RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 C14orf93Q9H972 538 aaKnown RBP13.39□□□□□ -0.27
SPARC-205ENST00000522348 TMF1P82094 1093 aa13.38□□□□□ -0.27
SPARC-205ENST00000522348 MADDQ8WXG6 1647 aa13.38□□□□□ -0.27
SPARC-205ENST00000522348 NRXN1Q9ULB1 1477 aa13.37□□□□□ -0.27
SPARC-205ENST00000522348 ZMYM3Q14202 1370 aa13.37□□□□□ -0.27
SPARC-205ENST00000522348 POLR3GLQ9BT43 218 aa13.37□□□□□ -0.27
SPARC-205ENST00000522348 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
SPARC-205ENST00000522348 SCAF11Q99590 1463 aaKnown RBP13.36□□□□□ -0.27
SPARC-205ENST00000522348 EIF3AQ14152 1382 aaKnown RBP13.36□□□□□ -0.27
SPARC-205ENST00000522348 CDCA8Q53HL2 280 aa13.36□□□□□ -0.27
SPARC-205ENST00000522348 TESK2Q96S53 571 aa13.36□□□□□ -0.27
SPARC-205ENST00000522348 ZFYVE9O95405 1425 aa13.36□□□□□ -0.27
SPARC-205ENST00000522348 SYNMO15061 1565 aa13.36□□□□□ -0.27
SPARC-205ENST00000522348 ERVK-7P63135 1459 aa13.36□□□□□ -0.27
SPARC-205ENST00000522348 PIK3C2BO00750 1634 aa13.35□□□□□ -0.27
SPARC-205ENST00000522348 PLPPR3Q6T4P5 718 aa13.35□□□□□ -0.27
SPARC-205ENST00000522348 YTHDC1Q96MU7 727 aaKnown RBP13.35□□□□□ -0.27
SPARC-205ENST00000522348 KIAA1210Q9ULL0 1709 aa13.35□□□□□ -0.27
SPARC-205ENST00000522348 SIGLEC1Q9BZZ2 1709 aa13.34□□□□□ -0.27
SPARC-205ENST00000522348 HDGFP51858 240 aaKnown RBP13.33□□□□□ -0.28
SPARC-205ENST00000522348 PREX1Q8TCU6 1659 aa13.33□□□□□ -0.28
SPARC-205ENST00000522348 POLR1AO95602 1720 aaPredicted RBP13.33□□□□□ -0.28
SPARC-205ENST00000522348 CFAP65Q6ZU64 1925 aaKnown RBP13.33□□□□□ -0.28
SPARC-205ENST00000522348 PRKRIP1Q9H875 184 aaPredicted RBP13.32□□□□□ -0.28
SPARC-205ENST00000522348 PIK3C2GO75747 1445 aa13.31□□□□□ -0.28
SPARC-205ENST00000522348 CLTCQ00610 1675 aaKnown RBP13.31□□□□□ -0.28
SPARC-205ENST00000522348 MROH2AA6NES4 1674 aa13.31□□□□□ -0.28
SPARC-205ENST00000522348 IFT172Q9UG01 1749 aa13.3□□□□□ -0.28
SPARC-205ENST00000522348 SPATA31D1Q6ZQQ2 1576 aa13.3□□□□□ -0.28
SPARC-205ENST00000522348 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.3□□□□□ -0.28
SPARC-205ENST00000522348 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
SPARC-205ENST00000522348 PPLO60437 1756 aa13.28□□□□□ -0.28
SPARC-205ENST00000522348 NUTM2DQ5VT03 806 aaPredicted RBP13.28□□□□□ -0.28
SPARC-205ENST00000522348 NEXMIFQ5QGS0 1516 aa13.28□□□□□ -0.28
SPARC-205ENST00000522348 TMEM131LA2VDJ0 1609 aa13.28□□□□□ -0.28
SPARC-205ENST00000522348 TNRQ92752 1358 aa13.27□□□□□ -0.29
SPARC-205ENST00000522348 DISP3Q9P2K9 1392 aa13.27□□□□□ -0.29
SPARC-205ENST00000522348 IQGAP1P46940 1657 aa13.26□□□□□ -0.29
SPARC-205ENST00000522348 ADAMTSL3P82987 1691 aa13.26□□□□□ -0.29
SPARC-205ENST00000522348 RALBP1Q15311 655 aa13.26□□□□□ -0.29
SPARC-205ENST00000522348 TMEM132EQ6IEE7 984 aa13.26□□□□□ -0.29
SPARC-205ENST00000522348 KTN1Q86UP2 1357 aaKnown RBP13.26□□□□□ -0.29
SPARC-205ENST00000522348 CENPJQ9HC77 1338 aaPredicted RBP13.26□□□□□ -0.29
SPARC-205ENST00000522348 TRAK1Q9UPV9 953 aa13.26□□□□□ -0.29
SPARC-205ENST00000522348 PTPRMP28827 1452 aa13.25□□□□□ -0.29
SPARC-205ENST00000522348 RIMS1Q86UR5 1692 aaKnown RBP13.24□□□□□ -0.29
SPARC-205ENST00000522348 A2ML1A8K2U0 1454 aa13.24□□□□□ -0.29
SPARC-205ENST00000522348 SBNO2Q9Y2G9 1366 aa13.24□□□□□ -0.29
SPARC-205ENST00000522348 PER1O15534 1290 aaPredicted RBP13.24□□□□□ -0.29
SPARC-205ENST00000522348 PUS7Q96PZ0 661 aaKnown RBP13.24□□□□□ -0.29
SPARC-205ENST00000522348 PANK3Q9H999 370 aa13.24□□□□□ -0.29
SPARC-205ENST00000522348 RIMS2Q9UQ26 1411 aa13.23□□□□□ -0.29
SPARC-205ENST00000522348 FER1L4A9Z1Z3 1794 aa13.22□□□□□ -0.29
SPARC-205ENST00000522348 CEBPAP49715 358 aaPredicted RBP13.22□□□□□ -0.29
SPARC-205ENST00000522348 ADGRB1O14514 1584 aa13.22□□□□□ -0.29
SPARC-205ENST00000522348 KNSTRNQ9Y448 316 aa13.2□□□□□ -0.3
SPARC-205ENST00000522348 NLRP1Q9C000 1473 aa13.19□□□□□ -0.3
SPARC-205ENST00000522348 MRS2Q9HD23 443 aa13.19□□□□□ -0.3
SPARC-205ENST00000522348 THEMISQ8N1K5 641 aaPredicted RBP13.18□□□□□ -0.3
SPARC-205ENST00000522348 STK26Q9P289 416 aa13.18□□□□□ -0.3
SPARC-205ENST00000522348 TMEM2Q9UHN6 1383 aa13.18□□□□□ -0.3
SPARC-205ENST00000522348 EVC2Q86UK5 1308 aa13.17□□□□□ -0.3
SPARC-205ENST00000522348 POGKQ9P215 609 aa13.17□□□□□ -0.3
SPARC-205ENST00000522348 EID1Q9Y6B2 187 aa13.17□□□□□ -0.3
SPARC-205ENST00000522348 MYO3AQ8NEV4 1616 aa13.17□□□□□ -0.3
SPARC-205ENST00000522348 MYBBP1AQ9BQG0 1328 aaKnown RBP13.16□□□□□ -0.3
SPARC-205ENST00000522348 YTHDC2Q9H6S0 1430 aaKnown RBP13.16□□□□□ -0.3
SPARC-205ENST00000522348 TMC1Q8TDI8 760 aa13.16□□□□□ -0.3
SPARC-205ENST00000522348 SIRT1Q96EB6 747 aa13.16□□□□□ -0.3
SPARC-205ENST00000522348 KDM5AP29375 1690 aaKnown RBP13.15□□□□□ -0.3
SPARC-205ENST00000522348 ALKQ9UM73 1620 aa13.15□□□□□ -0.3
SPARC-205ENST00000522348 CNGB1Q14028 1251 aaPredicted RBP13.15□□□□□ -0.3
SPARC-205ENST00000522348 CCDC184Q52MB2 194 aa13.15□□□□□ -0.3
SPARC-205ENST00000522348 BCANQ96GW7 911 aa13.15□□□□□ -0.3
SPARC-205ENST00000522348 MYO5BQ9ULV0 1848 aa13.14□□□□□ -0.31
SPARC-205ENST00000522348 TXNDC2Q86VQ3 553 aa13.14□□□□□ -0.31
SPARC-205ENST00000522348 LRPPRCP42704 1394 aaKnown RBP13.14□□□□□ -0.31
SPARC-205ENST00000522348 ABCC11Q96J66 1382 aa13.14□□□□□ -0.31
SPARC-205ENST00000522348 BRD4O60885 1362 aaPredicted RBP13.13□□□□□ -0.31
SPARC-205ENST00000522348 PARD3Q8TEW0 1356 aa13.13□□□□□ -0.31
SPARC-205ENST00000522348 PRAM1Q96QH2 718 aa13.13□□□□□ -0.31
SPARC-205ENST00000522348 NPC1L1Q9UHC9 1359 aa13.12□□□□□ -0.31
SPARC-205ENST00000522348 CC2D1BQ5T0F9 858 aaKnown RBP13.12□□□□□ -0.31
SPARC-205ENST00000522348 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
SPARC-205ENST00000522348 FAM9BQ8IZU0 186 aa13.12□□□□□ -0.31
SPARC-205ENST00000522348 SENP3Q9H4L4 574 aaPredicted RBP13.12□□□□□ -0.31
SPARC-205ENST00000522348 AMER1Q5JTC6 1135 aaPredicted RBP13.11□□□□□ -0.31
SPARC-205ENST00000522348 PNISRQ8TF01 805 aaKnown RBP13.11□□□□□ -0.31
SPARC-205ENST00000522348 PLEKHG1Q9ULL1 1385 aa13.1□□□□□ -0.31
SPARC-205ENST00000522348 C3P01024 1663 aa13.1□□□□□ -0.31
SPARC-205ENST00000522348 LTKP29376 864 aa13.1□□□□□ -0.31
SPARC-205ENST00000522348 ASXL1Q8IXJ9 1541 aa13.09□□□□□ -0.31
SPARC-205ENST00000522348 DLC1Q96QB1 1528 aa13.09□□□□□ -0.31
SPARC-205ENST00000522348 HNRNPUQ00839 825 aaKnown RBP eCLIP13.09□□□□□ -0.31
SPARC-205ENST00000522348 SAFB2Q14151 953 aaKnown RBP eCLIP13.09□□□□□ -0.31
SPARC-205ENST00000522348 SLC12A5Q9H2X9 1139 aa13.09□□□□□ -0.31
SPARC-205ENST00000522348 TBX22Q9Y458 520 aa13.09□□□□□ -0.31
SPARC-205ENST00000522348 UBR1Q8IWV7 1749 aa13.08□□□□□ -0.32
SPARC-205ENST00000522348 SRPK2P78362 688 aaKnown RBP13.08□□□□□ -0.32
SPARC-205ENST00000522348 CARD14Q9BXL6 1004 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms