RNA–Protein interactions for RNA: ENST00000520276.5

TRPS1-211, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 4,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-211ENST00000520276 MAST1Q9Y2H9 1570 aa13.38□□□□□ -0.27
TRPS1-211ENST00000520276 UHRF1BP1Q6BDS2 1440 aa13.38□□□□□ -0.27
TRPS1-211ENST00000520276 DMRT2Q9Y5R5 561 aa13.38□□□□□ -0.27
TRPS1-211ENST00000520276 ADGBQ8N7X0 1667 aa13.37□□□□□ -0.27
TRPS1-211ENST00000520276 NFKBIBQ15653 356 aa13.36□□□□□ -0.27
TRPS1-211ENST00000520276 POGKQ9P215 609 aa13.36□□□□□ -0.27
TRPS1-211ENST00000520276 PPRC1Q5VV67 1664 aaKnown RBP13.36□□□□□ -0.27
TRPS1-211ENST00000520276 RICTORQ6R327 1708 aa13.35□□□□□ -0.27
TRPS1-211ENST00000520276 KIDINS220Q9ULH0 1771 aa13.35□□□□□ -0.27
TRPS1-211ENST00000520276 PDE4AP27815 886 aa13.35□□□□□ -0.27
TRPS1-211ENST00000520276 STK26Q9P289 416 aa13.35□□□□□ -0.27
TRPS1-211ENST00000520276 PLXNC1O60486 1568 aa13.35□□□□□ -0.27
TRPS1-211ENST00000520276 INO80Q9ULG1 1556 aaPredicted RBP13.34□□□□□ -0.27
TRPS1-211ENST00000520276 ABCA6Q8N139 1617 aa13.34□□□□□ -0.27
TRPS1-211ENST00000520276 SLC4A3P48751 1232 aa13.34□□□□□ -0.27
TRPS1-211ENST00000520276 AGLP35573 1532 aa13.34□□□□□ -0.27
TRPS1-211ENST00000520276 FAM43AQ8N2R8 423 aa13.33□□□□□ -0.28
TRPS1-211ENST00000520276 PODXL2Q9NZ53 605 aa13.33□□□□□ -0.28
TRPS1-211ENST00000520276 KDM4FA0A1W2PPD8 638 aa13.33□□□□□ -0.28
TRPS1-211ENST00000520276 PRKRIP1Q9H875 184 aaPredicted RBP13.33□□□□□ -0.28
TRPS1-211ENST00000520276 FAM135AQ9P2D6 1515 aa13.33□□□□□ -0.28
TRPS1-211ENST00000520276 KDM5DQ9BY66 1539 aa13.32□□□□□ -0.28
TRPS1-211ENST00000520276 L3MBTL2Q969R5 705 aa13.31□□□□□ -0.28
TRPS1-211ENST00000520276 RNF123Q5XPI4 1314 aa13.31□□□□□ -0.28
TRPS1-211ENST00000520276 STAC3Q96MF2 364 aa13.31□□□□□ -0.28
TRPS1-211ENST00000520276 HSPA5P11021 654 aaKnown RBP13.31□□□□□ -0.28
TRPS1-211ENST00000520276 BACH2Q9BYV9 841 aa13.31□□□□□ -0.28
TRPS1-211ENST00000520276 SLC26A8Q96RN1 970 aa13.3□□□□□ -0.28
TRPS1-211ENST00000520276 RPGRIP1LQ68CZ1 1315 aa13.3□□□□□ -0.28
TRPS1-211ENST00000520276 GLIPR1L2Q4G1C9 344 aa13.3□□□□□ -0.28
TRPS1-211ENST00000520276 CARD11Q9BXL7 1154 aa13.3□□□□□ -0.28
TRPS1-211ENST00000520276 CFAP65Q6ZU64 1925 aaKnown RBP13.3□□□□□ -0.28
TRPS1-211ENST00000520276 SMG6Q86US8 1419 aaKnown RBP13.3□□□□□ -0.28
TRPS1-211ENST00000520276 FRMPD1Q5SYB0 1578 aa13.29□□□□□ -0.28
TRPS1-211ENST00000520276 SKAP1Q86WV1 359 aa13.29□□□□□ -0.28
TRPS1-211ENST00000520276 NPATQ14207 1427 aa13.28□□□□□ -0.28
TRPS1-211ENST00000520276 NUDCQ9Y266 331 aa13.28□□□□□ -0.28
TRPS1-211ENST00000520276 CNGB1Q14028 1251 aaPredicted RBP13.28□□□□□ -0.28
TRPS1-211ENST00000520276 PTPRMP28827 1452 aa13.28□□□□□ -0.28
TRPS1-211ENST00000520276 SAFB2Q14151 953 aaKnown RBP eCLIP13.27□□□□□ -0.28
TRPS1-211ENST00000520276 RRAGDQ9NQL2 400 aaPredicted RBP13.27□□□□□ -0.28
TRPS1-211ENST00000520276 CROCC2H7BZ55 1655 aa13.27□□□□□ -0.29
TRPS1-211ENST00000520276 NCKAP5LQ9HCH0 1330 aa13.26□□□□□ -0.29
TRPS1-211ENST00000520276 TCERG1O14776 1098 aaKnown RBP13.26□□□□□ -0.29
TRPS1-211ENST00000520276 ABCC3O15438 1527 aa13.26□□□□□ -0.29
TRPS1-211ENST00000520276 PROSER2Q86WR7 435 aaPredicted RBP13.25□□□□□ -0.29
TRPS1-211ENST00000520276 ANKRD30BQ9BXX2 1392 aa13.25□□□□□ -0.29
TRPS1-211ENST00000520276 FRAT2O75474 233 aaPredicted RBP13.24□□□□□ -0.29
TRPS1-211ENST00000520276 RPRD2Q5VT52 1461 aaKnown RBP13.24□□□□□ -0.29
TRPS1-211ENST00000520276 EIF2AK4Q9P2K8 1649 aaKnown RBP13.24□□□□□ -0.29
TRPS1-211ENST00000520276 PZPP20742 1482 aa13.24□□□□□ -0.29
TRPS1-211ENST00000520276 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
TRPS1-211ENST00000520276 TRAK1Q9UPV9 953 aa13.23□□□□□ -0.29
TRPS1-211ENST00000520276 GCC2Q8IWJ2 1684 aa13.23□□□□□ -0.29
TRPS1-211ENST00000520276 RIMS1Q86UR5 1692 aaKnown RBP13.22□□□□□ -0.29
TRPS1-211ENST00000520276 ARHGAP31Q2M1Z3 1444 aa13.22□□□□□ -0.29
TRPS1-211ENST00000520276 ERVK-7P63135 1459 aa13.22□□□□□ -0.29
TRPS1-211ENST00000520276 EIF4G2P78344 907 aaKnown RBP eCLIP13.22□□□□□ -0.292e-6■■■■■ 26.9
TRPS1-211ENST00000520276 ROCK2O75116 1388 aaKnown RBP13.22□□□□□ -0.29
TRPS1-211ENST00000520276 REREQ9P2R6 1566 aa13.21□□□□□ -0.29
TRPS1-211ENST00000520276 RIMS2Q9UQ26 1411 aa13.21□□□□□ -0.3
TRPS1-211ENST00000520276 CFAP70Q5T0N1 1121 aa13.21□□□□□ -0.3
TRPS1-211ENST00000520276 NLRP1Q9C000 1473 aa13.21□□□□□ -0.3
TRPS1-211ENST00000520276 MADDQ8WXG6 1647 aa13.21□□□□□ -0.3
TRPS1-211ENST00000520276 TMEM132EQ6IEE7 984 aa13.2□□□□□ -0.3
TRPS1-211ENST00000520276 CLTCQ00610 1675 aaKnown RBP13.2□□□□□ -0.3
TRPS1-211ENST00000520276 SLC24A1O60721 1099 aa13.19□□□□□ -0.3
TRPS1-211ENST00000520276 HSP90AA2PQ14568 343 aaPredicted RBP13.19□□□□□ -0.3
TRPS1-211ENST00000520276 PRDM15P57071 1507 aaPredicted RBP13.18□□□□□ -0.3
TRPS1-211ENST00000520276 FER1L4A9Z1Z3 1794 aa13.18□□□□□ -0.3
TRPS1-211ENST00000520276 SETD1BQ9UPS6 1966 aaKnown RBP13.18□□□□□ -0.3
TRPS1-211ENST00000520276 ATF3P18847 181 aa13.18□□□□□ -0.3
TRPS1-211ENST00000520276 SRPK2P78362 688 aaKnown RBP13.18□□□□□ -0.3
TRPS1-211ENST00000520276 DDRGK1Q96HY6 314 aa13.18□□□□□ -0.3
TRPS1-211ENST00000520276 TMEM2Q9UHN6 1383 aa13.17□□□□□ -0.3
TRPS1-211ENST00000520276 UGGT1Q9NYU2 1555 aa13.17□□□□□ -0.3
TRPS1-211ENST00000520276 TMC1Q8TDI8 760 aa13.17□□□□□ -0.3
TRPS1-211ENST00000520276 NAP1L5Q96NT1 182 aaPredicted RBP13.17□□□□□ -0.3
TRPS1-211ENST00000520276 NOS1P29475 1434 aa13.16□□□□□ -0.3
TRPS1-211ENST00000520276 MS4A1P11836 297 aa13.16□□□□□ -0.3
TRPS1-211ENST00000520276 CDCA8Q53HL2 280 aa13.16□□□□□ -0.3
TRPS1-211ENST00000520276 EFCAB6Q5THR3 1501 aa13.16□□□□□ -0.3
TRPS1-211ENST00000520276 CCDC7Q96M83 1385 aa13.16□□□□□ -0.3
TRPS1-211ENST00000520276 BCORL1Q5H9F3 1711 aa13.16□□□□□ -0.3
TRPS1-211ENST00000520276 ADGRF5Q8IZF2 1346 aa13.15□□□□□ -0.3
TRPS1-211ENST00000520276 TET3O43151 1660 aa13.15□□□□□ -0.3
TRPS1-211ENST00000520276 EIF3AQ14152 1382 aaKnown RBP13.15□□□□□ -0.3
TRPS1-211ENST00000520276 A2ML1A8K2U0 1454 aa13.15□□□□□ -0.3
TRPS1-211ENST00000520276 LTKP29376 864 aa13.15□□□□□ -0.3
TRPS1-211ENST00000520276 AMOTL2Q9Y2J4 779 aa13.15□□□□□ -0.3
TRPS1-211ENST00000520276 NUTM2FA1L443 756 aa13.14□□□□□ -0.31
TRPS1-211ENST00000520276 RRP1P56182 461 aaKnown RBP13.14□□□□□ -0.31
TRPS1-211ENST00000520276 UNC13BO14795 1591 aa13.14□□□□□ -0.31
TRPS1-211ENST00000520276 CEP152O94986 1710 aa13.14□□□□□ -0.31
TRPS1-211ENST00000520276 LMOD2Q6P5Q4 547 aa13.14□□□□□ -0.31
TRPS1-211ENST00000520276 LMTK2Q8IWU2 1503 aa13.13□□□□□ -0.31
TRPS1-211ENST00000520276 IQGAP3Q86VI3 1631 aa13.13□□□□□ -0.31
TRPS1-211ENST00000520276 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
TRPS1-211ENST00000520276 TBX22Q9Y458 520 aa13.13□□□□□ -0.31
TRPS1-211ENST00000520276 RNF17Q9BXT8 1623 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms