1	1385 aa		11.33	□□□□□ -0.6
CA1-223	ENST00000524324	NBPF1	Q3BBV0	1214 aa		11.33	□□□□□ -0.6
CA1-223	ENST00000524324	POLR1A	O95602	1720 aa	Predicted RBP	11.32	□□□□□ -0.6
CA1-223	ENST00000524324	C14orf93	Q9H972	538 aa	Known RBP	11.32	□□□□□ -0.6
CA1-223	ENST00000524324	ADAMTS13	Q76LX8	1427 aa		11.32	□□□□□ -0.6
CA1-223	ENST00000524324	MED14	O60244	1454 aa		11.32	□□□□□ -0.6
CA1-223	ENST00000524324	MET	P08581	1390 aa		11.31	□□□□□ -0.6
CA1-223	ENST00000524324	PROM2	Q8N271	834 aa		11.31	□□□□□ -0.6
CA1-223	ENST00000524324	TBX22	Q9Y458	520 aa		11.31	□□□□□ -0.6
CA1-223	ENST00000524324	NRXN3	Q9Y4C0	1643 aa		11.31	□□□□□ -0.6
CA1-223	ENST00000524324	IQGAP1	P46940	1657 aa		11.3	□□□□□ -0.6
CA1-223	ENST00000524324	RBM33	Q96EV2	1170 aa	Known RBP	11.3	□□□□□ -0.6
CA1-223	ENST00000524324	STK26	Q9P289	416 aa		11.3	□□□□□ -0.6
CA1-223	ENST00000524324	TIMELESS	Q9UNS1	1208 aa		11.3	□□□□□ -0.6
CA1-223	ENST00000524324	NRXN1	Q9ULB1	1477 aa		11.3	□□□□□ -0.6
CA1-223	ENST00000524324	ALK	Q9UM73	1620 aa		11.29	□□□□□ -0.6
CA1-223	ENST00000524324	MYOM2	P54296	1465 aa		11.29	□□□□□ -0.6
CA1-223	ENST00000524324	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.29	□□□□□ -0.6
CA1-223	ENST00000524324	PIK3C2G	O75747	1445 aa		11.28	□□□□□ -0.6
CA1-223	ENST00000524324	PRAG1	Q86YV5	1406 aa		11.28	□□□□□ -0.6
CA1-223	ENST00000524324	STAC3	Q96MF2	364 aa		11.28	□□□□□ -0.6
CA1-223	ENST00000524324	PTPRU	Q92729	1446 aa		11.27	□□□□□ -0.6
CA1-223	ENST00000524324	AMOTL2	Q9Y2J4	779 aa		11.27	□□□□□ -0.61
CA1-223	ENST00000524324	SETBP1	Q9Y6X0	1596 aa		11.27	□□□□□ -0.61
CA1-223	ENST00000524324	KCNA6	P17658	529 aa		11.25	□□□□□ -0.61
CA1-223	ENST00000524324	WAPL	Q7Z5K2	1190 aa		11.25	□□□□□ -0.61
CA1-223	ENST00000524324	TRAK1	Q9UPV9	953 aa		11.25	□□□□□ -0.61
CA1-223	ENST00000524324	SETD1A	O15047	1707 aa	Known RBP	11.25	□□□□□ -0.61
CA1-223	ENST00000524324	STRCP1	A6NGW2	1772 aa		11.25	□□□□□ -0.61
CA1-223	ENST00000524324	SSUH2	Q9Y2M2	353 aa		11.24	□□□□□ -0.61
CA1-223	ENST00000524324	ASXL1	Q8IXJ9	1541 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms