RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 CDC42BPAQ5VT25 1732 aa12.34□□□□□ -0.43
CTNNA1-230ENST00000521724 INSRP06213 1382 aa12.34□□□□□ -0.43
CTNNA1-230ENST00000521724 NBPF1Q3BBV0 1214 aa12.34□□□□□ -0.43
CTNNA1-230ENST00000521724 PANK2Q9BZ23 570 aa12.34□□□□□ -0.43
CTNNA1-230ENST00000521724 ADCY10Q96PN6 1610 aa12.34□□□□□ -0.43
CTNNA1-230ENST00000521724 VIRMAQ69YN4 1812 aaKnown RBP12.33□□□□□ -0.44
CTNNA1-230ENST00000521724 PER1O15534 1290 aaPredicted RBP12.33□□□□□ -0.44
CTNNA1-230ENST00000521724 RGL3Q3MIN7 710 aa12.33□□□□□ -0.44
CTNNA1-230ENST00000521724 MAGI1Q96QZ7 1491 aaPredicted RBP12.33□□□□□ -0.44
CTNNA1-230ENST00000521724 TSPY4P0CV99 314 aa12.32□□□□□ -0.44
CTNNA1-230ENST00000521724 TSPY10P0CW01 314 aa12.32□□□□□ -0.44
CTNNA1-230ENST00000521724 DUSP27Q5VZP5 1158 aa12.32□□□□□ -0.44
CTNNA1-230ENST00000521724 GZF1Q9H116 711 aaPredicted RBP12.32□□□□□ -0.44
CTNNA1-230ENST00000521724 SEC24BO95487 1268 aa12.32□□□□□ -0.44
CTNNA1-230ENST00000521724 FSD2A1L4K1 749 aa12.31□□□□□ -0.44
CTNNA1-230ENST00000521724 ANTXR1Q9H6X2 564 aa12.31□□□□□ -0.44
CTNNA1-230ENST00000521724 ADAMTS8Q9UP79 889 aa12.31□□□□□ -0.44
CTNNA1-230ENST00000521724 CARMIL2Q6F5E8 1435 aa12.3□□□□□ -0.44
CTNNA1-230ENST00000521724 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
CTNNA1-230ENST00000521724 NUP160Q12769 1436 aa12.29□□□□□ -0.44
CTNNA1-230ENST00000521724 ABCA8O94911 1581 aa12.29□□□□□ -0.44
CTNNA1-230ENST00000521724 UPF2Q9HAU5 1272 aaKnown RBP12.29□□□□□ -0.44
CTNNA1-230ENST00000521724 ARHGEF12Q9NZN5 1544 aa12.28□□□□□ -0.44
CTNNA1-230ENST00000521724 PTPRGP23470 1445 aa12.28□□□□□ -0.44
CTNNA1-230ENST00000521724 MRE11P49959 708 aa12.28□□□□□ -0.44
CTNNA1-230ENST00000521724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.28□□□□□ -0.442e-7■■□□□ 13.3
CTNNA1-230ENST00000521724 MYH16Q9H6N6 1097 aa12.28□□□□□ -0.44
CTNNA1-230ENST00000521724 PLEKHH1Q9ULM0 1364 aa12.27□□□□□ -0.44
CTNNA1-230ENST00000521724 MAPK8IP3Q9UPT6 1336 aa12.27□□□□□ -0.44
CTNNA1-230ENST00000521724 IGHDP01880 384 aa12.27□□□□□ -0.44
CTNNA1-230ENST00000521724 MCM4P33991 863 aa12.27□□□□□ -0.44
CTNNA1-230ENST00000521724 ESPNB1AK53 854 aa12.27□□□□□ -0.45
CTNNA1-230ENST00000521724 EIF3AQ14152 1382 aaKnown RBP12.27□□□□□ -0.45
CTNNA1-230ENST00000521724 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
CTNNA1-230ENST00000521724 WDR43Q15061 677 aaKnown RBP eCLIP12.26□□□□□ -0.45
CTNNA1-230ENST00000521724 SHANK2Q9UPX8 1470 aa12.26□□□□□ -0.45
CTNNA1-230ENST00000521724 SPRYD3Q8NCJ5 442 aa12.26□□□□□ -0.45
CTNNA1-230ENST00000521724 TBC1D2Q9BYX2 928 aa12.26□□□□□ -0.45
CTNNA1-230ENST00000521724 PANK3Q9H999 370 aa12.25□□□□□ -0.45
CTNNA1-230ENST00000521724 KDM5DQ9BY66 1539 aa12.25□□□□□ -0.45
CTNNA1-230ENST00000521724 PLA2R1Q13018 1463 aa12.25□□□□□ -0.45
CTNNA1-230ENST00000521724 TRAK2O60296 914 aa12.24□□□□□ -0.45
CTNNA1-230ENST00000521724 TRIM44Q96DX7 344 aaPredicted RBP12.24□□□□□ -0.45
CTNNA1-230ENST00000521724 FAM135AQ9P2D6 1515 aa12.24□□□□□ -0.45
CTNNA1-230ENST00000521724 PRAG1Q86YV5 1406 aa12.24□□□□□ -0.45
CTNNA1-230ENST00000521724 TESK2Q96S53 571 aa12.24□□□□□ -0.45
CTNNA1-230ENST00000521724 GRPEL1Q9HAV7 217 aa12.24□□□□□ -0.45
CTNNA1-230ENST00000521724 DISP3Q9P2K9 1392 aa12.23□□□□□ -0.45
CTNNA1-230ENST00000521724 NLRP1Q9C000 1473 aa12.23□□□□□ -0.45
CTNNA1-230ENST00000521724 ZNF521Q96K83 1311 aa12.23□□□□□ -0.45
CTNNA1-230ENST00000521724 BCAR3O75815 825 aa12.23□□□□□ -0.45
CTNNA1-230ENST00000521724 SLFN5Q08AF3 891 aa12.23□□□□□ -0.45
CTNNA1-230ENST00000521724 TBC1D32Q96NH3 1257 aa12.23□□□□□ -0.45
CTNNA1-230ENST00000521724 PDCL3Q9H2J4 239 aa12.23□□□□□ -0.45
CTNNA1-230ENST00000521724 SAMD9LQ8IVG5 1584 aa12.22□□□□□ -0.45
CTNNA1-230ENST00000521724 ERBB4Q15303 1308 aa12.22□□□□□ -0.45
CTNNA1-230ENST00000521724 TPM2P07951 284 aa12.21□□□□□ -0.45
CTNNA1-230ENST00000521724 CDC42BPBQ9Y5S2 1711 aa12.21□□□□□ -0.45
CTNNA1-230ENST00000521724 CGNL1Q0VF96 1302 aa12.21□□□□□ -0.45
CTNNA1-230ENST00000521724 CCDC144AA2RUR9 1427 aa12.21□□□□□ -0.46
CTNNA1-230ENST00000521724 CLUAP1Q96AJ1 413 aa12.21□□□□□ -0.46
CTNNA1-230ENST00000521724 TRPM1Q7Z4N2 1603 aa12.2□□□□□ -0.46
CTNNA1-230ENST00000521724 CHMP5Q9NZZ3 219 aa12.2□□□□□ -0.46
CTNNA1-230ENST00000521724 A2MP01023 1474 aa12.2□□□□□ -0.46
CTNNA1-230ENST00000521724 CCDC141Q6ZP82 1450 aa12.19□□□□□ -0.46
CTNNA1-230ENST00000521724 ISY1Q9ULR0 285 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-230ENST00000521724 ARHGEF5Q12774 1597 aa12.19□□□□□ -0.46
CTNNA1-230ENST00000521724 NKTRP30414 1462 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-230ENST00000521724 CANXP27824 592 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-230ENST00000521724 BBXQ8WY36 941 aaPredicted RBP12.19□□□□□ -0.46
CTNNA1-230ENST00000521724 COL17A1Q9UMD9 1497 aaPredicted RBP12.19□□□□□ -0.46
CTNNA1-230ENST00000521724 DDX11L8A8MPP1 907 aa12.18□□□□□ -0.46
CTNNA1-230ENST00000521724 COG6Q9Y2V7 657 aa12.18□□□□□ -0.46
CTNNA1-230ENST00000521724 PPP2R1AP30153 589 aa12.17□□□□□ -0.46
CTNNA1-230ENST00000521724 PDE3AQ14432 1141 aa12.17□□□□□ -0.46
CTNNA1-230ENST00000521724 TRMT2AQ8IZ69 625 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-230ENST00000521724 SPINK5Q9NQ38 1064 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-230ENST00000521724 CENPJQ9HC77 1338 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-230ENST00000521724 ERCC6L2Q5T890 1561 aa12.17□□□□□ -0.46
CTNNA1-230ENST00000521724 SYCP2Q9BX26 1530 aa12.17□□□□□ -0.46
CTNNA1-230ENST00000521724 TMF1P82094 1093 aa12.17□□□□□ -0.46
CTNNA1-230ENST00000521724 CCDC146Q8IYE0 955 aa12.17□□□□□ -0.46
CTNNA1-230ENST00000521724 GPRASP1Q5JY77 1395 aa12.16□□□□□ -0.46
CTNNA1-230ENST00000521724 KIAA1211Q6ZU35 1233 aa12.16□□□□□ -0.46
CTNNA1-230ENST00000521724 PANK1Q8TE04 598 aa12.16□□□□□ -0.46
CTNNA1-230ENST00000521724 KNSTRNQ9Y448 316 aa12.16□□□□□ -0.46
CTNNA1-230ENST00000521724 CHD1O14646 1710 aa12.15□□□□□ -0.46
CTNNA1-230ENST00000521724 E9PSI1 815 aa12.15□□□□□ -0.47
CTNNA1-230ENST00000521724 APAF1O14727 1248 aa12.15□□□□□ -0.47
CTNNA1-230ENST00000521724 TRHP20396 242 aaPredicted RBP12.15□□□□□ -0.47
CTNNA1-230ENST00000521724 PMFBP1Q8TBY8 1022 aa12.14□□□□□ -0.47
CTNNA1-230ENST00000521724 ERBINQ96RT1 1412 aa12.14□□□□□ -0.47
CTNNA1-230ENST00000521724 CALD1Q05682 793 aaKnown RBP12.14□□□□□ -0.47
CTNNA1-230ENST00000521724 ARID3AQ99856 593 aa12.14□□□□□ -0.47
CTNNA1-230ENST00000521724 PREX2Q70Z35 1606 aa12.14□□□□□ -0.47
CTNNA1-230ENST00000521724 TTC37Q6PGP7 1564 aa12.14□□□□□ -0.47
CTNNA1-230ENST00000521724 CLASP1Q7Z460 1538 aa12.13□□□□□ -0.47
CTNNA1-230ENST00000521724 RSPH4AQ5TD94 716 aa12.13□□□□□ -0.47
CTNNA1-230ENST00000521724 C22orf23Q9BZE7 217 aa12.12□□□□□ -0.47
CTNNA1-230ENST00000521724 PDZRN3Q9UPQ7 1066 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms