RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 POTEDQ86YR6 584 aa12.92□□□□□ -0.34
CSMD1-209ENST00000520630 LMTK2Q8IWU2 1503 aa12.92□□□□□ -0.34
CSMD1-209ENST00000520630 TMEM131LA2VDJ0 1609 aa12.91□□□□□ -0.34
CSMD1-209ENST00000520630 MSH6P52701 1360 aa12.91□□□□□ -0.34
CSMD1-209ENST00000520630 ZFYVE9O95405 1425 aa12.9□□□□□ -0.34
CSMD1-209ENST00000520630 NOS1P29475 1434 aa12.9□□□□□ -0.34
CSMD1-209ENST00000520630 SPATA31A6Q5VVP1 1343 aa12.89□□□□□ -0.35
CSMD1-209ENST00000520630 RGS12O14924 1447 aa12.88□□□□□ -0.35
CSMD1-209ENST00000520630 ZNF772Q68DY9 489 aaPredicted RBP12.88□□□□□ -0.35
CSMD1-209ENST00000520630 ERBINQ96RT1 1412 aa12.88□□□□□ -0.35
CSMD1-209ENST00000520630 SETBP1Q9Y6X0 1596 aa12.86□□□□□ -0.35
CSMD1-209ENST00000520630 RXRBP28702 533 aa12.86□□□□□ -0.35
CSMD1-209ENST00000520630 PTPN23Q9H3S7 1636 aa12.85□□□□□ -0.35
CSMD1-209ENST00000520630 KIF15Q9NS87 1388 aa12.85□□□□□ -0.35
CSMD1-209ENST00000520630 ABCC5O15440 1437 aa12.85□□□□□ -0.35
CSMD1-209ENST00000520630 NCOA3Q9Y6Q9 1424 aa12.84□□□□□ -0.35
CSMD1-209ENST00000520630 MARF1Q9Y4F3 1742 aaKnown RBP12.84□□□□□ -0.35
CSMD1-209ENST00000520630 NRXN3Q9Y4C0 1643 aa12.84□□□□□ -0.35
CSMD1-209ENST00000520630 PLEKHG1Q9ULL1 1385 aa12.83□□□□□ -0.36
CSMD1-209ENST00000520630 XRN1Q8IZH2 1706 aaKnown RBP12.83□□□□□ -0.36
CSMD1-209ENST00000520630 MYOM3Q5VTT5 1437 aa12.83□□□□□ -0.36
CSMD1-209ENST00000520630 ADAMTS13Q76LX8 1427 aa12.83□□□□□ -0.36
CSMD1-209ENST00000520630 MEX3CQ5U5Q3 659 aaKnown RBP12.83□□□□□ -0.36
CSMD1-209ENST00000520630 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.83□□□□□ -0.36
CSMD1-209ENST00000520630 AFF2P51816 1311 aa12.83□□□□□ -0.36
CSMD1-209ENST00000520630 BRWD3Q6RI45 1802 aa12.83□□□□□ -0.36
CSMD1-209ENST00000520630 KANK4Q5T7N3 995 aaPredicted RBP12.82□□□□□ -0.36
CSMD1-209ENST00000520630 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
CSMD1-209ENST00000520630 E9PCH4 1651 aa12.82□□□□□ -0.36
CSMD1-209ENST00000520630 ASXL1Q8IXJ9 1541 aa12.82□□□□□ -0.36
CSMD1-209ENST00000520630 NALCNQ8IZF0 1738 aa12.82□□□□□ -0.36
CSMD1-209ENST00000520630 PTPRUQ92729 1446 aa12.81□□□□□ -0.36
CSMD1-209ENST00000520630 BRINP3Q76B58 766 aa12.81□□□□□ -0.36
CSMD1-209ENST00000520630 RRP7BPQ9NSQ0 103 aa12.81□□□□□ -0.36
CSMD1-209ENST00000520630 UNC13BO14795 1591 aa12.81□□□□□ -0.36
CSMD1-209ENST00000520630 LAMC1P11047 1609 aa12.8□□□□□ -0.36
CSMD1-209ENST00000520630 SETD5Q9C0A6 1442 aa12.8□□□□□ -0.36
CSMD1-209ENST00000520630 RIMS2Q9UQ26 1411 aa12.8□□□□□ -0.36
CSMD1-209ENST00000520630 NUTM2BA6NNL0 878 aaPredicted RBP12.8□□□□□ -0.36
CSMD1-209ENST00000520630 NUTM2EB1AL46 878 aaPredicted RBP12.8□□□□□ -0.36
CSMD1-209ENST00000520630 NUTM2AQ8IVF1 878 aaPredicted RBP12.8□□□□□ -0.36
CSMD1-209ENST00000520630 DAPK1P53355 1430 aa12.79□□□□□ -0.36
CSMD1-209ENST00000520630 TBX22Q9Y458 520 aa12.78□□□□□ -0.36
CSMD1-209ENST00000520630 C19orf44Q9H6X5 657 aa12.77□□□□□ -0.37
CSMD1-209ENST00000520630 MST1RQ04912 1400 aa12.77□□□□□ -0.37
CSMD1-209ENST00000520630 QTRT2Q9H974 415 aaKnown RBP12.76□□□□□ -0.37
CSMD1-209ENST00000520630 KANK1Q14678 1352 aa12.76□□□□□ -0.37
CSMD1-209ENST00000520630 TRPM2O94759 1503 aa12.76□□□□□ -0.37
CSMD1-209ENST00000520630 RBM6P78332 1123 aaKnown RBP12.75□□□□□ -0.37
CSMD1-209ENST00000520630 RPRD2Q5VT52 1461 aaKnown RBP12.75□□□□□ -0.37
CSMD1-209ENST00000520630 CADPS2Q86UW7 1296 aa12.75□□□□□ -0.37
CSMD1-209ENST00000520630 SLC52A1Q9NWF4 448 aa12.75□□□□□ -0.37
CSMD1-209ENST00000520630 PNPLA6Q8IY17 1366 aa12.74□□□□□ -0.37
CSMD1-209ENST00000520630 DDX17Q92841 729 aaKnown RBP12.74□□□□□ -0.37
CSMD1-209ENST00000520630 BCANQ96GW7 911 aa12.74□□□□□ -0.37
CSMD1-209ENST00000520630 COL22A1Q8NFW1 1626 aaPredicted RBP12.73□□□□□ -0.37
CSMD1-209ENST00000520630 NUTM2DQ5VT03 806 aaPredicted RBP12.73□□□□□ -0.37
CSMD1-209ENST00000520630 DCCP43146 1447 aa12.72□□□□□ -0.37
CSMD1-209ENST00000520630 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
CSMD1-209ENST00000520630 PIK3R4Q99570 1358 aa12.72□□□□□ -0.37
CSMD1-209ENST00000520630 ATF3P18847 181 aa12.72□□□□□ -0.37
CSMD1-209ENST00000520630 C8orf37Q96NL8 207 aa12.72□□□□□ -0.37
CSMD1-209ENST00000520630 LRP5O75197 1615 aa12.72□□□□□ -0.37
CSMD1-209ENST00000520630 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.71□□□□□ -0.38
CSMD1-209ENST00000520630 IQGAP3Q86VI3 1631 aa12.7□□□□□ -0.38
CSMD1-209ENST00000520630 C14orf37Q86TY3 774 aa12.7□□□□□ -0.38
CSMD1-209ENST00000520630 ADGRL2O95490 1459 aa12.7□□□□□ -0.38
CSMD1-209ENST00000520630 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
CSMD1-209ENST00000520630 CHIC2Q9UKJ5 165 aa12.69□□□□□ -0.38
CSMD1-209ENST00000520630 AMOTL2Q9Y2J4 779 aa12.69□□□□□ -0.38
CSMD1-209ENST00000520630 ATRNO75882 1429 aa12.68□□□□□ -0.38
CSMD1-209ENST00000520630 SPHKAPQ2M3C7 1700 aa12.68□□□□□ -0.38
CSMD1-209ENST00000520630 PPP1R15AO75807 674 aaPredicted RBP12.67□□□□□ -0.38
CSMD1-209ENST00000520630 LRRC59Q96AG4 307 aaKnown RBP12.67□□□□□ -0.38
CSMD1-209ENST00000520630 ANKRD30AQ9BXX3 1397 aa12.67□□□□□ -0.38
CSMD1-209ENST00000520630 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
CSMD1-209ENST00000520630 GLI3P10071 1580 aa12.65□□□□□ -0.38
CSMD1-209ENST00000520630 BCL9LQ86UU0 1499 aa12.65□□□□□ -0.38
CSMD1-209ENST00000520630 ADAMTS2O95450 1211 aa12.64□□□□□ -0.39
CSMD1-209ENST00000520630 NGLY1Q96IV0 654 aa12.64□□□□□ -0.39
CSMD1-209ENST00000520630 METP08581 1390 aa12.64□□□□□ -0.39
CSMD1-209ENST00000520630 ADGRL3Q9HAR2 1447 aa12.63□□□□□ -0.39
CSMD1-209ENST00000520630 FNBP4Q8N3X1 1017 aaPredicted RBP12.63□□□□□ -0.39
CSMD1-209ENST00000520630 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.63□□□□□ -0.39
CSMD1-209ENST00000520630 C1orf167Q5SNV9 1468 aa12.63□□□□□ -0.39
CSMD1-209ENST00000520630 RGPD8O14715 1765 aaPredicted RBP12.63□□□□□ -0.39
CSMD1-209ENST00000520630 KIF1BO60333 1816 aa12.62□□□□□ -0.39
CSMD1-209ENST00000520630 HDGFP51858 240 aaKnown RBP12.62□□□□□ -0.39
CSMD1-209ENST00000520630 USP21Q9UK80 565 aa12.62□□□□□ -0.39
CSMD1-209ENST00000520630 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
CSMD1-209ENST00000520630 PTCH1Q13635 1447 aa12.61□□□□□ -0.39
CSMD1-209ENST00000520630 SOS2Q07890 1332 aaPredicted RBP12.61□□□□□ -0.39
CSMD1-209ENST00000520630 MYOM2P54296 1465 aa12.6□□□□□ -0.39
CSMD1-209ENST00000520630 CHGAP10645 457 aaKnown RBP12.6□□□□□ -0.39
CSMD1-209ENST00000520630 TRPC5Q9UL62 973 aaPredicted RBP12.6□□□□□ -0.39
CSMD1-209ENST00000520630 NEXMIFQ5QGS0 1516 aa12.6□□□□□ -0.39
CSMD1-209ENST00000520630 ORAI2Q96SN7 254 aa12.58□□□□□ -0.4
CSMD1-209ENST00000520630 ABCA3Q99758 1704 aa12.58□□□□□ -0.4
CSMD1-209ENST00000520630 CLTCL1P53675 1640 aa12.58□□□□□ -0.4
CSMD1-209ENST00000520630 PLCH1Q4KWH8 1693 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms