RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
CTNNA1-218ENST00000519768 DDX12PQ92771 950 aa8.81□□□□□ -1
CTNNA1-218ENST00000519768 CUL7Q14999 1698 aa8.81□□□□□ -1
CTNNA1-218ENST00000519768 KIF21BO75037 1637 aa8.8□□□□□ -1
CTNNA1-218ENST00000519768 MAP3K4Q9Y6R4 1608 aa8.8□□□□□ -1
CTNNA1-218ENST00000519768 PSDA5PKW4 1024 aaPredicted RBP8.8□□□□□ -1
CTNNA1-218ENST00000519768 GRXCR2A6NFK2 248 aa8.8□□□□□ -1
CTNNA1-218ENST00000519768 EPAS1Q99814 870 aa8.8□□□□□ -1
CTNNA1-218ENST00000519768 PTPRMP28827 1452 aa8.79□□□□□ -1
CTNNA1-218ENST00000519768 PLB1Q6P1J6 1458 aa8.79□□□□□ -1
CTNNA1-218ENST00000519768 FOSBP53539 338 aa8.79□□□□□ -1
CTNNA1-218ENST00000519768 LHX6Q9UPM6 363 aa8.79□□□□□ -1
CTNNA1-218ENST00000519768 TOP2BQ02880 1626 aa8.79□□□□□ -1
CTNNA1-218ENST00000519768 OSBPP22059 807 aa8.78□□□□□ -1
CTNNA1-218ENST00000519768 PCDHGA10Q9Y5H3 936 aa8.78□□□□□ -1
CTNNA1-218ENST00000519768 KIAA0586Q9BVV6 1533 aa8.78□□□□□ -1
CTNNA1-218ENST00000519768 FBXW7Q969H0 707 aa8.77□□□□□ -1.01
CTNNA1-218ENST00000519768 TYW1BQ6NUM6 668 aa8.76□□□□□ -1.01
CTNNA1-218ENST00000519768 LMOD2Q6P5Q4 547 aa8.76□□□□□ -1.01
CTNNA1-218ENST00000519768 ZNF454Q8N9F8 522 aa8.76□□□□□ -1.01
CTNNA1-218ENST00000519768 HCSTQ9UBK5 93 aa8.76□□□□□ -1.01
CTNNA1-218ENST00000519768 ADAMTSL3P82987 1691 aa8.75□□□□□ -1.01
CTNNA1-218ENST00000519768 IGF1RP08069 1367 aa8.74□□□□□ -1.01
CTNNA1-218ENST00000519768 TNIKQ9UKE5 1360 aa8.74□□□□□ -1.01
CTNNA1-218ENST00000519768 BIVM-ERCC5R4GMW8 1640 aa8.74□□□□□ -1.01
CTNNA1-218ENST00000519768 LSM11P83369 360 aaKnown RBP eCLIP8.74□□□□□ -1.01
CTNNA1-218ENST00000519768 PPP4R3BQ5MIZ7 849 aa8.74□□□□□ -1.01
CTNNA1-218ENST00000519768 ZDHHC16Q969W1 377 aa8.74□□□□□ -1.01
CTNNA1-218ENST00000519768 KCNH8Q96L42 1107 aa8.74□□□□□ -1.01
CTNNA1-218ENST00000519768 PCF11O94913 1555 aaKnown RBP8.73□□□□□ -1.01
CTNNA1-218ENST00000519768 EN1Q05925 392 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-218ENST00000519768 RBM26Q5T8P6 1007 aaKnown RBP8.73□□□□□ -1.01
CTNNA1-218ENST00000519768 UACAQ9BZF9 1416 aa8.72□□□□□ -1.01
CTNNA1-218ENST00000519768 UHRF1BP1LA0JNW5 1464 aa8.72□□□□□ -1.01
CTNNA1-218ENST00000519768 KDM5BQ9UGL1 1544 aa8.72□□□□□ -1.01
CTNNA1-218ENST00000519768 TEX14Q8IWB6 1497 aa8.71□□□□□ -1.01
CTNNA1-218ENST00000519768 RAPGEF3O95398 923 aa8.71□□□□□ -1.02
CTNNA1-218ENST00000519768 PRIM1P49642 420 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-218ENST00000519768 ZCCHC11Q5TAX3 1644 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-218ENST00000519768 MAP3K7O43318 606 aa8.7□□□□□ -1.02
CTNNA1-218ENST00000519768 BCL2L12Q9HB09 334 aa8.7□□□□□ -1.02
CTNNA1-218ENST00000519768 CD109Q6YHK3 1445 aa8.7□□□□□ -1.02
CTNNA1-218ENST00000519768 DISP1Q96F81 1524 aa8.7□□□□□ -1.02
CTNNA1-218ENST00000519768 SPATA31D1Q6ZQQ2 1576 aa8.69□□□□□ -1.02
CTNNA1-218ENST00000519768 MADDQ8WXG6 1647 aa8.69□□□□□ -1.02
CTNNA1-218ENST00000519768 ADAM33Q9BZ11 813 aa8.69□□□□□ -1.02
CTNNA1-218ENST00000519768 IRX2Q9BZI1 471 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-218ENST00000519768 C6orf132Q5T0Z8 1188 aa8.68□□□□□ -1.02
CTNNA1-218ENST00000519768 GPIHBP1Q8IV16 184 aa8.68□□□□□ -1.02
CTNNA1-218ENST00000519768 RBM33Q96EV2 1170 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-218ENST00000519768 NUTM2FA1L443 756 aa8.67□□□□□ -1.02
CTNNA1-218ENST00000519768 MAGI3Q5TCQ9 1506 aa8.67□□□□□ -1.02
CTNNA1-218ENST00000519768 BCORL1Q5H9F3 1711 aa8.66□□□□□ -1.02
CTNNA1-218ENST00000519768 WDR7Q9Y4E6 1490 aa8.65□□□□□ -1.02
CTNNA1-218ENST00000519768 ARID4BQ4LE39 1312 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-218ENST00000519768 PTPREP23469 700 aa8.65□□□□□ -1.02
CTNNA1-218ENST00000519768 PTGDRQ13258 359 aa8.65□□□□□ -1.02
CTNNA1-218ENST00000519768 TSR1Q2NL82 804 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-218ENST00000519768 ZC3H15Q8WU90 426 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-218ENST00000519768 CARMIL2Q6F5E8 1435 aa8.64□□□□□ -1.03
CTNNA1-218ENST00000519768 ARID3CA6NKF2 412 aa8.64□□□□□ -1.03
CTNNA1-218ENST00000519768 GPR37O15354 613 aa8.64□□□□□ -1.03
CTNNA1-218ENST00000519768 FCHSD2O94868 740 aa8.64□□□□□ -1.03
CTNNA1-218ENST00000519768 PBX2P40425 430 aa8.64□□□□□ -1.03
CTNNA1-218ENST00000519768 NPDC1Q9NQX5 325 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-218ENST00000519768 RIMS1Q86UR5 1692 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-218ENST00000519768 SIGLEC1Q9BZZ2 1709 aa8.63□□□□□ -1.03
CTNNA1-218ENST00000519768 ARHGAP33O14559 1287 aa8.62□□□□□ -1.03
CTNNA1-218ENST00000519768 ZMYND10O75800 440 aa8.62□□□□□ -1.03
CTNNA1-218ENST00000519768 HIC1Q14526 733 aa8.62□□□□□ -1.03
CTNNA1-218ENST00000519768 TPRNQ4KMQ1 711 aa8.62□□□□□ -1.03
CTNNA1-218ENST00000519768 CDHR5Q9HBB8 845 aa8.62□□□□□ -1.03
CTNNA1-218ENST00000519768 ARAP3Q8WWN8 1544 aa8.62□□□□□ -1.03
CTNNA1-218ENST00000519768 CARMIL1Q5VZK9 1371 aa8.61□□□□□ -1.03
CTNNA1-218ENST00000519768 PPP1R3GB7ZBB8 358 aa8.61□□□□□ -1.03
CTNNA1-218ENST00000519768 RGS20O76081 388 aa8.61□□□□□ -1.03
CTNNA1-218ENST00000519768 CEBPAP49715 358 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-218ENST00000519768 STRCQ7RTU9 1775 aa8.61□□□□□ -1.03
CTNNA1-218ENST00000519768 CFAP43Q8NDM7 1665 aa8.6□□□□□ -1.03
CTNNA1-218ENST00000519768 MLECQ14165 292 aa8.6□□□□□ -1.03
CTNNA1-218ENST00000519768 POTEEQ6S8J3 1075 aa8.6□□□□□ -1.03
CTNNA1-218ENST00000519768 KCNK17Q96T54 332 aa8.6□□□□□ -1.03
CTNNA1-218ENST00000519768 SUPT5HO00267 1087 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-218ENST00000519768 GNPATO15228 680 aa8.59□□□□□ -1.03
CTNNA1-218ENST00000519768 COL9A1P20849 921 aa8.59□□□□□ -1.03
CTNNA1-218ENST00000519768 BARGINQ6ZT62 677 aa8.59□□□□□ -1.03
CTNNA1-218ENST00000519768 RBM27Q9P2N5 1060 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-218ENST00000519768 IQGAP2Q13576 1575 aa8.58□□□□□ -1.04
CTNNA1-218ENST00000519768 FRMPD1Q5SYB0 1578 aa8.58□□□□□ -1.04
CTNNA1-218ENST00000519768 PSEN2P49810 448 aa8.57□□□□□ -1.04
CTNNA1-218ENST00000519768 PRSS12P56730 875 aa8.57□□□□□ -1.04
CTNNA1-218ENST00000519768 SLC4A5Q9BY07 1137 aa8.57□□□□□ -1.04
CTNNA1-218ENST00000519768 ONECUT3O60422 494 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-218ENST00000519768 TTC13Q8NBP0 860 aa8.56□□□□□ -1.04
CTNNA1-218ENST00000519768 AXIN2Q9Y2T1 843 aa8.56□□□□□ -1.04
CTNNA1-218ENST00000519768 LTBP4Q8N2S1 1624 aa8.55□□□□□ -1.04
CTNNA1-218ENST00000519768 CDCA7LQ96GN5 454 aa8.55□□□□□ -1.04
CTNNA1-218ENST00000519768 ZBED2Q9BTP6 218 aa8.55□□□□□ -1.04
CTNNA1-218ENST00000519768 MINK1Q8N4C8 1332 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-218ENST00000519768 KIF27Q86VH2 1401 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms