RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 LMOD2Q6P5Q4 547 aa10.7□□□□□ -0.7
CPS1-210ENST00000518043 ZNF710Q8N1W2 664 aa10.69□□□□□ -0.7
CPS1-210ENST00000518043 ZSWIM6Q9HCJ5 1215 aa10.69□□□□□ -0.7
CPS1-210ENST00000518043 PTGER2P43116 358 aa10.68□□□□□ -0.7
CPS1-210ENST00000518043 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
CPS1-210ENST00000518043 ANO8Q9HCE9 1232 aaPredicted RBP10.68□□□□□ -0.7
CPS1-210ENST00000518043 KIF14Q15058 1648 aa10.68□□□□□ -0.7
CPS1-210ENST00000518043 GRXCR2A6NFK2 248 aa10.67□□□□□ -0.7
CPS1-210ENST00000518043 ARID3CA6NKF2 412 aa10.67□□□□□ -0.7
CPS1-210ENST00000518043 ARSIQ5FYB1 569 aa10.67□□□□□ -0.7
CPS1-210ENST00000518043 SUPT6HQ7KZ85 1726 aaKnown RBP10.67□□□□□ -0.7
CPS1-210ENST00000518043 GPR153Q6NV75 609 aa10.66□□□□□ -0.7
CPS1-210ENST00000518043 KHSRPQ92945 711 aaKnown RBP eCLIP10.66□□□□□ -0.76e-8■■■■■ 28.3
CPS1-210ENST00000518043 NCOA2Q15596 1464 aa10.66□□□□□ -0.7
CPS1-210ENST00000518043 TROQ12816 1431 aaPredicted RBP10.66□□□□□ -0.7
CPS1-210ENST00000518043 PHLDB1Q86UU1 1377 aa10.65□□□□□ -0.7
CPS1-210ENST00000518043 KDM4FA0A1W2PPD8 638 aa10.65□□□□□ -0.7
CPS1-210ENST00000518043 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.7
CPS1-210ENST00000518043 DDX12PQ92771 950 aa10.65□□□□□ -0.7
CPS1-210ENST00000518043 ATP1B4Q9UN42 357 aaPredicted RBP10.65□□□□□ -0.7
CPS1-210ENST00000518043 ABCC10Q5T3U5 1492 aa10.64□□□□□ -0.71
CPS1-210ENST00000518043 NUDT7P0C024 238 aa10.64□□□□□ -0.71
CPS1-210ENST00000518043 RRBP1Q9P2E9 1410 aaKnown RBP10.63□□□□□ -0.71
CPS1-210ENST00000518043 MTUS2Q5JR59 1369 aa10.63□□□□□ -0.71
CPS1-210ENST00000518043 RBM26Q5T8P6 1007 aaKnown RBP10.62□□□□□ -0.71
CPS1-210ENST00000518043 TTC37Q6PGP7 1564 aa10.61□□□□□ -0.71
CPS1-210ENST00000518043 OSBPP22059 807 aa10.61□□□□□ -0.71
CPS1-210ENST00000518043 CDC42BPAQ5VT25 1732 aa10.61□□□□□ -0.71
CPS1-210ENST00000518043 MYOM3Q5VTT5 1437 aa10.59□□□□□ -0.71
CPS1-210ENST00000518043 HOXB1P14653 301 aaPredicted RBP10.59□□□□□ -0.71
CPS1-210ENST00000518043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.58□□□□□ -0.72
CPS1-210ENST00000518043 WDR7Q9Y4E6 1490 aa10.58□□□□□ -0.72
CPS1-210ENST00000518043 PHF14O94880 888 aa10.58□□□□□ -0.72
CPS1-210ENST00000518043 MAPKBP1O60336 1514 aa10.58□□□□□ -0.72
CPS1-210ENST00000518043 FGD6Q6ZV73 1430 aa10.58□□□□□ -0.72
CPS1-210ENST00000518043 ITSN2Q9NZM3 1697 aa10.57□□□□□ -0.72
CPS1-210ENST00000518043 TCOF1Q13428 1488 aaKnown RBP10.57□□□□□ -0.72
CPS1-210ENST00000518043 TRIM26Q12899 539 aaPredicted RBP10.57□□□□□ -0.72
CPS1-210ENST00000518043 CDC42BPBQ9Y5S2 1711 aa10.57□□□□□ -0.72
CPS1-210ENST00000518043 PREX2Q70Z35 1606 aa10.57□□□□□ -0.72
CPS1-210ENST00000518043 GPATCH8Q9UKJ3 1502 aaKnown RBP10.57□□□□□ -0.72
CPS1-210ENST00000518043 ASXL2Q76L83 1435 aa10.57□□□□□ -0.72
CPS1-210ENST00000518043 ABCA9Q8IUA7 1624 aa10.56□□□□□ -0.72
CPS1-210ENST00000518043 GPIHBP1Q8IV16 184 aa10.56□□□□□ -0.72
CPS1-210ENST00000518043 EPAS1Q99814 870 aa10.56□□□□□ -0.72
CPS1-210ENST00000518043 PCDHGA10Q9Y5H3 936 aa10.56□□□□□ -0.72
CPS1-210ENST00000518043 PTPN23Q9H3S7 1636 aa10.55□□□□□ -0.72
CPS1-210ENST00000518043 PRIM1P49642 420 aaKnown RBP10.55□□□□□ -0.72
CPS1-210ENST00000518043 ZC3H15Q8WU90 426 aaKnown RBP10.55□□□□□ -0.72
CPS1-210ENST00000518043 LHX6Q9UPM6 363 aa10.55□□□□□ -0.72
CPS1-210ENST00000518043 CCNB3Q8WWL7 1395 aa10.54□□□□□ -0.72
CPS1-210ENST00000518043 FOSBP53539 338 aa10.54□□□□□ -0.72
CPS1-210ENST00000518043 CYB5RLQ6IPT4 315 aa10.54□□□□□ -0.72
CPS1-210ENST00000518043 TYW1BQ6NUM6 668 aa10.54□□□□□ -0.72
CPS1-210ENST00000518043 ZNF454Q8N9F8 522 aa10.54□□□□□ -0.72
CPS1-210ENST00000518043 MYO5CQ9NQX4 1742 aa10.54□□□□□ -0.72
CPS1-210ENST00000518043 CDK11AQ9UQ88 783 aaPredicted RBP10.54□□□□□ -0.72
CPS1-210ENST00000518043 PLEKHD1A6NEE1 506 aa10.53□□□□□ -0.72
CPS1-210ENST00000518043 EN1Q05925 392 aaPredicted RBP10.53□□□□□ -0.72
CPS1-210ENST00000518043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.52□□□□□ -0.72
CPS1-210ENST00000518043 MIA2Q96PC5 1412 aa10.52□□□□□ -0.73
CPS1-210ENST00000518043 NUTM2FA1L443 756 aa10.52□□□□□ -0.73
CPS1-210ENST00000518043 ST18O60284 1047 aa10.52□□□□□ -0.73
CPS1-210ENST00000518043 FBXW7Q969H0 707 aa10.52□□□□□ -0.73
CPS1-210ENST00000518043 SAMD9LQ8IVG5 1584 aa10.52□□□□□ -0.73
CPS1-210ENST00000518043 RBM33Q96EV2 1170 aaKnown RBP10.51□□□□□ -0.73
CPS1-210ENST00000518043 PCGF6Q9BYE7 350 aa10.51□□□□□ -0.73
CPS1-210ENST00000518043 ARAP3Q8WWN8 1544 aa10.51□□□□□ -0.73
CPS1-210ENST00000518043 DIP2BQ9P265 1576 aa10.51□□□□□ -0.73
CPS1-210ENST00000518043 CAMSAP2Q08AD1 1489 aa10.5□□□□□ -0.73
CPS1-210ENST00000518043 PSDA5PKW4 1024 aaPredicted RBP10.5□□□□□ -0.73
CPS1-210ENST00000518043 MAP3K7O43318 606 aa10.5□□□□□ -0.73
CPS1-210ENST00000518043 ZDHHC16Q969W1 377 aa10.5□□□□□ -0.73
CPS1-210ENST00000518043 GLI2P10070 1586 aa10.5□□□□□ -0.73
CPS1-210ENST00000518043 PTPRKQ15262 1439 aa10.5□□□□□ -0.73
CPS1-210ENST00000518043 DNMT1P26358 1616 aaKnown RBP10.49□□□□□ -0.73
CPS1-210ENST00000518043 MAP3K4Q9Y6R4 1608 aa10.49□□□□□ -0.73
CPS1-210ENST00000518043 CROCC2H7BZ55 1655 aa10.49□□□□□ -0.73
CPS1-210ENST00000518043 KIF13AQ9H1H9 1805 aa10.49□□□□□ -0.73
CPS1-210ENST00000518043 ZMYND10O75800 440 aa10.48□□□□□ -0.73
CPS1-210ENST00000518043 FAM163AQ96GL9 167 aaPredicted RBP10.48□□□□□ -0.73
CPS1-210ENST00000518043 PPRC1Q5VV67 1664 aaKnown RBP10.47□□□□□ -0.73
CPS1-210ENST00000518043 GPR37O15354 613 aa10.47□□□□□ -0.73
CPS1-210ENST00000518043 TSR1Q2NL82 804 aaKnown RBP10.47□□□□□ -0.73
CPS1-210ENST00000518043 PPP4R3BQ5MIZ7 849 aa10.47□□□□□ -0.73
CPS1-210ENST00000518043 ZNF644Q9H582 1327 aaPredicted RBP10.47□□□□□ -0.73
CPS1-210ENST00000518043 PLCH2O75038 1416 aa10.47□□□□□ -0.73
CPS1-210ENST00000518043 ADAM33Q9BZ11 813 aa10.46□□□□□ -0.73
CPS1-210ENST00000518043 CDHR5Q9HBB8 845 aa10.46□□□□□ -0.73
CPS1-210ENST00000518043 MBD5Q9P267 1494 aa10.46□□□□□ -0.74
CPS1-210ENST00000518043 ABCC1P33527 1531 aa10.46□□□□□ -0.74
CPS1-210ENST00000518043 ARHGEF12Q9NZN5 1544 aa10.46□□□□□ -0.74
CPS1-210ENST00000518043 ARHGEF5Q12774 1597 aa10.45□□□□□ -0.74
CPS1-210ENST00000518043 ARHGAP5Q13017 1502 aa10.45□□□□□ -0.74
CPS1-210ENST00000518043 FCHSD2O94868 740 aa10.45□□□□□ -0.74
CPS1-210ENST00000518043 KCNH8Q96L42 1107 aa10.45□□□□□ -0.74
CPS1-210ENST00000518043 SYCP2Q9BX26 1530 aa10.44□□□□□ -0.74
CPS1-210ENST00000518043 ABCC5O15440 1437 aa10.44□□□□□ -0.74
CPS1-210ENST00000518043 ERBB3P21860 1342 aa10.44□□□□□ -0.74
CPS1-210ENST00000518043 PTGDRQ13258 359 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms