RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 PLCH2O75038 1416 aa9.58□□□□□ -0.88
SPIDR-216ENST00000521918 OXER1Q8TDS5 423 aa9.58□□□□□ -0.88
SPIDR-216ENST00000521918 RICTORQ6R327 1708 aa9.58□□□□□ -0.88
SPIDR-216ENST00000521918 AKNAQ7Z591 1439 aa9.57□□□□□ -0.88
SPIDR-216ENST00000521918 MYO5CQ9NQX4 1742 aa9.57□□□□□ -0.88
SPIDR-216ENST00000521918 HOXB3P14651 431 aaPredicted RBP9.57□□□□□ -0.88
SPIDR-216ENST00000521918 DOK7Q18PE1 504 aa9.57□□□□□ -0.88
SPIDR-216ENST00000521918 PTCD2Q8WV60 388 aaKnown RBP9.57□□□□□ -0.88
SPIDR-216ENST00000521918 BCANQ96GW7 911 aa9.57□□□□□ -0.88
SPIDR-216ENST00000521918 ZMYM4Q5VZL5 1548 aa9.56□□□□□ -0.88
SPIDR-216ENST00000521918 KDM4FA0A1W2PPD8 638 aa9.56□□□□□ -0.88
SPIDR-216ENST00000521918 DPYSL4O14531 572 aa9.56□□□□□ -0.88
SPIDR-216ENST00000521918 PREX2Q70Z35 1606 aa9.56□□□□□ -0.88
SPIDR-216ENST00000521918 ARHGEF40Q8TER5 1519 aa9.56□□□□□ -0.88
SPIDR-216ENST00000521918 DENND4BO75064 1496 aaPredicted RBP9.55□□□□□ -0.88
SPIDR-216ENST00000521918 ADGRL1O94910 1474 aa9.55□□□□□ -0.88
SPIDR-216ENST00000521918 ATP1B4Q9UN42 357 aaPredicted RBP9.55□□□□□ -0.88
SPIDR-216ENST00000521918 CDK11AQ9UQ88 783 aaPredicted RBP9.55□□□□□ -0.88
SPIDR-216ENST00000521918 CDC42BPBQ9Y5S2 1711 aa9.54□□□□□ -0.88
SPIDR-216ENST00000521918 RAPGEF3O95398 923 aa9.54□□□□□ -0.88
SPIDR-216ENST00000521918 UPF1Q92900 1129 aaKnown RBP eCLIP9.54□□□□□ -0.88
SPIDR-216ENST00000521918 POGZQ7Z3K3 1410 aa9.54□□□□□ -0.88
SPIDR-216ENST00000521918 LOC105371045A0A1W2PR82 267 aa9.52□□□□□ -0.89
SPIDR-216ENST00000521918 RIMBP2O15034 1052 aa9.52□□□□□ -0.89
SPIDR-216ENST00000521918 KDM5CP41229 1560 aa9.52□□□□□ -0.89
SPIDR-216ENST00000521918 NBR1Q14596 966 aa9.52□□□□□ -0.89
SPIDR-216ENST00000521918 PDIA6Q15084 440 aa9.52□□□□□ -0.89
SPIDR-216ENST00000521918 CDC42BPAQ5VT25 1732 aa9.52□□□□□ -0.89
SPIDR-216ENST00000521918 ABCC1P33527 1531 aa9.51□□□□□ -0.89
SPIDR-216ENST00000521918 ARHGAP5Q13017 1502 aa9.51□□□□□ -0.89
SPIDR-216ENST00000521918 EHBP1L1Q8N3D4 1523 aa9.51□□□□□ -0.89
SPIDR-216ENST00000521918 VPS8Q8N3P4 1428 aa9.51□□□□□ -0.89
SPIDR-216ENST00000521918 SCAPERQ9BY12 1400 aa9.51□□□□□ -0.89
SPIDR-216ENST00000521918 ZNF710Q8N1W2 664 aa9.51□□□□□ -0.89
SPIDR-216ENST00000521918 SIGLEC1Q9BZZ2 1709 aa9.51□□□□□ -0.89
SPIDR-216ENST00000521918 YEATS2Q9ULM3 1422 aa9.5□□□□□ -0.89
SPIDR-216ENST00000521918 SEMA3EO15041 775 aa9.5□□□□□ -0.89
SPIDR-216ENST00000521918 MAP3K9P80192 1104 aa9.5□□□□□ -0.89
SPIDR-216ENST00000521918 ZSWIM6Q9HCJ5 1215 aa9.5□□□□□ -0.89
SPIDR-216ENST00000521918 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
SPIDR-216ENST00000521918 MAGI2Q86UL8 1455 aa9.5□□□□□ -0.89
SPIDR-216ENST00000521918 ARHGEF12Q9NZN5 1544 aa9.5□□□□□ -0.89
SPIDR-216ENST00000521918 GPATCH8Q9UKJ3 1502 aaKnown RBP9.5□□□□□ -0.89
SPIDR-216ENST00000521918 ZNF518AQ6AHZ1 1483 aa9.49□□□□□ -0.89
SPIDR-216ENST00000521918 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
SPIDR-216ENST00000521918 ZFYVE16Q7Z3T8 1539 aa9.49□□□□□ -0.89
SPIDR-216ENST00000521918 TIAM1Q13009 1591 aa9.49□□□□□ -0.89
SPIDR-216ENST00000521918 ADAMTSL3P82987 1691 aa9.48□□□□□ -0.89
SPIDR-216ENST00000521918 ITSN2Q9NZM3 1697 aa9.48□□□□□ -0.89
SPIDR-216ENST00000521918 SPDYE16A6NNV3 312 aaPredicted RBP9.48□□□□□ -0.89
SPIDR-216ENST00000521918 ST18O60284 1047 aa9.48□□□□□ -0.89
SPIDR-216ENST00000521918 EFCAB2Q5VUJ9 269 aa9.48□□□□□ -0.89
SPIDR-216ENST00000521918 GPR153Q6NV75 609 aa9.48□□□□□ -0.89
SPIDR-216ENST00000521918 SAMD9LQ8IVG5 1584 aa9.48□□□□□ -0.89
SPIDR-216ENST00000521918 BCORL1Q5H9F3 1711 aa9.48□□□□□ -0.89
SPIDR-216ENST00000521918 TESPA1A2RU30 521 aaPredicted RBP9.47□□□□□ -0.89
SPIDR-216ENST00000521918 MTUS2Q5JR59 1369 aa9.47□□□□□ -0.89
SPIDR-216ENST00000521918 HECW2Q9P2P5 1572 aa9.46□□□□□ -0.89
SPIDR-216ENST00000521918 TBC1D12O60347 775 aa9.46□□□□□ -0.9
SPIDR-216ENST00000521918 EVI5O60447 810 aa9.46□□□□□ -0.9
SPIDR-216ENST00000521918 TRAPPC8Q9Y2L5 1435 aa9.46□□□□□ -0.9
SPIDR-216ENST00000521918 MAP3K1Q13233 1512 aa9.46□□□□□ -0.9
SPIDR-216ENST00000521918 DIP2CQ9Y2E4 1556 aa9.46□□□□□ -0.9
SPIDR-216ENST00000521918 ARSIQ5FYB1 569 aa9.45□□□□□ -0.9
SPIDR-216ENST00000521918 LCE2DQ5TA82 110 aaPredicted RBP9.45□□□□□ -0.9
SPIDR-216ENST00000521918 KHSRPQ92945 711 aaKnown RBP eCLIP9.45□□□□□ -0.9
SPIDR-216ENST00000521918 ANO8Q9HCE9 1232 aaPredicted RBP9.45□□□□□ -0.9
SPIDR-216ENST00000521918 MLH3Q9UHC1 1453 aa9.45□□□□□ -0.9
SPIDR-216ENST00000521918 SYCP2Q9BX26 1530 aa9.45□□□□□ -0.9
SPIDR-216ENST00000521918 REREQ9P2R6 1566 aa9.45□□□□□ -0.9
SPIDR-216ENST00000521918 ABCA6Q8N139 1617 aa9.45□□□□□ -0.9
SPIDR-216ENST00000521918 HOXB1P14653 301 aaPredicted RBP9.44□□□□□ -0.9
SPIDR-216ENST00000521918 MLLT3P42568 568 aaPredicted RBP9.44□□□□□ -0.9
SPIDR-216ENST00000521918 NCOA2Q15596 1464 aa9.44□□□□□ -0.9
SPIDR-216ENST00000521918 MADDQ8WXG6 1647 aa9.44□□□□□ -0.9
SPIDR-216ENST00000521918 KIDINS220Q9ULH0 1771 aa9.43□□□□□ -0.9
SPIDR-216ENST00000521918 SUPT6HQ7KZ85 1726 aaKnown RBP9.43□□□□□ -0.9
SPIDR-216ENST00000521918 ATP10AO60312 1499 aa9.43□□□□□ -0.9
SPIDR-216ENST00000521918 LRRC9Q6ZRR7 1453 aa9.43□□□□□ -0.9
SPIDR-216ENST00000521918 C9orf84Q5VXU9 1444 aa9.43□□□□□ -0.9
SPIDR-216ENST00000521918 KIAA1107Q9UPP5 1409 aa9.43□□□□□ -0.9
SPIDR-216ENST00000521918 CCNB3Q8WWL7 1395 aa9.43□□□□□ -0.9
SPIDR-216ENST00000521918 INO80Q9ULG1 1556 aaPredicted RBP9.42□□□□□ -0.9
SPIDR-216ENST00000521918 PTGER2P43116 358 aa9.42□□□□□ -0.9
SPIDR-216ENST00000521918 AFAP1Q8N556 730 aa9.42□□□□□ -0.9
SPIDR-216ENST00000521918 PTPRMP28827 1452 aa9.41□□□□□ -0.9
SPIDR-216ENST00000521918 PLEKHH2Q8IVE3 1493 aa9.41□□□□□ -0.9
SPIDR-216ENST00000521918 MBD5Q9P267 1494 aa9.41□□□□□ -0.9
SPIDR-216ENST00000521918 NUDT7P0C024 238 aa9.41□□□□□ -0.9
SPIDR-216ENST00000521918 AGLP35573 1532 aa9.4□□□□□ -0.91
SPIDR-216ENST00000521918 PLXNC1O60486 1568 aa9.39□□□□□ -0.91
SPIDR-216ENST00000521918 CFDP1Q9UEE9 299 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-216ENST00000521918 ATP7AQ04656 1500 aa9.39□□□□□ -0.91
SPIDR-216ENST00000521918 RIMS1Q86UR5 1692 aaKnown RBP9.39□□□□□ -0.91
SPIDR-216ENST00000521918 EMP3P54852 163 aa9.38□□□□□ -0.91
SPIDR-216ENST00000521918 KANK4Q5T7N3 995 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-216ENST00000521918 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
SPIDR-216ENST00000521918 MARVELD3Q96A59 401 aa9.38□□□□□ -0.91
SPIDR-216ENST00000521918 CAMSAP2Q08AD1 1489 aa9.38□□□□□ -0.91
SPIDR-216ENST00000521918 FER1L4A9Z1Z3 1794 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms