RNA–Protein interactions for RNA: ENST00000523799.5

CCNC-215, Transcript of cyclin C, humanhuman

TSL 3 BASIC

Gene CCNC, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-215ENST00000523799 SLIT1O75093 1534 aa13.6□□□□□ -0.23
CCNC-215ENST00000523799 PHLPP1O60346 1717 aa13.6□□□□□ -0.23
CCNC-215ENST00000523799 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
CCNC-215ENST00000523799 TIAM1Q13009 1591 aa13.6□□□□□ -0.23
CCNC-215ENST00000523799 RSPH4AQ5TD94 716 aa13.6□□□□□ -0.23
CCNC-215ENST00000523799 ERVK-7P63135 1459 aa13.6□□□□□ -0.23
CCNC-215ENST00000523799 CCDC141Q6ZP82 1450 aa13.6□□□□□ -0.23
CCNC-215ENST00000523799 ARHGAP23Q9P227 1491 aa13.6□□□□□ -0.23
CCNC-215ENST00000523799 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
CCNC-215ENST00000523799 JCADQ9P266 1359 aa13.59□□□□□ -0.23
CCNC-215ENST00000523799 CFAP65Q6ZU64 1925 aaKnown RBP13.59□□□□□ -0.23
CCNC-215ENST00000523799 TXNDC2Q86VQ3 553 aa13.59□□□□□ -0.23
CCNC-215ENST00000523799 TMEM94Q12767 1356 aa13.58□□□□□ -0.23
CCNC-215ENST00000523799 LTKP29376 864 aa13.58□□□□□ -0.24
CCNC-215ENST00000523799 ZNF772Q68DY9 489 aaPredicted RBP13.58□□□□□ -0.24
CCNC-215ENST00000523799 EID1Q9Y6B2 187 aa13.58□□□□□ -0.24
CCNC-215ENST00000523799 ABCC3O15438 1527 aa13.58□□□□□ -0.24
CCNC-215ENST00000523799 NCOA2Q15596 1464 aa13.56□□□□□ -0.24
CCNC-215ENST00000523799 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
CCNC-215ENST00000523799 MAP3K1Q13233 1512 aa13.54□□□□□ -0.24
CCNC-215ENST00000523799 KCNA6P17658 529 aa13.54□□□□□ -0.24
CCNC-215ENST00000523799 TRIM52Q96A61 297 aa13.54□□□□□ -0.24
CCNC-215ENST00000523799 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
CCNC-215ENST00000523799 SPATA31A6Q5VVP1 1343 aa13.54□□□□□ -0.24
CCNC-215ENST00000523799 EIF2AK4Q9P2K8 1649 aaKnown RBP13.53□□□□□ -0.24
CCNC-215ENST00000523799 PROSER2Q86WR7 435 aaPredicted RBP13.53□□□□□ -0.24
CCNC-215ENST00000523799 CDK12Q9NYV4 1490 aaPredicted RBP13.53□□□□□ -0.24
CCNC-215ENST00000523799 TSPY4P0CV99 314 aa13.52□□□□□ -0.25
CCNC-215ENST00000523799 TSPY10P0CW01 314 aa13.52□□□□□ -0.25
CCNC-215ENST00000523799 MEX3CQ5U5Q3 659 aaKnown RBP13.52□□□□□ -0.25
CCNC-215ENST00000523799 SLAIN2Q9P270 581 aa13.52□□□□□ -0.25
CCNC-215ENST00000523799 MSH6P52701 1360 aa13.52□□□□□ -0.25
CCNC-215ENST00000523799 FGD6Q6ZV73 1430 aa13.52□□□□□ -0.25
CCNC-215ENST00000523799 PRDM15P57071 1507 aaPredicted RBP13.52□□□□□ -0.25
CCNC-215ENST00000523799 EHBP1L1Q8N3D4 1523 aa13.52□□□□□ -0.25
CCNC-215ENST00000523799 COL16A1Q07092 1604 aaPredicted RBP13.52□□□□□ -0.25
CCNC-215ENST00000523799 CEP152O94986 1710 aa13.52□□□□□ -0.25
CCNC-215ENST00000523799 KDM5AP29375 1690 aaKnown RBP13.51□□□□□ -0.25
CCNC-215ENST00000523799 ARHGEF5Q12774 1597 aa13.51□□□□□ -0.25
CCNC-215ENST00000523799 NKTRP30414 1462 aaKnown RBP13.51□□□□□ -0.25
CCNC-215ENST00000523799 CAMSAP2Q08AD1 1489 aa13.51□□□□□ -0.25
CCNC-215ENST00000523799 CEP162Q5TB80 1403 aa13.51□□□□□ -0.25
CCNC-215ENST00000523799 RXRBP28702 533 aa13.51□□□□□ -0.25
CCNC-215ENST00000523799 TMEM2Q9UHN6 1383 aa13.5□□□□□ -0.25
CCNC-215ENST00000523799 LRP6O75581 1613 aa13.5□□□□□ -0.25
CCNC-215ENST00000523799 SHPRHQ149N8 1683 aa13.49□□□□□ -0.25
CCNC-215ENST00000523799 TET3O43151 1660 aa13.48□□□□□ -0.25
CCNC-215ENST00000523799 PIK3C2BO00750 1634 aa13.48□□□□□ -0.25
CCNC-215ENST00000523799 MROH1Q8NDA8 1641 aa13.48□□□□□ -0.25
CCNC-215ENST00000523799 NWD1Q149M9 1564 aa13.48□□□□□ -0.25
CCNC-215ENST00000523799 ARHGAP31Q2M1Z3 1444 aa13.47□□□□□ -0.25
CCNC-215ENST00000523799 GABBR2O75899 941 aa13.47□□□□□ -0.25
CCNC-215ENST00000523799 RBM33Q96EV2 1170 aaKnown RBP13.46□□□□□ -0.25
CCNC-215ENST00000523799 MAST1Q9Y2H9 1570 aa13.45□□□□□ -0.26
CCNC-215ENST00000523799 SLC26A8Q96RN1 970 aa13.45□□□□□ -0.26
CCNC-215ENST00000523799 EFCAB6Q5THR3 1501 aa13.44□□□□□ -0.26
CCNC-215ENST00000523799 AHDC1Q5TGY3 1603 aaPredicted RBP13.43□□□□□ -0.26
CCNC-215ENST00000523799 CHD2O14647 1828 aaKnown RBP13.43□□□□□ -0.26
CCNC-215ENST00000523799 NCOA3Q9Y6Q9 1424 aa13.41□□□□□ -0.26
CCNC-215ENST00000523799 FBXO3Q9UK99 471 aa13.41□□□□□ -0.26
CCNC-215ENST00000523799 DUOX2Q9NRD8 1548 aa13.4□□□□□ -0.26
CCNC-215ENST00000523799 AFF2P51816 1311 aa13.39□□□□□ -0.27
CCNC-215ENST00000523799 CADPS2Q86UW7 1296 aa13.38□□□□□ -0.27
CCNC-215ENST00000523799 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
CCNC-215ENST00000523799 FARP1Q9Y4F1 1045 aaPredicted RBP13.38□□□□□ -0.27
CCNC-215ENST00000523799 EP400Q96L91 3159 aa13.38□□□□□ -0.27
CCNC-215ENST00000523799 RBM6P78332 1123 aaKnown RBP13.37□□□□□ -0.27
CCNC-215ENST00000523799 IDI1Q13907 227 aa13.37□□□□□ -0.27
CCNC-215ENST00000523799 BCANQ96GW7 911 aa13.37□□□□□ -0.27
CCNC-215ENST00000523799 RGS12O14924 1447 aa13.37□□□□□ -0.27
CCNC-215ENST00000523799 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.36□□□□□ -0.27
CCNC-215ENST00000523799 NUTM2BA6NNL0 878 aaPredicted RBP13.36□□□□□ -0.27
CCNC-215ENST00000523799 NUTM2EB1AL46 878 aaPredicted RBP13.36□□□□□ -0.27
CCNC-215ENST00000523799 NUTM2DQ5VT03 806 aaPredicted RBP13.36□□□□□ -0.27
CCNC-215ENST00000523799 NUTM2AQ8IVF1 878 aaPredicted RBP13.36□□□□□ -0.27
CCNC-215ENST00000523799 DIP2AQ14689 1571 aa13.36□□□□□ -0.27
CCNC-215ENST00000523799 ADGRB3O60242 1522 aa13.35□□□□□ -0.27
CCNC-215ENST00000523799 CD44P16070 742 aaKnown RBP13.35□□□□□ -0.27
CCNC-215ENST00000523799 ATF3P18847 181 aa13.35□□□□□ -0.27
CCNC-215ENST00000523799 C14orf37Q86TY3 774 aa13.35□□□□□ -0.27
CCNC-215ENST00000523799 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
CCNC-215ENST00000523799 ATAD2Q6PL18 1390 aa13.34□□□□□ -0.27
CCNC-215ENST00000523799 ERBINQ96RT1 1412 aa13.34□□□□□ -0.27
CCNC-215ENST00000523799 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
CCNC-215ENST00000523799 QTRT2Q9H974 415 aaKnown RBP13.34□□□□□ -0.27
CCNC-215ENST00000523799 KANK1Q14678 1352 aa13.33□□□□□ -0.27
CCNC-215ENST00000523799 NGLY1Q96IV0 654 aa13.33□□□□□ -0.28
CCNC-215ENST00000523799 PLEKHG1Q9ULL1 1385 aa13.32□□□□□ -0.28
CCNC-215ENST00000523799 HDGFP51858 240 aaKnown RBP13.32□□□□□ -0.28
CCNC-215ENST00000523799 LMTK2Q8IWU2 1503 aa13.31□□□□□ -0.28
CCNC-215ENST00000523799 SLC52A1Q9NWF4 448 aa13.31□□□□□ -0.28
CCNC-215ENST00000523799 TBX22Q9Y458 520 aa13.31□□□□□ -0.28
CCNC-215ENST00000523799 SETD5Q9C0A6 1442 aa13.3□□□□□ -0.28
CCNC-215ENST00000523799 SETBP1Q9Y6X0 1596 aa13.3□□□□□ -0.28
CCNC-215ENST00000523799 BRINP3Q76B58 766 aa13.3□□□□□ -0.28
CCNC-215ENST00000523799 KIF15Q9NS87 1388 aa13.3□□□□□ -0.28
CCNC-215ENST00000523799 NOS1P29475 1434 aa13.3□□□□□ -0.28
CCNC-215ENST00000523799 CLCN6P51797 869 aa13.29□□□□□ -0.28
CCNC-215ENST00000523799 LRRC59Q96AG4 307 aaKnown RBP13.29□□□□□ -0.28
CCNC-215ENST00000523799 C8orf37Q96NL8 207 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms