RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 PKDCCQ504Y2 493 aa8.94□□□□□ -0.98
PCM1-217ENST00000522998 TLL1O43897 1013 aa8.93□□□□□ -0.98
PCM1-217ENST00000522998 EMID1Q96A84 441 aaPredicted RBP8.93□□□□□ -0.98
PCM1-217ENST00000522998 KMT5BQ4FZB7 885 aa8.92□□□□□ -0.98
PCM1-217ENST00000522998 SPRYD7Q5W111 196 aa8.92□□□□□ -0.98
PCM1-217ENST00000522998 ANKLE1Q8NAG6 615 aa8.92□□□□□ -0.98
PCM1-217ENST00000522998 RBM46Q8TBY0 533 aaKnown RBP8.92□□□□□ -0.98
PCM1-217ENST00000522998 DGAT1O75907 488 aa8.91□□□□□ -0.98
PCM1-217ENST00000522998 ZNF598Q86UK7 904 aaKnown RBP8.91□□□□□ -0.98
PCM1-217ENST00000522998 ACTN4O43707 911 aaKnown RBP8.9□□□□□ -0.98
PCM1-217ENST00000522998 MLLT3P42568 568 aaPredicted RBP8.9□□□□□ -0.98
PCM1-217ENST00000522998 MYT1Q01538 1121 aa8.9□□□□□ -0.98
PCM1-217ENST00000522998 TMEM134Q9H6X4 195 aa8.9□□□□□ -0.98
PCM1-217ENST00000522998 PPEF1O14829 653 aaPredicted RBP8.89□□□□□ -0.99
PCM1-217ENST00000522998 S1PR4O95977 384 aa8.89□□□□□ -0.99
PCM1-217ENST00000522998 PRR20EP86478 221 aa8.89□□□□□ -0.99
PCM1-217ENST00000522998 PRR20CP86479 221 aa8.89□□□□□ -0.99
PCM1-217ENST00000522998 PRR20DP86480 221 aa8.89□□□□□ -0.99
PCM1-217ENST00000522998 PRR20BP86481 221 aa8.89□□□□□ -0.99
PCM1-217ENST00000522998 PRR20AP86496 221 aa8.89□□□□□ -0.99
PCM1-217ENST00000522998 PTGDRQ13258 359 aa8.89□□□□□ -0.99
PCM1-217ENST00000522998 CFHP08603 1231 aa8.88□□□□□ -0.99
PCM1-217ENST00000522998 ZNF697Q5TEC3 545 aa8.88□□□□□ -0.99
PCM1-217ENST00000522998 ADGRG1Q9Y653 693 aa8.88□□□□□ -0.99
PCM1-217ENST00000522998 RCCD1A6NED2 376 aa8.87□□□□□ -0.99
PCM1-217ENST00000522998 LIAT1Q6ZQX7 453 aa8.87□□□□□ -0.99
PCM1-217ENST00000522998 ARHGEF1Q92888 912 aaKnown RBP8.87□□□□□ -0.99
PCM1-217ENST00000522998 FAM187AA6NFU0 413 aa8.86□□□□□ -0.99
PCM1-217ENST00000522998 ADH1BP00325 375 aa8.86□□□□□ -0.99
PCM1-217ENST00000522998 TNFRSF10AO00220 468 aa8.85□□□□□ -0.99
PCM1-217ENST00000522998 NR1I2O75469 434 aa8.85□□□□□ -0.99
PCM1-217ENST00000522998 NUTM2FA1L443 756 aa8.84□□□□□ -0.99
PCM1-217ENST00000522998 FAM161AQ3B820 660 aa8.84□□□□□ -0.99
PCM1-217ENST00000522998 POTECB2RU33 542 aa8.83□□□□□ -1
PCM1-217ENST00000522998 GDF9O60383 454 aa8.83□□□□□ -1
PCM1-217ENST00000522998 SLC6A16Q9GZN6 736 aa8.83□□□□□ -1
PCM1-217ENST00000522998 SLC10A3P09131 477 aa8.82□□□□□ -1
PCM1-217ENST00000522998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.81□□□□□ -1
PCM1-217ENST00000522998 KCNV2Q8TDN2 545 aa8.81□□□□□ -1
PCM1-217ENST00000522998 AMER1Q5JTC6 1135 aaPredicted RBP8.8□□□□□ -1
PCM1-217ENST00000522998 PLA2G2CQ5R387 149 aa8.79□□□□□ -1
PCM1-217ENST00000522998 ST8SIA5O15466 376 aa8.78□□□□□ -1
PCM1-217ENST00000522998 FCHSD2O94868 740 aa8.78□□□□□ -1
PCM1-217ENST00000522998 SCUBE3Q8IX30 993 aa8.78□□□□□ -1
PCM1-217ENST00000522998 RSPH4AQ5TD94 716 aa8.77□□□□□ -1.01
PCM1-217ENST00000522998 OATP04181 439 aa8.76□□□□□ -1.01
PCM1-217ENST00000522998 FOXC1Q12948 553 aa8.76□□□□□ -1.01
PCM1-217ENST00000522998 PUS10Q3MIT2 529 aaKnown RBP8.76□□□□□ -1.01
PCM1-217ENST00000522998 LMOD2Q6P5Q4 547 aa8.76□□□□□ -1.01
PCM1-217ENST00000522998 PXYLP1Q8TE99 480 aa8.76□□□□□ -1.01
PCM1-217ENST00000522998 SPSB2Q99619 263 aa8.76□□□□□ -1.01
PCM1-217ENST00000522998 AAASQ9NRG9 546 aa8.76□□□□□ -1.01
PCM1-217ENST00000522998 PKD2L1Q9P0L9 805 aa8.75□□□□□ -1.01
PCM1-217ENST00000522998 TSHZ2Q9NRE2 1034 aa8.74□□□□□ -1.01
PCM1-217ENST00000522998 TREML4Q6UXN2 200 aa8.73□□□□□ -1.01
PCM1-217ENST00000522998 RPIAP49247 311 aa8.72□□□□□ -1.01
PCM1-217ENST00000522998 RTN4Q9NQC3 1192 aaKnown RBP8.72□□□□□ -1.01
PCM1-217ENST00000522998 METTL3Q86U44 580 aaKnown RBP8.71□□□□□ -1.02
PCM1-217ENST00000522998 CRIPAKQ8N1N5 446 aa8.7□□□□□ -1.02
PCM1-217ENST00000522998 CD2BP2O95400 341 aaKnown RBP8.69□□□□□ -1.02
PCM1-217ENST00000522998 HIC1Q14526 733 aa8.69□□□□□ -1.02
PCM1-217ENST00000522998 RDH13Q8NBN7 331 aa8.69□□□□□ -1.02
PCM1-217ENST00000522998 FCF1Q9Y324 198 aaKnown RBP8.69□□□□□ -1.02
PCM1-217ENST00000522998 SEMA3EO15041 775 aa8.68□□□□□ -1.02
PCM1-217ENST00000522998 MORN1Q5T089 497 aa8.68□□□□□ -1.02
PCM1-217ENST00000522998 LCE2AQ5TA79 106 aaPredicted RBP8.68□□□□□ -1.02
PCM1-217ENST00000522998 P3H3Q8IVL6 736 aa8.68□□□□□ -1.02
PCM1-217ENST00000522998 CYP4X1Q8N118 509 aa8.68□□□□□ -1.02
PCM1-217ENST00000522998 TOR4AQ9NXH8 423 aa8.68□□□□□ -1.02
PCM1-217ENST00000522998 AXIN1O15169 862 aa8.67□□□□□ -1.02
PCM1-217ENST00000522998 AVPP01185 164 aa8.67□□□□□ -1.02
PCM1-217ENST00000522998 DACH1Q9UI36 760 aa8.67□□□□□ -1.02
PCM1-217ENST00000522998 FMNL1O95466 1100 aaPredicted RBP8.66□□□□□ -1.02
PCM1-217ENST00000522998 FUT2Q10981 343 aa8.66□□□□□ -1.02
PCM1-217ENST00000522998 THAP11Q96EK4 314 aa8.66□□□□□ -1.02
PCM1-217ENST00000522998 DAXXQ9UER7 740 aaPredicted RBP8.66□□□□□ -1.02
PCM1-217ENST00000522998 ATP6V1AP38606 617 aa8.65□□□□□ -1.02
PCM1-217ENST00000522998 CTC1Q2NKJ3 1217 aa8.65□□□□□ -1.02
PCM1-217ENST00000522998 GMPR2Q9P2T1 348 aaKnown RBP8.65□□□□□ -1.02
PCM1-217ENST00000522998 DDX11L8A8MPP1 907 aa8.64□□□□□ -1.03
PCM1-217ENST00000522998 C11orf95C9JLR9 678 aaPredicted RBP8.64□□□□□ -1.03
PCM1-217ENST00000522998 FAM160A2Q8N612 972 aaPredicted RBP8.64□□□□□ -1.03
PCM1-217ENST00000522998 SLC27A5Q9Y2P5 690 aa8.64□□□□□ -1.03
PCM1-217ENST00000522998 WFS1O76024 890 aa8.63□□□□□ -1.03
PCM1-217ENST00000522998 TTC24A2A3L6 582 aaPredicted RBP8.62□□□□□ -1.03
PCM1-217ENST00000522998 ZBTB24O43167 697 aaPredicted RBP8.62□□□□□ -1.03
PCM1-217ENST00000522998 PRDM9Q9NQV7 894 aa8.62□□□□□ -1.03
PCM1-217ENST00000522998 GNPATO15228 680 aa8.61□□□□□ -1.03
PCM1-217ENST00000522998 FECHP22830 423 aa8.61□□□□□ -1.03
PCM1-217ENST00000522998 SMCPP49901 116 aaPredicted RBP8.61□□□□□ -1.03
PCM1-217ENST00000522998 RBM26Q5T8P6 1007 aaKnown RBP8.61□□□□□ -1.03
PCM1-217ENST00000522998 SALL2Q9Y467 1007 aaPredicted RBP8.61□□□□□ -1.03
PCM1-217ENST00000522998 GCGRP47871 477 aa8.6□□□□□ -1.03
PCM1-217ENST00000522998 SULF1Q8IWU6 871 aa8.6□□□□□ -1.03
PCM1-217ENST00000522998 NLRP7Q8WX94 980 aa8.6□□□□□ -1.03
PCM1-217ENST00000522998 BRICD5Q6PL45 260 aa8.59□□□□□ -1.03
PCM1-217ENST00000522998 MSS51Q4VC12 460 aa8.58□□□□□ -1.04
PCM1-217ENST00000522998 SMYD5Q6GMV2 418 aa8.58□□□□□ -1.04
PCM1-217ENST00000522998 TESPA1A2RU30 521 aaPredicted RBP8.57□□□□□ -1.04
PCM1-217ENST00000522998 WNT7AO00755 349 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms