RNA–Protein interactions for RNA: ENST00000523805.5

PTK2-253, Transcript of protein tyrosine kinase 2, humanhuman

TSL 3

Gene PTK2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-253ENST00000523805 FAM205CA6NFA0 338 aa13.08□□□□□ -0.32
PTK2-253ENST00000523805 MYT1LQ9UL68 1186 aa13.08□□□□□ -0.32
PTK2-253ENST00000523805 CDK11AQ9UQ88 783 aaPredicted RBP13.08□□□□□ -0.32
PTK2-253ENST00000523805 ZNF710Q8N1W2 664 aa13.07□□□□□ -0.32
PTK2-253ENST00000523805 CCDC18Q5T9S5 1454 aa13.07□□□□□ -0.32
PTK2-253ENST00000523805 SPNS2Q8IVW8 549 aa13.06□□□□□ -0.32
PTK2-253ENST00000523805 KRTAP3-3Q9BYR6 98 aa13.06□□□□□ -0.32
PTK2-253ENST00000523805 KRTAP3-2Q9BYR7 98 aa13.06□□□□□ -0.32
PTK2-253ENST00000523805 ABCA6Q8N139 1617 aa13.06□□□□□ -0.32
PTK2-253ENST00000523805 CASKIN1Q8WXD9 1431 aa13.05□□□□□ -0.32
PTK2-253ENST00000523805 MAGI2Q86UL8 1455 aa13.05□□□□□ -0.32
PTK2-253ENST00000523805 EFCAB2Q5VUJ9 269 aa13.05□□□□□ -0.32
PTK2-253ENST00000523805 LMTK3Q96Q04 1460 aa13.04□□□□□ -0.32
PTK2-253ENST00000523805 DIP2CQ9Y2E4 1556 aa13.04□□□□□ -0.32
PTK2-253ENST00000523805 C9orf84Q5VXU9 1444 aa13.04□□□□□ -0.32
PTK2-253ENST00000523805 ZNF518AQ6AHZ1 1483 aa13.04□□□□□ -0.32
PTK2-253ENST00000523805 FYCO1Q9BQS8 1478 aa13.04□□□□□ -0.32
PTK2-253ENST00000523805 ABCC1P33527 1531 aa13.03□□□□□ -0.32
PTK2-253ENST00000523805 KDM5CP41229 1560 aa13.03□□□□□ -0.32
PTK2-253ENST00000523805 RIMBP2O15034 1052 aa13.03□□□□□ -0.32
PTK2-253ENST00000523805 ATP10AO60312 1499 aa13.03□□□□□ -0.32
PTK2-253ENST00000523805 MMRN1Q13201 1228 aa13.02□□□□□ -0.33
PTK2-253ENST00000523805 ZSWIM6Q9HCJ5 1215 aa13.02□□□□□ -0.33
PTK2-253ENST00000523805 HSPA2P54652 639 aa13.01□□□□□ -0.33
PTK2-253ENST00000523805 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
PTK2-253ENST00000523805 PREX1Q8TCU6 1659 aa13□□□□□ -0.33
PTK2-253ENST00000523805 ARHGEF12Q9NZN5 1544 aa13□□□□□ -0.33
PTK2-253ENST00000523805 KIDINS220Q9ULH0 1771 aa12.99□□□□□ -0.33
PTK2-253ENST00000523805 SAMD9LQ8IVG5 1584 aa12.99□□□□□ -0.33
PTK2-253ENST00000523805 ZNF777Q9ULD5 760 aaPredicted RBP12.99□□□□□ -0.33
PTK2-253ENST00000523805 SYCP2Q9BX26 1530 aa12.98□□□□□ -0.33
PTK2-253ENST00000523805 TRAPPC8Q9Y2L5 1435 aa12.98□□□□□ -0.33
PTK2-253ENST00000523805 SUPT6HQ7KZ85 1726 aaKnown RBP12.98□□□□□ -0.33
PTK2-253ENST00000523805 GPR153Q6NV75 609 aa12.97□□□□□ -0.33
PTK2-253ENST00000523805 C3P01024 1663 aa12.96□□□□□ -0.33
PTK2-253ENST00000523805 CEBPAP49715 358 aaPredicted RBP12.96□□□□□ -0.33
PTK2-253ENST00000523805 KIF3CO14782 793 aa12.95□□□□□ -0.34
PTK2-253ENST00000523805 ERBB3P21860 1342 aa12.94□□□□□ -0.34
PTK2-253ENST00000523805 REREQ9P2R6 1566 aa12.94□□□□□ -0.34
PTK2-253ENST00000523805 MLH3Q9UHC1 1453 aa12.92□□□□□ -0.34
PTK2-253ENST00000523805 TIAM1Q13009 1591 aa12.92□□□□□ -0.34
PTK2-253ENST00000523805 GPATCH8Q9UKJ3 1502 aaKnown RBP12.92□□□□□ -0.34
PTK2-253ENST00000523805 MTUS2Q5JR59 1369 aa12.92□□□□□ -0.34
PTK2-253ENST00000523805 CEP162Q5TB80 1403 aa12.91□□□□□ -0.34
PTK2-253ENST00000523805 ATP7AQ04656 1500 aa12.91□□□□□ -0.34
PTK2-253ENST00000523805 EHBP1L1Q8N3D4 1523 aa12.91□□□□□ -0.34
PTK2-253ENST00000523805 INO80Q9ULG1 1556 aaPredicted RBP12.9□□□□□ -0.34
PTK2-253ENST00000523805 VARS2Q5ST30 1063 aaKnown RBP12.9□□□□□ -0.34
PTK2-253ENST00000523805 CCNB3Q8WWL7 1395 aa12.9□□□□□ -0.34
PTK2-253ENST00000523805 CLTCQ00610 1675 aaKnown RBP12.89□□□□□ -0.35
PTK2-253ENST00000523805 HNRNPMP52272 730 aaKnown RBP eCLIP12.89□□□□□ -0.352e-6■■■□□ 17.1
PTK2-253ENST00000523805 C2orf72A6NCS6 295 aa12.88□□□□□ -0.35
PTK2-253ENST00000523805 ESF1Q9H501 851 aaKnown RBP12.88□□□□□ -0.35
PTK2-253ENST00000523805 STRCQ7RTU9 1775 aa12.88□□□□□ -0.35
PTK2-253ENST00000523805 AGLP35573 1532 aa12.88□□□□□ -0.35
PTK2-253ENST00000523805 CFDP1Q9UEE9 299 aaPredicted RBP12.87□□□□□ -0.35
PTK2-253ENST00000523805 UHRF1BP1Q6BDS2 1440 aa12.87□□□□□ -0.35
PTK2-253ENST00000523805 SETD1BQ9UPS6 1966 aaKnown RBP12.87□□□□□ -0.35
PTK2-253ENST00000523805 SPAG9O60271 1321 aaKnown RBP12.87□□□□□ -0.35
PTK2-253ENST00000523805 ADGBQ8N7X0 1667 aa12.86□□□□□ -0.35
PTK2-253ENST00000523805 HS6ST3Q8IZP7 471 aa12.86□□□□□ -0.35
PTK2-253ENST00000523805 MROH2AA6NES4 1674 aa12.86□□□□□ -0.35
PTK2-253ENST00000523805 ARSIQ5FYB1 569 aa12.85□□□□□ -0.35
PTK2-253ENST00000523805 FBXO41Q8TF61 875 aa12.85□□□□□ -0.35
PTK2-253ENST00000523805 PPP1R37O75864 691 aa12.84□□□□□ -0.35
PTK2-253ENST00000523805 ZNF644Q9H582 1327 aaPredicted RBP12.84□□□□□ -0.35
PTK2-253ENST00000523805 PLEKHH2Q8IVE3 1493 aa12.84□□□□□ -0.35
PTK2-253ENST00000523805 PLXNC1O60486 1568 aa12.83□□□□□ -0.36
PTK2-253ENST00000523805 ZNF687Q8N1G0 1237 aa12.83□□□□□ -0.36
PTK2-253ENST00000523805 A2MP01023 1474 aa12.82□□□□□ -0.36
PTK2-253ENST00000523805 MYO3AQ8NEV4 1616 aa12.81□□□□□ -0.36
PTK2-253ENST00000523805 NCOA2Q15596 1464 aa12.81□□□□□ -0.36
PTK2-253ENST00000523805 CAMSAP2Q08AD1 1489 aa12.8□□□□□ -0.36
PTK2-253ENST00000523805 LOC105371045A0A1W2PR82 267 aa12.8□□□□□ -0.36
PTK2-253ENST00000523805 KHSRPQ92945 711 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTK2-253ENST00000523805 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
PTK2-253ENST00000523805 KIAA1107Q9UPP5 1409 aa12.79□□□□□ -0.36
PTK2-253ENST00000523805 SLC34A2O95436 690 aa12.79□□□□□ -0.36
PTK2-253ENST00000523805 ZNF316A6NFI3 1004 aaPredicted RBP12.78□□□□□ -0.36
PTK2-253ENST00000523805 GGT6Q6P531 493 aa12.78□□□□□ -0.36
PTK2-253ENST00000523805 CAMSAP1Q5T5Y3 1602 aa12.77□□□□□ -0.36
PTK2-253ENST00000523805 ZNF142P52746 1687 aaPredicted RBP12.77□□□□□ -0.36
PTK2-253ENST00000523805 TMC2Q8TDI7 906 aa12.77□□□□□ -0.37
PTK2-253ENST00000523805 CERKQ8TCT0 537 aa12.76□□□□□ -0.37
PTK2-253ENST00000523805 CCDC141Q6ZP82 1450 aa12.76□□□□□ -0.37
PTK2-253ENST00000523805 MBD5Q9P267 1494 aa12.76□□□□□ -0.37
PTK2-253ENST00000523805 ZMYM3Q14202 1370 aa12.75□□□□□ -0.37
PTK2-253ENST00000523805 VPS8Q8N3P4 1428 aa12.75□□□□□ -0.37
PTK2-253ENST00000523805 CEP170BQ9Y4F5 1589 aaPredicted RBP12.74□□□□□ -0.37
PTK2-253ENST00000523805 LRRC9Q6ZRR7 1453 aa12.72□□□□□ -0.37
PTK2-253ENST00000523805 NPATQ14207 1427 aa12.72□□□□□ -0.37
PTK2-253ENST00000523805 NCOA1Q15788 1441 aa12.72□□□□□ -0.37
PTK2-253ENST00000523805 PCDHGA4Q9Y5G9 962 aa12.72□□□□□ -0.37
PTK2-253ENST00000523805 CFAP65Q6ZU64 1925 aaKnown RBP12.71□□□□□ -0.37
PTK2-253ENST00000523805 NUDT7P0C024 238 aa12.71□□□□□ -0.37
PTK2-253ENST00000523805 ARHGEF5Q12774 1597 aa12.71□□□□□ -0.37
PTK2-253ENST00000523805 POLR1AO95602 1720 aaPredicted RBP12.71□□□□□ -0.38
PTK2-253ENST00000523805 PTPRKQ15262 1439 aa12.71□□□□□ -0.38
PTK2-253ENST00000523805 CHGAP10645 457 aaKnown RBP12.7□□□□□ -0.38
PTK2-253ENST00000523805 CEP152O94986 1710 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms