RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 PCDHB3Q9Y5E6 796 aa5.6□□□□□ -1.51
CCNC-208ENST00000519617 ADGRG1Q9Y653 693 aa5.6□□□□□ -1.51
CCNC-208ENST00000519617 TMEM134Q9H6X4 195 aa5.59□□□□□ -1.51
CCNC-208ENST00000519617 PDZRN3Q9UPQ7 1066 aa5.59□□□□□ -1.51
CCNC-208ENST00000519617 ACTN4O43707 911 aaKnown RBP5.58□□□□□ -1.52
CCNC-208ENST00000519617 BLOC1S3Q6QNY0 202 aa5.58□□□□□ -1.52
CCNC-208ENST00000519617 RCCD1A6NED2 376 aa5.57□□□□□ -1.52
CCNC-208ENST00000519617 RNF223E7ERA6 249 aa5.57□□□□□ -1.52
CCNC-208ENST00000519617 SLC19A1P41440 591 aa5.56□□□□□ -1.52
CCNC-208ENST00000519617 KMT5BQ4FZB7 885 aa5.56□□□□□ -1.52
CCNC-208ENST00000519617 TRIM67Q6ZTA4 783 aa5.56□□□□□ -1.52
CCNC-208ENST00000519617 EMID1Q96A84 441 aaPredicted RBP5.56□□□□□ -1.52
CCNC-208ENST00000519617 NUTM2FA1L443 756 aa5.55□□□□□ -1.52
CCNC-208ENST00000519617 FCHSD2O94868 740 aa5.55□□□□□ -1.52
CCNC-208ENST00000519617 ANKLE1Q8NAG6 615 aa5.55□□□□□ -1.52
CCNC-208ENST00000519617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.54□□□□□ -1.52
CCNC-208ENST00000519617 TLL1O43897 1013 aa5.54□□□□□ -1.52
CCNC-208ENST00000519617 CFHP08603 1231 aa5.54□□□□□ -1.52
CCNC-208ENST00000519617 SLC10A3P09131 477 aa5.54□□□□□ -1.52
CCNC-208ENST00000519617 FAM161AQ3B820 660 aa5.54□□□□□ -1.52
CCNC-208ENST00000519617 SPRYD7Q5W111 196 aa5.54□□□□□ -1.52
CCNC-208ENST00000519617 ZNF787Q6DD87 383 aa5.54□□□□□ -1.52
CCNC-208ENST00000519617 OATP04181 439 aa5.53□□□□□ -1.52
CCNC-208ENST00000519617 PRR20EP86478 221 aa5.53□□□□□ -1.52
CCNC-208ENST00000519617 PRR20CP86479 221 aa5.53□□□□□ -1.52
CCNC-208ENST00000519617 PRR20DP86480 221 aa5.53□□□□□ -1.52
CCNC-208ENST00000519617 PRR20BP86481 221 aa5.53□□□□□ -1.52
CCNC-208ENST00000519617 PRR20AP86496 221 aa5.53□□□□□ -1.52
CCNC-208ENST00000519617 ZNF598Q86UK7 904 aaKnown RBP5.53□□□□□ -1.52
CCNC-208ENST00000519617 P3H3Q8IVL6 736 aa5.53□□□□□ -1.52
CCNC-208ENST00000519617 NR1I2O75469 434 aa5.52□□□□□ -1.53
CCNC-208ENST00000519617 S1PR4O95977 384 aa5.52□□□□□ -1.53
CCNC-208ENST00000519617 ADH1BP00325 375 aa5.52□□□□□ -1.53
CCNC-208ENST00000519617 LIAT1Q6ZQX7 453 aa5.52□□□□□ -1.53
CCNC-208ENST00000519617 PXYLP1Q8TE99 480 aa5.52□□□□□ -1.53
CCNC-208ENST00000519617 PPEF1O14829 653 aaPredicted RBP5.51□□□□□ -1.53
CCNC-208ENST00000519617 SEMA3EO15041 775 aa5.51□□□□□ -1.53
CCNC-208ENST00000519617 DGAT1O75907 488 aa5.51□□□□□ -1.53
CCNC-208ENST00000519617 HIC1Q14526 733 aa5.5□□□□□ -1.53
CCNC-208ENST00000519617 SCUBE3Q8IX30 993 aa5.5□□□□□ -1.53
CCNC-208ENST00000519617 GDF9O60383 454 aa5.49□□□□□ -1.53
CCNC-208ENST00000519617 MYT1Q01538 1121 aa5.49□□□□□ -1.53
CCNC-208ENST00000519617 RSPH4AQ5TD94 716 aa5.49□□□□□ -1.53
CCNC-208ENST00000519617 ZNF697Q5TEC3 545 aa5.49□□□□□ -1.53
CCNC-208ENST00000519617 METTL3Q86U44 580 aaKnown RBP5.49□□□□□ -1.53
CCNC-208ENST00000519617 SLC6A16Q9GZN6 736 aa5.49□□□□□ -1.53
CCNC-208ENST00000519617 PKDCCQ504Y2 493 aa5.48□□□□□ -1.53
CCNC-208ENST00000519617 ZNF775Q96BV0 537 aaPredicted RBP5.48□□□□□ -1.53
CCNC-208ENST00000519617 TESPA1A2RU30 521 aaPredicted RBP5.47□□□□□ -1.53
CCNC-208ENST00000519617 PLA2G2CQ5R387 149 aa5.47□□□□□ -1.53
CCNC-208ENST00000519617 SPSB2Q99619 263 aa5.47□□□□□ -1.53
CCNC-208ENST00000519617 PUS10Q3MIT2 529 aaKnown RBP5.46□□□□□ -1.54
CCNC-208ENST00000519617 RBM26Q5T8P6 1007 aaKnown RBP5.46□□□□□ -1.54
CCNC-208ENST00000519617 SMYD5Q6GMV2 418 aa5.46□□□□□ -1.54
CCNC-208ENST00000519617 DAXXQ9UER7 740 aaPredicted RBP5.46□□□□□ -1.54
CCNC-208ENST00000519617 TNFRSF10AO00220 468 aa5.45□□□□□ -1.54
CCNC-208ENST00000519617 GNPATO15228 680 aa5.45□□□□□ -1.54
CCNC-208ENST00000519617 MORN1Q5T089 497 aa5.45□□□□□ -1.54
CCNC-208ENST00000519617 LMOD2Q6P5Q4 547 aa5.45□□□□□ -1.54
CCNC-208ENST00000519617 THAP11Q96EK4 314 aa5.45□□□□□ -1.54
CCNC-208ENST00000519617 FAM187AA6NFU0 413 aa5.44□□□□□ -1.54
CCNC-208ENST00000519617 POTECB2RU33 542 aa5.44□□□□□ -1.54
CCNC-208ENST00000519617 GPR37O15354 613 aa5.44□□□□□ -1.54
CCNC-208ENST00000519617 FECHP22830 423 aa5.44□□□□□ -1.54
CCNC-208ENST00000519617 RPIAP49247 311 aa5.44□□□□□ -1.54
CCNC-208ENST00000519617 PKD2L1Q9P0L9 805 aa5.44□□□□□ -1.54
CCNC-208ENST00000519617 ATP6V1AP38606 617 aa5.43□□□□□ -1.54
CCNC-208ENST00000519617 SALL2Q9Y467 1007 aaPredicted RBP5.43□□□□□ -1.54
CCNC-208ENST00000519617 GCGRP47871 477 aa5.42□□□□□ -1.54
CCNC-208ENST00000519617 FUT2Q10981 343 aa5.42□□□□□ -1.54
CCNC-208ENST00000519617 FAM160A2Q8N612 972 aaPredicted RBP5.42□□□□□ -1.54
CCNC-208ENST00000519617 RDH13Q8NBN7 331 aa5.42□□□□□ -1.54
CCNC-208ENST00000519617 AAASQ9NRG9 546 aa5.42□□□□□ -1.54
CCNC-208ENST00000519617 DDX11L8A8MPP1 907 aa5.41□□□□□ -1.54
CCNC-208ENST00000519617 CD2BP2O95400 341 aaKnown RBP5.41□□□□□ -1.54
CCNC-208ENST00000519617 FMNL1O95466 1100 aaPredicted RBP5.41□□□□□ -1.54
CCNC-208ENST00000519617 BRICD5Q6PL45 260 aa5.41□□□□□ -1.54
CCNC-208ENST00000519617 CRIPAKQ8N1N5 446 aa5.41□□□□□ -1.54
CCNC-208ENST00000519617 SLC27A5Q9Y2P5 690 aa5.41□□□□□ -1.54
CCNC-208ENST00000519617 AVPP01185 164 aa5.4□□□□□ -1.54
CCNC-208ENST00000519617 FOXC1Q12948 553 aa5.4□□□□□ -1.54
CCNC-208ENST00000519617 SULF1Q8IWU6 871 aa5.4□□□□□ -1.54
CCNC-208ENST00000519617 PHOX2BQ99453 314 aa5.4□□□□□ -1.54
CCNC-208ENST00000519617 TOR4AQ9NXH8 423 aa5.4□□□□□ -1.54
CCNC-208ENST00000519617 FCF1Q9Y324 198 aaKnown RBP5.4□□□□□ -1.54
CCNC-208ENST00000519617 ST8SIA5O15466 376 aa5.39□□□□□ -1.55
CCNC-208ENST00000519617 NLRP7Q8WX94 980 aa5.39□□□□□ -1.55
CCNC-208ENST00000519617 MSS51Q4VC12 460 aa5.38□□□□□ -1.55
CCNC-208ENST00000519617 PLCB2Q00722 1185 aa5.37□□□□□ -1.55
CCNC-208ENST00000519617 GRIPAP1Q4V328 841 aa5.37□□□□□ -1.55
CCNC-208ENST00000519617 LCE2AQ5TA79 106 aaPredicted RBP5.37□□□□□ -1.55
CCNC-208ENST00000519617 TREML4Q6UXN2 200 aa5.37□□□□□ -1.55
CCNC-208ENST00000519617 CYP4X1Q8N118 509 aa5.37□□□□□ -1.55
CCNC-208ENST00000519617 SMCPP49901 116 aaPredicted RBP5.36□□□□□ -1.55
CCNC-208ENST00000519617 CTC1Q2NKJ3 1217 aa5.36□□□□□ -1.55
CCNC-208ENST00000519617 RNF19BQ6ZMZ0 732 aa5.36□□□□□ -1.55
CCNC-208ENST00000519617 PRDM9Q9NQV7 894 aa5.36□□□□□ -1.55
CCNC-208ENST00000519617 AXIN1O15169 862 aa5.35□□□□□ -1.55
CCNC-208ENST00000519617 ZBTB24O43167 697 aaPredicted RBP5.35□□□□□ -1.55
CCNC-208ENST00000519617 MMP16P51512 607 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms