RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 ANKRD50Q9ULJ7 1429 aa11.22□□□□□ -0.61
TNFRSF11B-202ENST00000517352 CFAP65Q6ZU64 1925 aaKnown RBP11.21□□□□□ -0.61
TNFRSF11B-202ENST00000517352 SYNMO15061 1565 aa11.21□□□□□ -0.61
TNFRSF11B-202ENST00000517352 SLIT1O75093 1534 aa11.21□□□□□ -0.61
TNFRSF11B-202ENST00000517352 PRDM15P57071 1507 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF11B-202ENST00000517352 ZNF326Q5BKZ1 582 aaKnown RBP11.21□□□□□ -0.61
TNFRSF11B-202ENST00000517352 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF11B-202ENST00000517352 SLAIN2Q9P270 581 aa11.21□□□□□ -0.61
TNFRSF11B-202ENST00000517352 ARHGAP23Q9P227 1491 aa11.2□□□□□ -0.62
TNFRSF11B-202ENST00000517352 UBR1Q8IWV7 1749 aa11.2□□□□□ -0.62
TNFRSF11B-202ENST00000517352 MROH1Q8NDA8 1641 aa11.2□□□□□ -0.62
TNFRSF11B-202ENST00000517352 NCBP3Q53F19 620 aaKnown RBP11.19□□□□□ -0.62
TNFRSF11B-202ENST00000517352 FAM135BQ49AJ0 1406 aa11.18□□□□□ -0.62
TNFRSF11B-202ENST00000517352 PPARGC1BQ86YN6 1023 aaKnown RBP11.18□□□□□ -0.62
TNFRSF11B-202ENST00000517352 PIK3C2BO00750 1634 aa11.17□□□□□ -0.62
TNFRSF11B-202ENST00000517352 CADPS2Q86UW7 1296 aa11.17□□□□□ -0.62
TNFRSF11B-202ENST00000517352 RIMS2Q9UQ26 1411 aa11.17□□□□□ -0.62
TNFRSF11B-202ENST00000517352 NUP155O75694 1391 aa11.16□□□□□ -0.62
TNFRSF11B-202ENST00000517352 LMTK2Q8IWU2 1503 aa11.16□□□□□ -0.62
TNFRSF11B-202ENST00000517352 TBX22Q9Y458 520 aa11.16□□□□□ -0.62
TNFRSF11B-202ENST00000517352 RPRD2Q5VT52 1461 aaKnown RBP11.15□□□□□ -0.62
TNFRSF11B-202ENST00000517352 C19orf44Q9H6X5 657 aa11.15□□□□□ -0.62
TNFRSF11B-202ENST00000517352 NOS1P29475 1434 aa11.15□□□□□ -0.62
TNFRSF11B-202ENST00000517352 PLEKHG1Q9ULL1 1385 aa11.15□□□□□ -0.63
TNFRSF11B-202ENST00000517352 CROCC2H7BZ55 1655 aa11.14□□□□□ -0.63
TNFRSF11B-202ENST00000517352 JCADQ9P266 1359 aa11.14□□□□□ -0.63
TNFRSF11B-202ENST00000517352 ADGRB3O60242 1522 aa11.14□□□□□ -0.63
TNFRSF11B-202ENST00000517352 ADGRL2O95490 1459 aa11.13□□□□□ -0.63
TNFRSF11B-202ENST00000517352 AMOTL2Q9Y2J4 779 aa11.13□□□□□ -0.63
TNFRSF11B-202ENST00000517352 NKTRP30414 1462 aaKnown RBP11.12□□□□□ -0.63
TNFRSF11B-202ENST00000517352 NUTM2BA6NNL0 878 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF11B-202ENST00000517352 NUTM2EB1AL46 878 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF11B-202ENST00000517352 ZNF772Q68DY9 489 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF11B-202ENST00000517352 NUTM2AQ8IVF1 878 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF11B-202ENST00000517352 TRIM52Q96A61 297 aa11.12□□□□□ -0.63
TNFRSF11B-202ENST00000517352 STRCP1A6NGW2 1772 aa11.11□□□□□ -0.63
TNFRSF11B-202ENST00000517352 POTEAQ6S8J7 498 aa11.11□□□□□ -0.63
TNFRSF11B-202ENST00000517352 RGS17Q9UGC6 210 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF11B-202ENST00000517352 SPATA31A6Q5VVP1 1343 aa11.09□□□□□ -0.63
TNFRSF11B-202ENST00000517352 ALKQ9UM73 1620 aa11.09□□□□□ -0.63
TNFRSF11B-202ENST00000517352 ROCK1Q13464 1354 aa11.09□□□□□ -0.63
TNFRSF11B-202ENST00000517352 NCOA3Q9Y6Q9 1424 aa11.08□□□□□ -0.64
TNFRSF11B-202ENST00000517352 TET3O43151 1660 aa11.08□□□□□ -0.64
TNFRSF11B-202ENST00000517352 KDM5AP29375 1690 aaKnown RBP11.08□□□□□ -0.64
TNFRSF11B-202ENST00000517352 PIK3R4Q99570 1358 aa11.07□□□□□ -0.64
TNFRSF11B-202ENST00000517352 ZFYVE9O95405 1425 aa11.07□□□□□ -0.64
TNFRSF11B-202ENST00000517352 ROBO1Q9Y6N7 1651 aa11.07□□□□□ -0.64
TNFRSF11B-202ENST00000517352 RXRBP28702 533 aa11.06□□□□□ -0.64
TNFRSF11B-202ENST00000517352 LRRC59Q96AG4 307 aaKnown RBP11.06□□□□□ -0.64
TNFRSF11B-202ENST00000517352 VGFO15240 615 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF11B-202ENST00000517352 BRINP3Q76B58 766 aa11.04□□□□□ -0.64
TNFRSF11B-202ENST00000517352 C8orf37Q96NL8 207 aa11.03□□□□□ -0.64
TNFRSF11B-202ENST00000517352 SLC4A1APQ9BWU0 796 aaKnown RBP11.03□□□□□ -0.64
TNFRSF11B-202ENST00000517352 PHLPP1O60346 1717 aa11.02□□□□□ -0.65
TNFRSF11B-202ENST00000517352 NGLY1Q96IV0 654 aa11.02□□□□□ -0.65
TNFRSF11B-202ENST00000517352 TRPM2O94759 1503 aa11.02□□□□□ -0.65
TNFRSF11B-202ENST00000517352 NWD1Q149M9 1564 aa11.02□□□□□ -0.65
TNFRSF11B-202ENST00000517352 ADAMTS2O95450 1211 aa11.01□□□□□ -0.65
TNFRSF11B-202ENST00000517352 TMEM131LA2VDJ0 1609 aa11.01□□□□□ -0.65
TNFRSF11B-202ENST00000517352 GCC2Q8IWJ2 1684 aa11.01□□□□□ -0.65
TNFRSF11B-202ENST00000517352 ADAMTS13Q76LX8 1427 aa11.01□□□□□ -0.65
TNFRSF11B-202ENST00000517352 DIP2AQ14689 1571 aa11□□□□□ -0.65
TNFRSF11B-202ENST00000517352 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
TNFRSF11B-202ENST00000517352 UNC13BO14795 1591 aa10.99□□□□□ -0.65
TNFRSF11B-202ENST00000517352 XIRP1Q702N8 1843 aaKnown RBP10.99□□□□□ -0.65
TNFRSF11B-202ENST00000517352 AFF2P51816 1311 aa10.99□□□□□ -0.65
TNFRSF11B-202ENST00000517352 QTRT2Q9H974 415 aaKnown RBP10.98□□□□□ -0.65
TNFRSF11B-202ENST00000517352 DDX17Q92841 729 aaKnown RBP10.97□□□□□ -0.65
TNFRSF11B-202ENST00000517352 METP08581 1390 aa10.97□□□□□ -0.65
TNFRSF11B-202ENST00000517352 DCCP43146 1447 aa10.97□□□□□ -0.65
TNFRSF11B-202ENST00000517352 IQGAP3Q86VI3 1631 aa10.97□□□□□ -0.65
TNFRSF11B-202ENST00000517352 E9PCH4 1651 aa10.96□□□□□ -0.65
TNFRSF11B-202ENST00000517352 RPGRIP1LQ68CZ1 1315 aa10.96□□□□□ -0.65
TNFRSF11B-202ENST00000517352 HAP1P54257 671 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF11B-202ENST00000517352 RBM6P78332 1123 aaKnown RBP10.96□□□□□ -0.65
TNFRSF11B-202ENST00000517352 RGL3Q3MIN7 710 aa10.96□□□□□ -0.65
TNFRSF11B-202ENST00000517352 ESCO1Q5FWF5 840 aa10.96□□□□□ -0.65
TNFRSF11B-202ENST00000517352 STK26Q9P289 416 aa10.96□□□□□ -0.65
TNFRSF11B-202ENST00000517352 CHD2O14647 1828 aaKnown RBP10.95□□□□□ -0.66
TNFRSF11B-202ENST00000517352 PTPRUQ92729 1446 aa10.95□□□□□ -0.66
TNFRSF11B-202ENST00000517352 NPM3O75607 178 aaKnown RBP10.95□□□□□ -0.66
TNFRSF11B-202ENST00000517352 UPF1Q92900 1129 aaKnown RBP eCLIP10.95□□□□□ -0.66
TNFRSF11B-202ENST00000517352 RNF39Q9H2S5 420 aa10.95□□□□□ -0.66
TNFRSF11B-202ENST00000517352 USP21Q9UK80 565 aa10.94□□□□□ -0.66
TNFRSF11B-202ENST00000517352 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF11B-202ENST00000517352 NUTM2FA1L443 756 aa10.93□□□□□ -0.66
TNFRSF11B-202ENST00000517352 ORAI2Q96SN7 254 aa10.93□□□□□ -0.66
TNFRSF11B-202ENST00000517352 ASXL1Q8IXJ9 1541 aa10.93□□□□□ -0.66
TNFRSF11B-202ENST00000517352 MYO5BQ9ULV0 1848 aa10.93□□□□□ -0.66
TNFRSF11B-202ENST00000517352 ADGRL3Q9HAR2 1447 aa10.92□□□□□ -0.66
TNFRSF11B-202ENST00000517352 LRP6O75581 1613 aa10.92□□□□□ -0.66
TNFRSF11B-202ENST00000517352 COL16A1Q07092 1604 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF11B-202ENST00000517352 TRPC5Q9UL62 973 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF11B-202ENST00000517352 MST1RQ04912 1400 aa10.92□□□□□ -0.66
TNFRSF11B-202ENST00000517352 SETD5Q9C0A6 1442 aa10.92□□□□□ -0.66
TNFRSF11B-202ENST00000517352 LRPPRCP42704 1394 aaKnown RBP10.91□□□□□ -0.66
TNFRSF11B-202ENST00000517352 AHDC1Q5TGY3 1603 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF11B-202ENST00000517352 NPHP3Q7Z494 1330 aa10.91□□□□□ -0.66
TNFRSF11B-202ENST00000517352 PLEKHG5O94827 1062 aa10.91□□□□□ -0.66
TNFRSF11B-202ENST00000517352 LMOD2Q6P5Q4 547 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms