RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 MROH2AA6NES4 1674 aa7.44□□□□□ -1.22
CLINT1-208ENST00000524306 MYBBP1AQ9BQG0 1328 aaKnown RBP7.43□□□□□ -1.22
CLINT1-208ENST00000524306 MYO3AQ8NEV4 1616 aa7.43□□□□□ -1.22
CLINT1-208ENST00000524306 ADGRB3O60242 1522 aa7.43□□□□□ -1.22
CLINT1-208ENST00000524306 CLTCL1P53675 1640 aa7.43□□□□□ -1.22
CLINT1-208ENST00000524306 SPAG9O60271 1321 aaKnown RBP7.43□□□□□ -1.22
CLINT1-208ENST00000524306 SLC24A1O60721 1099 aa7.43□□□□□ -1.22
CLINT1-208ENST00000524306 CCDC184Q52MB2 194 aa7.43□□□□□ -1.22
CLINT1-208ENST00000524306 DCAF11Q8TEB1 546 aa7.43□□□□□ -1.22
CLINT1-208ENST00000524306 PNISRQ8TF01 805 aaKnown RBP7.43□□□□□ -1.22
CLINT1-208ENST00000524306 ABCC3O15438 1527 aa7.43□□□□□ -1.22
CLINT1-208ENST00000524306 SETBP1Q9Y6X0 1596 aa7.42□□□□□ -1.22
CLINT1-208ENST00000524306 PPP4R2Q9NY27 417 aa7.42□□□□□ -1.22
CLINT1-208ENST00000524306 KANK1Q14678 1352 aa7.41□□□□□ -1.22
CLINT1-208ENST00000524306 NPC1L1Q9UHC9 1359 aa7.41□□□□□ -1.22
CLINT1-208ENST00000524306 ST20-MTHFSA0A0A6YYL1 179 aa7.41□□□□□ -1.22
CLINT1-208ENST00000524306 TESK2Q96S53 571 aa7.41□□□□□ -1.22
CLINT1-208ENST00000524306 PPLO60437 1756 aa7.41□□□□□ -1.22
CLINT1-208ENST00000524306 SYNMO15061 1565 aa7.41□□□□□ -1.22
CLINT1-208ENST00000524306 UGGT1Q9NYU2 1555 aa7.4□□□□□ -1.22
CLINT1-208ENST00000524306 PER1O15534 1290 aaPredicted RBP7.4□□□□□ -1.22
CLINT1-208ENST00000524306 PDE3BQ13370 1112 aa7.4□□□□□ -1.23
CLINT1-208ENST00000524306 NUDCQ9Y266 331 aa7.4□□□□□ -1.23
CLINT1-208ENST00000524306 SCAF11Q99590 1463 aaKnown RBP7.4□□□□□ -1.23
CLINT1-208ENST00000524306 NOS1P29475 1434 aa7.39□□□□□ -1.23
CLINT1-208ENST00000524306 NLRP13Q86W25 1043 aa7.39□□□□□ -1.23
CLINT1-208ENST00000524306 BLMP54132 1417 aaPredicted RBP7.39□□□□□ -1.23
CLINT1-208ENST00000524306 PREX1Q8TCU6 1659 aa7.39□□□□□ -1.23
CLINT1-208ENST00000524306 CDCA8Q53HL2 280 aa7.38□□□□□ -1.23
CLINT1-208ENST00000524306 ZFYVE9O95405 1425 aa7.38□□□□□ -1.23
CLINT1-208ENST00000524306 SBNO2Q9Y2G9 1366 aa7.38□□□□□ -1.23
CLINT1-208ENST00000524306 TMF1P82094 1093 aa7.38□□□□□ -1.23
CLINT1-208ENST00000524306 SIGLEC1Q9BZZ2 1709 aa7.37□□□□□ -1.23
CLINT1-208ENST00000524306 SPATA31D1Q6ZQQ2 1576 aa7.37□□□□□ -1.23
CLINT1-208ENST00000524306 FAM9BQ8IZU0 186 aa7.37□□□□□ -1.23
CLINT1-208ENST00000524306 EIF3AQ14152 1382 aaKnown RBP7.37□□□□□ -1.23
CLINT1-208ENST00000524306 FANCIQ9NVI1 1328 aa7.37□□□□□ -1.23
CLINT1-208ENST00000524306 ZNF326Q5BKZ1 582 aaKnown RBP7.36□□□□□ -1.23
CLINT1-208ENST00000524306 TMC1Q8TDI8 760 aa7.36□□□□□ -1.23
CLINT1-208ENST00000524306 DISP3Q9P2K9 1392 aa7.36□□□□□ -1.23
CLINT1-208ENST00000524306 KDM2AQ9Y2K7 1162 aa7.35□□□□□ -1.23
CLINT1-208ENST00000524306 NBPF1Q3BBV0 1214 aa7.35□□□□□ -1.23
CLINT1-208ENST00000524306 PIK3C2GO75747 1445 aa7.35□□□□□ -1.23
CLINT1-208ENST00000524306 MYOM1P52179 1685 aa7.35□□□□□ -1.23
CLINT1-208ENST00000524306 RBM19Q9Y4C8 960 aaKnown RBP7.34□□□□□ -1.23
CLINT1-208ENST00000524306 TMEM131LA2VDJ0 1609 aa7.34□□□□□ -1.24
CLINT1-208ENST00000524306 ASXL1Q8IXJ9 1541 aa7.33□□□□□ -1.24
CLINT1-208ENST00000524306 NPATQ14207 1427 aa7.33□□□□□ -1.24
CLINT1-208ENST00000524306 BCANQ96GW7 911 aa7.33□□□□□ -1.24
CLINT1-208ENST00000524306 RPGRIP1LQ68CZ1 1315 aa7.33□□□□□ -1.24
CLINT1-208ENST00000524306 PUS7Q96PZ0 661 aaKnown RBP7.33□□□□□ -1.24
CLINT1-208ENST00000524306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.33□□□□□ -1.24
CLINT1-208ENST00000524306 AFAP1Q8N556 730 aa7.32□□□□□ -1.24
CLINT1-208ENST00000524306 NGEFQ8N5V2 710 aa7.32□□□□□ -1.24
CLINT1-208ENST00000524306 USP32Q8NFA0 1604 aa7.32□□□□□ -1.24
CLINT1-208ENST00000524306 NEXMIFQ5QGS0 1516 aa7.32□□□□□ -1.24
CLINT1-208ENST00000524306 KNDC1Q76NI1 1749 aa7.31□□□□□ -1.24
CLINT1-208ENST00000524306 RGL3Q3MIN7 710 aa7.31□□□□□ -1.24
CLINT1-208ENST00000524306 SETD1AO15047 1707 aaKnown RBP7.3□□□□□ -1.24
CLINT1-208ENST00000524306 CLTCQ00610 1675 aaKnown RBP7.3□□□□□ -1.24
CLINT1-208ENST00000524306 ANP32EQ9BTT0 268 aa7.3□□□□□ -1.24
CLINT1-208ENST00000524306 PANK3Q9H999 370 aa7.3□□□□□ -1.24
CLINT1-208ENST00000524306 ADGRB1O14514 1584 aa7.3□□□□□ -1.24
CLINT1-208ENST00000524306 ERVK-7P63135 1459 aa7.29□□□□□ -1.24
CLINT1-208ENST00000524306 TSPOAP1O95153 1857 aa7.29□□□□□ -1.24
CLINT1-208ENST00000524306 AMER1Q5JTC6 1135 aaPredicted RBP7.29□□□□□ -1.24
CLINT1-208ENST00000524306 NCBP3Q53F19 620 aaKnown RBP7.29□□□□□ -1.24
CLINT1-208ENST00000524306 POTEHQ6S545 545 aa7.28□□□□□ -1.24
CLINT1-208ENST00000524306 YEATS2Q9ULM3 1422 aa7.28□□□□□ -1.24
CLINT1-208ENST00000524306 DLC1Q96QB1 1528 aa7.28□□□□□ -1.24
CLINT1-208ENST00000524306 KIF3BO15066 747 aa7.28□□□□□ -1.24
CLINT1-208ENST00000524306 RRP1P56182 461 aaKnown RBP7.28□□□□□ -1.24
CLINT1-208ENST00000524306 ARHGEF28Q8N1W1 1705 aaKnown RBP7.27□□□□□ -1.24
CLINT1-208ENST00000524306 POLR3GLQ9BT43 218 aa7.27□□□□□ -1.25
CLINT1-208ENST00000524306 ZNF521Q96K83 1311 aa7.27□□□□□ -1.25
CLINT1-208ENST00000524306 KNSTRNQ9Y448 316 aa7.26□□□□□ -1.25
CLINT1-208ENST00000524306 ZNF142P52746 1687 aaPredicted RBP7.26□□□□□ -1.25
CLINT1-208ENST00000524306 PPP2R1AP30153 589 aa7.26□□□□□ -1.25
CLINT1-208ENST00000524306 C14orf93Q9H972 538 aaKnown RBP7.26□□□□□ -1.25
CLINT1-208ENST00000524306 SLC52A1Q9NWF4 448 aa7.26□□□□□ -1.25
CLINT1-208ENST00000524306 RCAN3Q9UKA8 241 aa7.26□□□□□ -1.25
CLINT1-208ENST00000524306 MYO5BQ9ULV0 1848 aa7.25□□□□□ -1.25
CLINT1-208ENST00000524306 DIP2AQ14689 1571 aa7.25□□□□□ -1.25
CLINT1-208ENST00000524306 POLR3AO14802 1390 aaPredicted RBP7.25□□□□□ -1.25
CLINT1-208ENST00000524306 NINLQ9Y2I6 1382 aa7.25□□□□□ -1.25
CLINT1-208ENST00000524306 QRICH2Q9H0J4 1663 aa7.25□□□□□ -1.25
CLINT1-208ENST00000524306 UBR1Q8IWV7 1749 aa7.25□□□□□ -1.25
CLINT1-208ENST00000524306 NLRP1Q9C000 1473 aa7.25□□□□□ -1.25
CLINT1-208ENST00000524306 NSD2O96028 1365 aa7.24□□□□□ -1.25
CLINT1-208ENST00000524306 CYB5RLQ6IPT4 315 aa7.24□□□□□ -1.25
CLINT1-208ENST00000524306 TRMT2AQ8IZ69 625 aaKnown RBP7.24□□□□□ -1.25
CLINT1-208ENST00000524306 MS4A1P11836 297 aa7.24□□□□□ -1.25
CLINT1-208ENST00000524306 IRX6P78412 446 aaPredicted RBP7.24□□□□□ -1.25
CLINT1-208ENST00000524306 FAM69CQ0P6D2 419 aa7.24□□□□□ -1.25
CLINT1-208ENST00000524306 FER1L4A9Z1Z3 1794 aa7.23□□□□□ -1.25
CLINT1-208ENST00000524306 B4GALNT3Q6L9W6 998 aa7.23□□□□□ -1.25
CLINT1-208ENST00000524306 ADGRF5Q8IZF2 1346 aa7.23□□□□□ -1.25
CLINT1-208ENST00000524306 RIMS1Q86UR5 1692 aaKnown RBP7.23□□□□□ -1.25
CLINT1-208ENST00000524306 CCDC136Q96JN2 1154 aa7.23□□□□□ -1.25
CLINT1-208ENST00000524306 MYT1LQ9UL68 1186 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms