RNA–Protein interactions for RNA: ENST00000517935.1

CDH12P3-201, Transcript of cadherin 12 pseudogene 3, humanhuman

BASIC

Gene CDH12P3, Length 295 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P3-201ENST00000517935 PITPNM1O00562 1244 aa8.58□□□□□ -1.04
CDH12P3-201ENST00000517935 KCNA6P17658 529 aa8.58□□□□□ -1.04
CDH12P3-201ENST00000517935 PROSER2Q86WR7 435 aaPredicted RBP8.58□□□□□ -1.04
CDH12P3-201ENST00000517935 PREX2Q70Z35 1606 aa8.58□□□□□ -1.04
CDH12P3-201ENST00000517935 PRDM15P57071 1507 aaPredicted RBP8.56□□□□□ -1.04
CDH12P3-201ENST00000517935 AHDC1Q5TGY3 1603 aaPredicted RBP8.56□□□□□ -1.04
CDH12P3-201ENST00000517935 SENP3-EIF4A1A0A087X0R7 540 aa8.56□□□□□ -1.04
CDH12P3-201ENST00000517935 INO80Q9ULG1 1556 aaPredicted RBP8.56□□□□□ -1.04
CDH12P3-201ENST00000517935 FBXO3Q9UK99 471 aa8.55□□□□□ -1.04
CDH12P3-201ENST00000517935 NKTRP30414 1462 aaKnown RBP8.55□□□□□ -1.04
CDH12P3-201ENST00000517935 TIAM1Q13009 1591 aa8.55□□□□□ -1.04
CDH12P3-201ENST00000517935 WASHC2CQ9Y4E1 1318 aa8.54□□□□□ -1.04
CDH12P3-201ENST00000517935 ADGBQ8N7X0 1667 aa8.54□□□□□ -1.04
CDH12P3-201ENST00000517935 ARHGAP23Q9P227 1491 aa8.54□□□□□ -1.04
CDH12P3-201ENST00000517935 HRCP23327 699 aa8.54□□□□□ -1.04
CDH12P3-201ENST00000517935 TXNDC2Q86VQ3 553 aa8.54□□□□□ -1.04
CDH12P3-201ENST00000517935 EID1Q9Y6B2 187 aa8.54□□□□□ -1.04
CDH12P3-201ENST00000517935 SLIT1O75093 1534 aa8.54□□□□□ -1.04
CDH12P3-201ENST00000517935 BLMP54132 1417 aaPredicted RBP8.54□□□□□ -1.04
CDH12P3-201ENST00000517935 KIAA1107Q9UPP5 1409 aa8.54□□□□□ -1.04
CDH12P3-201ENST00000517935 LTKP29376 864 aa8.53□□□□□ -1.04
CDH12P3-201ENST00000517935 PRR29P0C7W0 189 aa8.52□□□□□ -1.05
CDH12P3-201ENST00000517935 CHRDL2Q6WN34 429 aa8.52□□□□□ -1.05
CDH12P3-201ENST00000517935 C8orf37Q96NL8 207 aa8.52□□□□□ -1.05
CDH12P3-201ENST00000517935 DHX29Q7Z478 1369 aaKnown RBP8.51□□□□□ -1.05
CDH12P3-201ENST00000517935 TRPC5Q9UL62 973 aaPredicted RBP8.51□□□□□ -1.05
CDH12P3-201ENST00000517935 NCOA3Q9Y6Q9 1424 aa8.51□□□□□ -1.05
CDH12P3-201ENST00000517935 DIP2AQ14689 1571 aa8.51□□□□□ -1.05
CDH12P3-201ENST00000517935 BCL9LQ86UU0 1499 aa8.51□□□□□ -1.05
CDH12P3-201ENST00000517935 PLEKHH2Q8IVE3 1493 aa8.51□□□□□ -1.05
CDH12P3-201ENST00000517935 SYCP2Q9BX26 1530 aa8.5□□□□□ -1.05
CDH12P3-201ENST00000517935 NCOA2Q15596 1464 aa8.5□□□□□ -1.05
CDH12P3-201ENST00000517935 UBR1Q8IWV7 1749 aa8.49□□□□□ -1.05
CDH12P3-201ENST00000517935 RTEL1-TNFRSF6BF6WH68 1400 aa8.49□□□□□ -1.05
CDH12P3-201ENST00000517935 FMN1Q68DA7 1419 aa8.49□□□□□ -1.05
CDH12P3-201ENST00000517935 SETD5Q9C0A6 1442 aa8.49□□□□□ -1.05
CDH12P3-201ENST00000517935 HNRNPMP52272 730 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDH12P3-201ENST00000517935 C1QTNF8P60827 252 aa8.49□□□□□ -1.05
CDH12P3-201ENST00000517935 SF3B2Q13435 895 aaKnown RBP8.48□□□□□ -1.05
CDH12P3-201ENST00000517935 CADPS2Q86UW7 1296 aa8.48□□□□□ -1.05
CDH12P3-201ENST00000517935 LRRC59Q96AG4 307 aaKnown RBP8.48□□□□□ -1.05
CDH12P3-201ENST00000517935 KDM5AP29375 1690 aaKnown RBP8.48□□□□□ -1.05
CDH12P3-201ENST00000517935 KIF3BO15066 747 aa8.47□□□□□ -1.05
CDH12P3-201ENST00000517935 RANGAP1P46060 587 aaPredicted RBP8.47□□□□□ -1.05
CDH12P3-201ENST00000517935 ATP1B4Q9UN42 357 aaPredicted RBP8.47□□□□□ -1.05
CDH12P3-201ENST00000517935 CDC42BPAQ5VT25 1732 aa8.46□□□□□ -1.05
CDH12P3-201ENST00000517935 DEFB132Q7Z7B7 95 aa8.46□□□□□ -1.06
CDH12P3-201ENST00000517935 FNBP4Q8N3X1 1017 aaPredicted RBP8.46□□□□□ -1.06
CDH12P3-201ENST00000517935 ZNF784Q8NCA9 323 aaPredicted RBP8.46□□□□□ -1.06
CDH12P3-201ENST00000517935 USP21Q9UK80 565 aa8.46□□□□□ -1.06
CDH12P3-201ENST00000517935 ZNF777Q9ULD5 760 aaPredicted RBP8.46□□□□□ -1.06
CDH12P3-201ENST00000517935 TET3O43151 1660 aa8.46□□□□□ -1.06
CDH12P3-201ENST00000517935 TMEM2Q9UHN6 1383 aa8.46□□□□□ -1.06
CDH12P3-201ENST00000517935 ATRNO75882 1429 aa8.46□□□□□ -1.06
CDH12P3-201ENST00000517935 CAMSAP2Q08AD1 1489 aa8.45□□□□□ -1.06
CDH12P3-201ENST00000517935 MROH1Q8NDA8 1641 aa8.45□□□□□ -1.06
CDH12P3-201ENST00000517935 PSDA5PKW4 1024 aaPredicted RBP8.45□□□□□ -1.06
CDH12P3-201ENST00000517935 ERVK-7P63135 1459 aa8.45□□□□□ -1.06
CDH12P3-201ENST00000517935 UNC13BO14795 1591 aa8.44□□□□□ -1.06
CDH12P3-201ENST00000517935 ATF3P18847 181 aa8.44□□□□□ -1.06
CDH12P3-201ENST00000517935 C19orf44Q9H6X5 657 aa8.44□□□□□ -1.06
CDH12P3-201ENST00000517935 BRINP3Q76B58 766 aa8.43□□□□□ -1.06
CDH12P3-201ENST00000517935 SLC26A8Q96RN1 970 aa8.43□□□□□ -1.06
CDH12P3-201ENST00000517935 FXR2P51116 673 aaKnown RBP eCLIP8.42□□□□□ -1.06
CDH12P3-201ENST00000517935 MIER1Q8N108 512 aa8.42□□□□□ -1.06
CDH12P3-201ENST00000517935 PNPLA6Q8IY17 1366 aa8.42□□□□□ -1.06
CDH12P3-201ENST00000517935 GPATCH8Q9UKJ3 1502 aaKnown RBP8.42□□□□□ -1.06
CDH12P3-201ENST00000517935 ARHGAP35Q9NRY4 1499 aa8.41□□□□□ -1.06
CDH12P3-201ENST00000517935 PLEKHG5O94827 1062 aa8.41□□□□□ -1.06
CDH12P3-201ENST00000517935 PLCD3Q8N3E9 789 aa8.41□□□□□ -1.06
CDH12P3-201ENST00000517935 UTRNP46939 3433 aa8.41□□□□□ -1.06
CDH12P3-201ENST00000517935 SPHKAPQ2M3C7 1700 aa8.4□□□□□ -1.06
CDH12P3-201ENST00000517935 PTCH1Q13635 1447 aa8.4□□□□□ -1.06
CDH12P3-201ENST00000517935 ADAMTS2O95450 1211 aa8.4□□□□□ -1.06
CDH12P3-201ENST00000517935 PIP4P2Q8N4L2 257 aa8.4□□□□□ -1.06
CDH12P3-201ENST00000517935 PCDH10Q9P2E7 1040 aa8.4□□□□□ -1.06
CDH12P3-201ENST00000517935 CFDP1Q9UEE9 299 aaPredicted RBP8.4□□□□□ -1.06
CDH12P3-201ENST00000517935 MAST1Q9Y2H9 1570 aa8.39□□□□□ -1.07
CDH12P3-201ENST00000517935 SLC34A2O95436 690 aa8.39□□□□□ -1.07
CDH12P3-201ENST00000517935 PRKAR2AP13861 404 aaKnown RBP8.39□□□□□ -1.07
CDH12P3-201ENST00000517935 BAG6P46379 1132 aa8.39□□□□□ -1.07
CDH12P3-201ENST00000517935 VASPP50552 380 aaPredicted RBP8.39□□□□□ -1.07
CDH12P3-201ENST00000517935 C14orf37Q86TY3 774 aa8.39□□□□□ -1.07
CDH12P3-201ENST00000517935 GJD4Q96KN9 370 aaPredicted RBP8.39□□□□□ -1.07
CDH12P3-201ENST00000517935 ASXL1Q8IXJ9 1541 aa8.39□□□□□ -1.07
CDH12P3-201ENST00000517935 NINLQ9Y2I6 1382 aa8.38□□□□□ -1.07
CDH12P3-201ENST00000517935 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.38□□□□□ -1.07
CDH12P3-201ENST00000517935 CCDC18Q5T9S5 1454 aa8.38□□□□□ -1.07
CDH12P3-201ENST00000517935 DCCP43146 1447 aa8.37□□□□□ -1.07
CDH12P3-201ENST00000517935 R3HDM1Q15032 1099 aaKnown RBP8.37□□□□□ -1.07
CDH12P3-201ENST00000517935 MBD5Q9P267 1494 aa8.37□□□□□ -1.07
CDH12P3-201ENST00000517935 CHD2O14647 1828 aaKnown RBP8.36□□□□□ -1.07
CDH12P3-201ENST00000517935 EFCAB6Q5THR3 1501 aa8.36□□□□□ -1.07
CDH12P3-201ENST00000517935 CHADLQ6NUI6 762 aa8.36□□□□□ -1.07
CDH12P3-201ENST00000517935 CREBZFQ9NS37 354 aa8.36□□□□□ -1.07
CDH12P3-201ENST00000517935 RALGAPBQ86X10 1494 aa8.36□□□□□ -1.07
CDH12P3-201ENST00000517935 ARHGAP31Q2M1Z3 1444 aa8.36□□□□□ -1.07
CDH12P3-201ENST00000517935 LRRIQ1Q96JM4 1722 aa8.35□□□□□ -1.07
CDH12P3-201ENST00000517935 PPP1R15AO75807 674 aaPredicted RBP8.34□□□□□ -1.07
CDH12P3-201ENST00000517935 RSPH4AQ5TD94 716 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms