RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 A2MP01023 1474 aa13.6□□□□□ -0.23
SH2D4A-204ENST00000519207 SPAG9O60271 1321 aaKnown RBP13.6□□□□□ -0.23
SH2D4A-204ENST00000519207 SMG6Q86US8 1419 aaKnown RBP13.6□□□□□ -0.23
SH2D4A-204ENST00000519207 RALBP1Q15311 655 aa13.6□□□□□ -0.23
SH2D4A-204ENST00000519207 PPP4R2Q9NY27 417 aa13.6□□□□□ -0.23
SH2D4A-204ENST00000519207 EIF2AK4Q9P2K8 1649 aaKnown RBP13.6□□□□□ -0.23
SH2D4A-204ENST00000519207 PREX1Q8TCU6 1659 aa13.59□□□□□ -0.23
SH2D4A-204ENST00000519207 SETD1BQ9UPS6 1966 aaKnown RBP13.59□□□□□ -0.23
SH2D4A-204ENST00000519207 PNISRQ8TF01 805 aaKnown RBP13.58□□□□□ -0.24
SH2D4A-204ENST00000519207 BRD4O60885 1362 aaPredicted RBP13.58□□□□□ -0.24
SH2D4A-204ENST00000519207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.58□□□□□ -0.242e-7■■□□□ 13.4
SH2D4A-204ENST00000519207 PRDM15P57071 1507 aaPredicted RBP13.57□□□□□ -0.24
SH2D4A-204ENST00000519207 RTEL1-TNFRSF6BF6WH68 1400 aa13.57□□□□□ -0.24
SH2D4A-204ENST00000519207 IRX6P78412 446 aaPredicted RBP13.56□□□□□ -0.24
SH2D4A-204ENST00000519207 TMC1Q8TDI8 760 aa13.56□□□□□ -0.24
SH2D4A-204ENST00000519207 MYBBP1AQ9BQG0 1328 aaKnown RBP13.56□□□□□ -0.24
SH2D4A-204ENST00000519207 C3P01024 1663 aa13.56□□□□□ -0.24
SH2D4A-204ENST00000519207 PAK3O75914 559 aaPredicted RBP13.56□□□□□ -0.24
SH2D4A-204ENST00000519207 CERKQ8TCT0 537 aa13.56□□□□□ -0.24
SH2D4A-204ENST00000519207 LRPPRCP42704 1394 aaKnown RBP13.55□□□□□ -0.24
SH2D4A-204ENST00000519207 KCNA4P22459 653 aa13.55□□□□□ -0.24
SH2D4A-204ENST00000519207 RGL3Q3MIN7 710 aa13.54□□□□□ -0.24
SH2D4A-204ENST00000519207 NUDCQ9Y266 331 aa13.54□□□□□ -0.24
SH2D4A-204ENST00000519207 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
SH2D4A-204ENST00000519207 WASHC2CQ9Y4E1 1318 aa13.54□□□□□ -0.24
SH2D4A-204ENST00000519207 STRCQ7RTU9 1775 aa13.53□□□□□ -0.24
SH2D4A-204ENST00000519207 ATP7AQ04656 1500 aa13.53□□□□□ -0.24
SH2D4A-204ENST00000519207 NBPF1Q3BBV0 1214 aa13.53□□□□□ -0.24
SH2D4A-204ENST00000519207 ZMYM3Q14202 1370 aa13.53□□□□□ -0.24
SH2D4A-204ENST00000519207 RNF123Q5XPI4 1314 aa13.52□□□□□ -0.24
SH2D4A-204ENST00000519207 GGT6Q6P531 493 aa13.52□□□□□ -0.25
SH2D4A-204ENST00000519207 STAC3Q96MF2 364 aa13.52□□□□□ -0.25
SH2D4A-204ENST00000519207 PARD3Q8TEW0 1356 aa13.52□□□□□ -0.25
SH2D4A-204ENST00000519207 RNF17Q9BXT8 1623 aaKnown RBP13.51□□□□□ -0.25
SH2D4A-204ENST00000519207 IL27Q8NEV9 243 aa13.51□□□□□ -0.25
SH2D4A-204ENST00000519207 TESK2Q96S53 571 aa13.51□□□□□ -0.25
SH2D4A-204ENST00000519207 INO80Q9ULG1 1556 aaPredicted RBP13.51□□□□□ -0.25
SH2D4A-204ENST00000519207 PER1O15534 1290 aaPredicted RBP13.5□□□□□ -0.25
SH2D4A-204ENST00000519207 DEPDC5O75140 1603 aa13.5□□□□□ -0.25
SH2D4A-204ENST00000519207 CNGB1Q14028 1251 aaPredicted RBP13.5□□□□□ -0.25
SH2D4A-204ENST00000519207 NLRP13Q86W25 1043 aa13.5□□□□□ -0.25
SH2D4A-204ENST00000519207 TRPM2O94759 1503 aa13.49□□□□□ -0.25
SH2D4A-204ENST00000519207 PTPRTO14522 1441 aa13.49□□□□□ -0.25
SH2D4A-204ENST00000519207 NPATQ14207 1427 aa13.48□□□□□ -0.25
SH2D4A-204ENST00000519207 INSRP06213 1382 aa13.47□□□□□ -0.25
SH2D4A-204ENST00000519207 TMF1P82094 1093 aa13.47□□□□□ -0.25
SH2D4A-204ENST00000519207 CEP152O94986 1710 aa13.47□□□□□ -0.25
SH2D4A-204ENST00000519207 SPHKAPQ2M3C7 1700 aa13.47□□□□□ -0.25
SH2D4A-204ENST00000519207 DISP3Q9P2K9 1392 aa13.47□□□□□ -0.25
SH2D4A-204ENST00000519207 IPO9Q96P70 1041 aaKnown RBP13.47□□□□□ -0.25
SH2D4A-204ENST00000519207 MROH2AA6NES4 1674 aa13.46□□□□□ -0.25
SH2D4A-204ENST00000519207 TET3O43151 1660 aa13.46□□□□□ -0.25
SH2D4A-204ENST00000519207 NBR1Q14596 966 aa13.46□□□□□ -0.25
SH2D4A-204ENST00000519207 CCDC136Q96JN2 1154 aa13.46□□□□□ -0.25
SH2D4A-204ENST00000519207 VWDEQ8N2E2 1590 aa13.45□□□□□ -0.26
SH2D4A-204ENST00000519207 NEURL4Q96JN8 1562 aa13.45□□□□□ -0.26
SH2D4A-204ENST00000519207 CLTCQ00610 1675 aaKnown RBP13.45□□□□□ -0.26
SH2D4A-204ENST00000519207 IQGAP1P46940 1657 aa13.44□□□□□ -0.26
SH2D4A-204ENST00000519207 KANK1Q14678 1352 aa13.44□□□□□ -0.26
SH2D4A-204ENST00000519207 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
SH2D4A-204ENST00000519207 KIF3BO15066 747 aa13.43□□□□□ -0.26
SH2D4A-204ENST00000519207 PDE3BQ13370 1112 aa13.43□□□□□ -0.26
SH2D4A-204ENST00000519207 CLTCL1P53675 1640 aa13.42□□□□□ -0.26
SH2D4A-204ENST00000519207 CAMSAP1Q5T5Y3 1602 aa13.42□□□□□ -0.26
SH2D4A-204ENST00000519207 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
SH2D4A-204ENST00000519207 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
SH2D4A-204ENST00000519207 PANK3Q9H999 370 aa13.41□□□□□ -0.26
SH2D4A-204ENST00000519207 KIAA1210Q9ULL0 1709 aa13.41□□□□□ -0.26
SH2D4A-204ENST00000519207 RTL5Q5HYW3 569 aaPredicted RBP13.41□□□□□ -0.26
SH2D4A-204ENST00000519207 SCAF11Q99590 1463 aaKnown RBP13.4□□□□□ -0.26
SH2D4A-204ENST00000519207 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
SH2D4A-204ENST00000519207 FBXO31Q5XUX0 539 aaPredicted RBP13.39□□□□□ -0.27
SH2D4A-204ENST00000519207 LTBP4Q8N2S1 1624 aa13.39□□□□□ -0.27
SH2D4A-204ENST00000519207 MYO3AQ8NEV4 1616 aa13.38□□□□□ -0.27
SH2D4A-204ENST00000519207 BLMP54132 1417 aaPredicted RBP13.38□□□□□ -0.27
SH2D4A-204ENST00000519207 MROH1Q8NDA8 1641 aa13.37□□□□□ -0.27
SH2D4A-204ENST00000519207 SYNMO15061 1565 aa13.37□□□□□ -0.27
SH2D4A-204ENST00000519207 CEP170BQ9Y4F5 1589 aaPredicted RBP13.37□□□□□ -0.27
SH2D4A-204ENST00000519207 SLC24A1O60721 1099 aa13.36□□□□□ -0.27
SH2D4A-204ENST00000519207 CC2D1BQ5T0F9 858 aaKnown RBP13.36□□□□□ -0.27
SH2D4A-204ENST00000519207 ZNF335Q9H4Z2 1342 aaPredicted RBP13.36□□□□□ -0.27
SH2D4A-204ENST00000519207 EIF3AQ14152 1382 aaKnown RBP13.36□□□□□ -0.27
SH2D4A-204ENST00000519207 ANP32AP39687 249 aaKnown RBP13.36□□□□□ -0.27
SH2D4A-204ENST00000519207 MYOM2P54296 1465 aa13.35□□□□□ -0.27
SH2D4A-204ENST00000519207 ZNF142P52746 1687 aaPredicted RBP13.35□□□□□ -0.27
SH2D4A-204ENST00000519207 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
SH2D4A-204ENST00000519207 LMTK2Q8IWU2 1503 aa13.34□□□□□ -0.27
SH2D4A-204ENST00000519207 KIF1BO60333 1816 aa13.34□□□□□ -0.27
SH2D4A-204ENST00000519207 RRP1P56182 461 aaKnown RBP13.34□□□□□ -0.27
SH2D4A-204ENST00000519207 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.34□□□□□ -0.27
SH2D4A-204ENST00000519207 RCAN3Q9UKA8 241 aa13.34□□□□□ -0.27
SH2D4A-204ENST00000519207 KNSTRNQ9Y448 316 aa13.34□□□□□ -0.27
SH2D4A-204ENST00000519207 NPC1L1Q9UHC9 1359 aa13.34□□□□□ -0.27
SH2D4A-204ENST00000519207 EFCAB6Q5THR3 1501 aa13.34□□□□□ -0.27
SH2D4A-204ENST00000519207 A2ML1A8K2U0 1454 aa13.33□□□□□ -0.28
SH2D4A-204ENST00000519207 TNRQ92752 1358 aa13.33□□□□□ -0.28
SH2D4A-204ENST00000519207 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
SH2D4A-204ENST00000519207 IFT172Q9UG01 1749 aa13.31□□□□□ -0.28
SH2D4A-204ENST00000519207 SENP3-EIF4A1A0A087X0R7 540 aa13.31□□□□□ -0.28
SH2D4A-204ENST00000519207 ASXL1Q8IXJ9 1541 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms