RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 ABCA9Q8IUA7 1624 aa11.26□□□□□ -0.61
CTNNA1-210ENST00000518825 TET3O43151 1660 aa11.26□□□□□ -0.61
CTNNA1-210ENST00000518825 SKAP1Q86WV1 359 aa11.26□□□□□ -0.61
CTNNA1-210ENST00000518825 SYNMO15061 1565 aa11.26□□□□□ -0.61
CTNNA1-210ENST00000518825 NOP58Q9Y2X3 529 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-210ENST00000518825 ATP7AQ04656 1500 aa11.25□□□□□ -0.61
CTNNA1-210ENST00000518825 C20orf194Q5TEA3 1177 aa11.25□□□□□ -0.61
CTNNA1-210ENST00000518825 ERICH6Q7L0X2 663 aa11.25□□□□□ -0.61
CTNNA1-210ENST00000518825 ZNF521Q96K83 1311 aa11.25□□□□□ -0.61
CTNNA1-210ENST00000518825 FANCAO15360 1455 aa11.24□□□□□ -0.61
CTNNA1-210ENST00000518825 IPO9Q96P70 1041 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-210ENST00000518825 CRBNQ96SW2 442 aa11.23□□□□□ -0.61
CTNNA1-210ENST00000518825 DUSP27Q5VZP5 1158 aa11.22□□□□□ -0.61
CTNNA1-210ENST00000518825 KNSTRNQ9Y448 316 aa11.22□□□□□ -0.61
CTNNA1-210ENST00000518825 ASXL1Q8IXJ9 1541 aa11.22□□□□□ -0.61
CTNNA1-210ENST00000518825 ABCA6Q8N139 1617 aa11.22□□□□□ -0.61
CTNNA1-210ENST00000518825 ADGRF5Q8IZF2 1346 aa11.22□□□□□ -0.61
CTNNA1-210ENST00000518825 KIAA1210Q9ULL0 1709 aa11.22□□□□□ -0.61
CTNNA1-210ENST00000518825 CFAP70Q5T0N1 1121 aa11.22□□□□□ -0.61
CTNNA1-210ENST00000518825 KIF3BO15066 747 aa11.21□□□□□ -0.61
CTNNA1-210ENST00000518825 ERVK-7P63135 1459 aa11.21□□□□□ -0.61
CTNNA1-210ENST00000518825 NEURL4Q96JN8 1562 aa11.21□□□□□ -0.61
CTNNA1-210ENST00000518825 MROH2AA6NES4 1674 aa11.21□□□□□ -0.62
CTNNA1-210ENST00000518825 MAP3K4Q9Y6R4 1608 aa11.21□□□□□ -0.62
CTNNA1-210ENST00000518825 CARD14Q9BXL6 1004 aa11.21□□□□□ -0.62
CTNNA1-210ENST00000518825 IFT172Q9UG01 1749 aa11.2□□□□□ -0.62
CTNNA1-210ENST00000518825 SPINK5Q9NQ38 1064 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-210ENST00000518825 PDE4AP27815 886 aa11.2□□□□□ -0.62
CTNNA1-210ENST00000518825 PIK3C2GO75747 1445 aa11.2□□□□□ -0.62
CTNNA1-210ENST00000518825 BACH2Q9BYV9 841 aa11.19□□□□□ -0.62
CTNNA1-210ENST00000518825 ADGRL1O94910 1474 aa11.19□□□□□ -0.62
CTNNA1-210ENST00000518825 KIDINS220Q9ULH0 1771 aa11.19□□□□□ -0.62
CTNNA1-210ENST00000518825 TCERG1O14776 1098 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-210ENST00000518825 PPRC1Q5VV67 1664 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-210ENST00000518825 NPC1L1Q9UHC9 1359 aa11.19□□□□□ -0.62
CTNNA1-210ENST00000518825 STAC3Q96MF2 364 aa11.19□□□□□ -0.62
CTNNA1-210ENST00000518825 MYOM2P54296 1465 aa11.19□□□□□ -0.62
CTNNA1-210ENST00000518825 KDM5AP29375 1690 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-210ENST00000518825 EFCAB6Q5THR3 1501 aa11.18□□□□□ -0.62
CTNNA1-210ENST00000518825 NRXN1Q9ULB1 1477 aa11.18□□□□□ -0.62
CTNNA1-210ENST00000518825 ANP32AP39687 249 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-210ENST00000518825 TRMT2AQ8IZ69 625 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-210ENST00000518825 KDM2BQ8NHM5 1336 aa11.18□□□□□ -0.62
CTNNA1-210ENST00000518825 NBR1Q14596 966 aa11.17□□□□□ -0.62
CTNNA1-210ENST00000518825 CCDC146Q8IYE0 955 aa11.17□□□□□ -0.62
CTNNA1-210ENST00000518825 DMRT2Q9Y5R5 561 aa11.17□□□□□ -0.62
CTNNA1-210ENST00000518825 KANK1Q14678 1352 aa11.16□□□□□ -0.62
CTNNA1-210ENST00000518825 ASXL2Q76L83 1435 aa11.16□□□□□ -0.62
CTNNA1-210ENST00000518825 SLFN5Q08AF3 891 aa11.16□□□□□ -0.62
CTNNA1-210ENST00000518825 WDR43Q15061 677 aaKnown RBP eCLIP11.16□□□□□ -0.62
CTNNA1-210ENST00000518825 CDCA8Q53HL2 280 aa11.16□□□□□ -0.62
CTNNA1-210ENST00000518825 KIF1BO60333 1816 aa11.15□□□□□ -0.62
CTNNA1-210ENST00000518825 MS4A1P11836 297 aa11.15□□□□□ -0.62
CTNNA1-210ENST00000518825 MYO3AQ8NEV4 1616 aa11.15□□□□□ -0.62
CTNNA1-210ENST00000518825 EIF3AQ14152 1382 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-210ENST00000518825 GOLGA2Q08379 1002 aa11.14□□□□□ -0.63
CTNNA1-210ENST00000518825 NPM2Q86SE8 214 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-210ENST00000518825 LMTK2Q8IWU2 1503 aa11.14□□□□□ -0.63
CTNNA1-210ENST00000518825 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-210ENST00000518825 FRMPD1Q5SYB0 1578 aa11.14□□□□□ -0.63
CTNNA1-210ENST00000518825 ADGRB3O60242 1522 aa11.13□□□□□ -0.63
CTNNA1-210ENST00000518825 APAF1O14727 1248 aa11.13□□□□□ -0.63
CTNNA1-210ENST00000518825 DEKP35659 375 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-210ENST00000518825 NOS1P29475 1434 aa11.13□□□□□ -0.63
CTNNA1-210ENST00000518825 MYT1LQ9UL68 1186 aa11.12□□□□□ -0.63
CTNNA1-210ENST00000518825 NPATQ14207 1427 aa11.11□□□□□ -0.63
CTNNA1-210ENST00000518825 ADGRB1O14514 1584 aa11.11□□□□□ -0.63
CTNNA1-210ENST00000518825 SHPRHQ149N8 1683 aa11.11□□□□□ -0.63
CTNNA1-210ENST00000518825 ZC3H13Q5T200 1668 aaKnown RBP11.11□□□□□ -0.63
CTNNA1-210ENST00000518825 BCAR3O75815 825 aa11.11□□□□□ -0.63
CTNNA1-210ENST00000518825 SBNO2Q9Y2G9 1366 aa11.11□□□□□ -0.63
CTNNA1-210ENST00000518825 PPLO60437 1756 aa11.1□□□□□ -0.63
CTNNA1-210ENST00000518825 CFAP65Q6ZU64 1925 aaKnown RBP11.1□□□□□ -0.63
CTNNA1-210ENST00000518825 SETBP1Q9Y6X0 1596 aa11.1□□□□□ -0.63
CTNNA1-210ENST00000518825 ZNF518AQ6AHZ1 1483 aa11.1□□□□□ -0.63
CTNNA1-210ENST00000518825 NKTRP30414 1462 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-210ENST00000518825 TMEM132EQ6IEE7 984 aa11.08□□□□□ -0.64
CTNNA1-210ENST00000518825 SLC12A5Q9H2X9 1139 aa11.08□□□□□ -0.64
CTNNA1-210ENST00000518825 TRAK1Q9UPV9 953 aa11.08□□□□□ -0.64
CTNNA1-210ENST00000518825 SIGLEC1Q9BZZ2 1709 aa11.08□□□□□ -0.64
CTNNA1-210ENST00000518825 QRICH2Q9H0J4 1663 aa11.08□□□□□ -0.64
CTNNA1-210ENST00000518825 C14orf93Q9H972 538 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-210ENST00000518825 CENPQQ7L2Z9 268 aaPredicted RBP11.07□□□□□ -0.64
CTNNA1-210ENST00000518825 CENPJQ9HC77 1338 aaPredicted RBP11.07□□□□□ -0.64
CTNNA1-210ENST00000518825 POLR3AO14802 1390 aaPredicted RBP11.07□□□□□ -0.64
CTNNA1-210ENST00000518825 C8orf34Q49A92 452 aa11.07□□□□□ -0.64
CTNNA1-210ENST00000518825 POGZQ7Z3K3 1410 aa11.07□□□□□ -0.64
CTNNA1-210ENST00000518825 NSD3Q9BZ95 1437 aa11.07□□□□□ -0.64
CTNNA1-210ENST00000518825 WWC1Q8IX03 1113 aa11.06□□□□□ -0.64
CTNNA1-210ENST00000518825 MLH3Q9UHC1 1453 aa11.05□□□□□ -0.64
CTNNA1-210ENST00000518825 HECW2Q9P2P5 1572 aa11.05□□□□□ -0.64
CTNNA1-210ENST00000518825 CHGAP10645 457 aaKnown RBP11.05□□□□□ -0.64
CTNNA1-210ENST00000518825 ABCC3O15438 1527 aa11.05□□□□□ -0.64
CTNNA1-210ENST00000518825 E9PSI1 815 aa11.05□□□□□ -0.64
CTNNA1-210ENST00000518825 GGT6Q6P531 493 aa11.05□□□□□ -0.64
CTNNA1-210ENST00000518825 IQSEC2Q5JU85 1478 aa11.05□□□□□ -0.64
CTNNA1-210ENST00000518825 IGHDP01880 384 aa11.04□□□□□ -0.64
CTNNA1-210ENST00000518825 TNNT2P45379 298 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-210ENST00000518825 LAS1LQ9Y4W2 734 aaKnown RBP11.04□□□□□ -0.64
CTNNA1-210ENST00000518825 CD109Q6YHK3 1445 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms