RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 PRKD2Q9BZL6 878 aa9.01□□□□□ -0.97
PABPC1-206ENST00000518293 COPS2P61201 443 aa9□□□□□ -0.97
PABPC1-206ENST00000518293 EIF4ENIF1Q9NRA8 985 aaKnown RBP9□□□□□ -0.97
PABPC1-206ENST00000518293 TULP1O00294 542 aaPredicted RBP8.99□□□□□ -0.97
PABPC1-206ENST00000518293 DNAJB2P25686 324 aa8.99□□□□□ -0.97
PABPC1-206ENST00000518293 GGCXP38435 758 aa8.99□□□□□ -0.97
PABPC1-206ENST00000518293 LMOD2Q6P5Q4 547 aa8.99□□□□□ -0.97
PABPC1-206ENST00000518293 GFRA3O60609 400 aa8.97□□□□□ -0.97
PABPC1-206ENST00000518293 NKX2-3Q8TAU0 364 aa8.97□□□□□ -0.97
PABPC1-206ENST00000518293 PCDHB3Q9Y5E6 796 aa8.97□□□□□ -0.97
PABPC1-206ENST00000518293 ADGRG1Q9Y653 693 aa8.97□□□□□ -0.97
PABPC1-206ENST00000518293 V9GY48 417 aaPredicted RBP8.97□□□□□ -0.97
PABPC1-206ENST00000518293 ZPR1O75312 459 aa8.96□□□□□ -0.98
PABPC1-206ENST00000518293 TMEM134Q9H6X4 195 aa8.96□□□□□ -0.98
PABPC1-206ENST00000518293 FCHSD2O94868 740 aa8.95□□□□□ -0.98
PABPC1-206ENST00000518293 GPR37O15354 613 aa8.94□□□□□ -0.98
PABPC1-206ENST00000518293 RCCD1A6NED2 376 aa8.93□□□□□ -0.98
PABPC1-206ENST00000518293 FAM161AQ3B820 660 aa8.93□□□□□ -0.98
PABPC1-206ENST00000518293 KMT5BQ4FZB7 885 aa8.93□□□□□ -0.98
PABPC1-206ENST00000518293 GPIHBP1Q8IV16 184 aa8.93□□□□□ -0.98
PABPC1-206ENST00000518293 BLOC1S3Q6QNY0 202 aa8.92□□□□□ -0.98
PABPC1-206ENST00000518293 TMUB1Q9BVT8 246 aa8.92□□□□□ -0.98
PABPC1-206ENST00000518293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.9□□□□□ -0.98
PABPC1-206ENST00000518293 NRG2O14511 850 aaPredicted RBP8.9□□□□□ -0.98
PABPC1-206ENST00000518293 ZC3H15Q8WU90 426 aaKnown RBP8.9□□□□□ -0.98
PABPC1-206ENST00000518293 ACTN4O43707 911 aaKnown RBP8.89□□□□□ -0.99
PABPC1-206ENST00000518293 OATP04181 439 aa8.89□□□□□ -0.99
PABPC1-206ENST00000518293 CFHP08603 1231 aa8.89□□□□□ -0.99
PABPC1-206ENST00000518293 FECHP22830 423 aa8.88□□□□□ -0.99
PABPC1-206ENST00000518293 HIC1Q14526 733 aa8.88□□□□□ -0.99
PABPC1-206ENST00000518293 TRAF7Q6Q0C0 670 aa8.88□□□□□ -0.99
PABPC1-206ENST00000518293 GNPATO15228 680 aa8.86□□□□□ -0.99
PABPC1-206ENST00000518293 TLL1O43897 1013 aa8.86□□□□□ -0.99
PABPC1-206ENST00000518293 PXYLP1Q8TE99 480 aa8.86□□□□□ -0.99
PABPC1-206ENST00000518293 PDZRN3Q9UPQ7 1066 aa8.86□□□□□ -0.99
PABPC1-206ENST00000518293 RNF223E7ERA6 249 aa8.85□□□□□ -0.99
PABPC1-206ENST00000518293 SLC10A3P09131 477 aa8.85□□□□□ -0.99
PABPC1-206ENST00000518293 RSPH4AQ5TD94 716 aa8.85□□□□□ -0.99
PABPC1-206ENST00000518293 NR1I2O75469 434 aa8.84□□□□□ -0.99
PABPC1-206ENST00000518293 ZMYND10O75800 440 aa8.84□□□□□ -0.99
PABPC1-206ENST00000518293 METTL3Q86U44 580 aaKnown RBP8.84□□□□□ -0.99
PABPC1-206ENST00000518293 SLC19A1P41440 591 aa8.83□□□□□ -1
PABPC1-206ENST00000518293 LCE2BO14633 110 aa8.82□□□□□ -1
PABPC1-206ENST00000518293 BARGINQ6ZT62 677 aa8.82□□□□□ -1
PABPC1-206ENST00000518293 ANKLE1Q8NAG6 615 aa8.82□□□□□ -1
PABPC1-206ENST00000518293 S1PR4O95977 384 aa8.81□□□□□ -1
PABPC1-206ENST00000518293 ADH1BP00325 375 aa8.81□□□□□ -1
PABPC1-206ENST00000518293 PPEF1O14829 653 aaPredicted RBP8.79□□□□□ -1
PABPC1-206ENST00000518293 TPRNQ4KMQ1 711 aa8.79□□□□□ -1
PABPC1-206ENST00000518293 SPRYD7Q5W111 196 aa8.78□□□□□ -1
PABPC1-206ENST00000518293 SCUBE3Q8IX30 993 aa8.78□□□□□ -1
PABPC1-206ENST00000518293 RDH13Q8NBN7 331 aa8.78□□□□□ -1
PABPC1-206ENST00000518293 SLC6A16Q9GZN6 736 aa8.78□□□□□ -1
PABPC1-206ENST00000518293 MINK1Q8N4C8 1332 aaPredicted RBP8.78□□□□□ -1
PABPC1-206ENST00000518293 IRF6O14896 467 aa8.77□□□□□ -1.01
PABPC1-206ENST00000518293 MAP2K5Q13163 448 aa8.77□□□□□ -1.01
PABPC1-206ENST00000518293 PUS10Q3MIT2 529 aaKnown RBP8.77□□□□□ -1.01
PABPC1-206ENST00000518293 ZNF598Q86UK7 904 aaKnown RBP8.77□□□□□ -1.01
PABPC1-206ENST00000518293 DAXXQ9UER7 740 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-206ENST00000518293 PRKCSHP14314 528 aaPredicted RBP8.76□□□□□ -1.01
PABPC1-206ENST00000518293 KRI1Q8N9T8 703 aaKnown RBP8.76□□□□□ -1.01
PABPC1-206ENST00000518293 EMID1Q96A84 441 aaPredicted RBP8.76□□□□□ -1.01
PABPC1-206ENST00000518293 DDX11L8A8MPP1 907 aa8.75□□□□□ -1.01
PABPC1-206ENST00000518293 TRIM67Q6ZTA4 783 aa8.75□□□□□ -1.01
PABPC1-206ENST00000518293 SPSB2Q99619 263 aa8.75□□□□□ -1.01
PABPC1-206ENST00000518293 ZNF697Q5TEC3 545 aa8.74□□□□□ -1.01
PABPC1-206ENST00000518293 LIAT1Q6ZQX7 453 aa8.74□□□□□ -1.01
PABPC1-206ENST00000518293 PKDCCQ504Y2 493 aa8.73□□□□□ -1.01
PABPC1-206ENST00000518293 SULF1Q8IWU6 871 aa8.73□□□□□ -1.01
PABPC1-206ENST00000518293 CCDC102AQ96A19 550 aa8.73□□□□□ -1.01
PABPC1-206ENST00000518293 PHOX2BQ99453 314 aa8.73□□□□□ -1.01
PABPC1-206ENST00000518293 SLC24A3Q9HC58 644 aa8.73□□□□□ -1.01
PABPC1-206ENST00000518293 PRR20EP86478 221 aa8.72□□□□□ -1.01
PABPC1-206ENST00000518293 PRR20CP86479 221 aa8.72□□□□□ -1.01
PABPC1-206ENST00000518293 PRR20DP86480 221 aa8.72□□□□□ -1.01
PABPC1-206ENST00000518293 PRR20BP86481 221 aa8.72□□□□□ -1.01
PABPC1-206ENST00000518293 PRR20AP86496 221 aa8.72□□□□□ -1.01
PABPC1-206ENST00000518293 NLRP7Q8WX94 980 aa8.72□□□□□ -1.01
PABPC1-206ENST00000518293 FUT2Q10981 343 aa8.71□□□□□ -1.02
PABPC1-206ENST00000518293 ZNF787Q6DD87 383 aa8.71□□□□□ -1.02
PABPC1-206ENST00000518293 ATP6V1AP38606 617 aa8.7□□□□□ -1.02
PABPC1-206ENST00000518293 MORN1Q5T089 497 aa8.7□□□□□ -1.02
PABPC1-206ENST00000518293 AK7Q96M32 723 aa8.7□□□□□ -1.02
PABPC1-206ENST00000518293 TNFRSF10AO00220 468 aa8.69□□□□□ -1.02
PABPC1-206ENST00000518293 DGAT1O75907 488 aa8.69□□□□□ -1.02
PABPC1-206ENST00000518293 GCGRP47871 477 aa8.69□□□□□ -1.02
PABPC1-206ENST00000518293 PLA2G2CQ5R387 149 aa8.69□□□□□ -1.02
PABPC1-206ENST00000518293 FMNL1O95466 1100 aaPredicted RBP8.68□□□□□ -1.02
PABPC1-206ENST00000518293 FAM187AA6NFU0 413 aa8.67□□□□□ -1.02
PABPC1-206ENST00000518293 TRIM66O15016 1216 aa8.67□□□□□ -1.02
PABPC1-206ENST00000518293 GDF9O60383 454 aa8.67□□□□□ -1.02
PABPC1-206ENST00000518293 GRIPAP1Q4V328 841 aa8.67□□□□□ -1.02
PABPC1-206ENST00000518293 SLC27A5Q9Y2P5 690 aa8.67□□□□□ -1.02
PABPC1-206ENST00000518293 THAP11Q96EK4 314 aa8.66□□□□□ -1.02
PABPC1-206ENST00000518293 MYT1Q01538 1121 aa8.65□□□□□ -1.02
PABPC1-206ENST00000518293 FCF1Q9Y324 198 aaKnown RBP8.65□□□□□ -1.02
PABPC1-206ENST00000518293 RPIAP49247 311 aa8.64□□□□□ -1.03
PABPC1-206ENST00000518293 FOXC1Q12948 553 aa8.64□□□□□ -1.03
PABPC1-206ENST00000518293 SALL2Q9Y467 1007 aaPredicted RBP8.64□□□□□ -1.03
PABPC1-206ENST00000518293 CD2BP2O95400 341 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms