RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 WASHC4Q2M389 1173 aa5.78□□□□□ -1.48
RNU4-60P-201ENST00000517239 DNAJC14Q6Y2X3 702 aaPredicted RBP5.78□□□□□ -1.48
RNU4-60P-201ENST00000517239 GIPC2Q8TF65 315 aa5.78□□□□□ -1.48
RNU4-60P-201ENST00000517239 C8orf37Q96NL8 207 aa5.78□□□□□ -1.48
RNU4-60P-201ENST00000517239 FAM161AQ3B820 660 aa5.77□□□□□ -1.49
RNU4-60P-201ENST00000517239 ANKRD62A6NC57 917 aa5.76□□□□□ -1.49
RNU4-60P-201ENST00000517239 SOCS7O14512 581 aa5.76□□□□□ -1.49
RNU4-60P-201ENST00000517239 VAC14Q08AM6 782 aa5.76□□□□□ -1.49
RNU4-60P-201ENST00000517239 CERS3Q8IU89 383 aa5.76□□□□□ -1.49
RNU4-60P-201ENST00000517239 UBXN4Q92575 508 aa5.76□□□□□ -1.49
RNU4-60P-201ENST00000517239 CDHR5Q9HBB8 845 aa5.76□□□□□ -1.49
RNU4-60P-201ENST00000517239 NPDC1Q9NQX5 325 aaPredicted RBP5.76□□□□□ -1.49
RNU4-60P-201ENST00000517239 NDUFB9Q9Y6M9 179 aa5.76□□□□□ -1.49
RNU4-60P-201ENST00000517239 KDM4AO75164 1064 aa5.75□□□□□ -1.49
RNU4-60P-201ENST00000517239 PAK3O75914 559 aaPredicted RBP5.75□□□□□ -1.49
RNU4-60P-201ENST00000517239 ZC3H6P61129 1189 aaKnown RBP5.75□□□□□ -1.49
RNU4-60P-201ENST00000517239 NOM1Q5C9Z4 860 aaKnown RBP5.75□□□□□ -1.49
RNU4-60P-201ENST00000517239 ALG2Q9H553 416 aa5.75□□□□□ -1.49
RNU4-60P-201ENST00000517239 USP17L8P0C7I0 530 aa5.74□□□□□ -1.49
RNU4-60P-201ENST00000517239 MARSP56192 900 aaKnown RBP5.74□□□□□ -1.49
RNU4-60P-201ENST00000517239 NAALADL2Q58DX5 795 aa5.74□□□□□ -1.49
RNU4-60P-201ENST00000517239 ZNF326Q5BKZ1 582 aaKnown RBP5.74□□□□□ -1.49
RNU4-60P-201ENST00000517239 TMEM106CQ9BVX2 250 aa5.74□□□□□ -1.49
RNU4-60P-201ENST00000517239 NUTM2BA6NNL0 878 aaPredicted RBP5.73□□□□□ -1.49
RNU4-60P-201ENST00000517239 NUTM2EB1AL46 878 aaPredicted RBP5.73□□□□□ -1.49
RNU4-60P-201ENST00000517239 OATP04181 439 aa5.73□□□□□ -1.49
RNU4-60P-201ENST00000517239 ARID4AP29374 1257 aaPredicted RBP5.73□□□□□ -1.49
RNU4-60P-201ENST00000517239 RTL5Q5HYW3 569 aaPredicted RBP5.73□□□□□ -1.49
RNU4-60P-201ENST00000517239 NUTM2DQ5VT03 806 aaPredicted RBP5.73□□□□□ -1.49
RNU4-60P-201ENST00000517239 METTL3Q86U44 580 aaKnown RBP5.73□□□□□ -1.49
RNU4-60P-201ENST00000517239 NUTM2AQ8IVF1 878 aaPredicted RBP5.73□□□□□ -1.49
RNU4-60P-201ENST00000517239 SPIRE2Q8WWL2 714 aa5.73□□□□□ -1.49
RNU4-60P-201ENST00000517239 C2orf72A6NCS6 295 aa5.72□□□□□ -1.49
RNU4-60P-201ENST00000517239 PITPNM1O00562 1244 aa5.72□□□□□ -1.49
RNU4-60P-201ENST00000517239 SPTLC1O15269 473 aa5.72□□□□□ -1.49
RNU4-60P-201ENST00000517239 EVI5O60447 810 aa5.72□□□□□ -1.49
RNU4-60P-201ENST00000517239 QPCTQ16769 361 aa5.72□□□□□ -1.49
RNU4-60P-201ENST00000517239 TUSC1Q2TAM9 212 aa5.72□□□□□ -1.49
RNU4-60P-201ENST00000517239 PHLDB3Q6NSJ2 640 aa5.72□□□□□ -1.49
RNU4-60P-201ENST00000517239 UCN2Q96RP3 112 aa5.72□□□□□ -1.49
RNU4-60P-201ENST00000517239 HIRIP3Q9BW71 556 aaPredicted RBP5.72□□□□□ -1.49
RNU4-60P-201ENST00000517239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.72□□□□□ -1.49
RNU4-60P-201ENST00000517239 MAFBQ9Y5Q3 323 aaPredicted RBP5.72□□□□□ -1.49
RNU4-60P-201ENST00000517239 ANKRD33BA6NCL7 494 aa5.71□□□□□ -1.5
RNU4-60P-201ENST00000517239 SF3A1Q15459 793 aaKnown RBP5.71□□□□□ -1.5
RNU4-60P-201ENST00000517239 RBM33Q96EV2 1170 aaKnown RBP5.71□□□□□ -1.5
RNU4-60P-201ENST00000517239 L3MBTL3Q96JM7 780 aaPredicted RBP5.71□□□□□ -1.5
RNU4-60P-201ENST00000517239 GJD4Q96KN9 370 aaPredicted RBP5.71□□□□□ -1.5
RNU4-60P-201ENST00000517239 RBM42Q9BTD8 480 aaKnown RBP5.71□□□□□ -1.5
RNU4-60P-201ENST00000517239 BIN2Q9UBW5 565 aaPredicted RBP5.71□□□□□ -1.5
RNU4-60P-201ENST00000517239 SOWAHDA6NJG2 315 aa5.7□□□□□ -1.5
RNU4-60P-201ENST00000517239 MAP3K7O43318 606 aa5.7□□□□□ -1.5
RNU4-60P-201ENST00000517239 LILRB3O75022 631 aa5.7□□□□□ -1.5
RNU4-60P-201ENST00000517239 TMEM164Q5U3C3 297 aa5.7□□□□□ -1.5
RNU4-60P-201ENST00000517239 DPY19L2Q6NUT2 758 aa5.7□□□□□ -1.5
RNU4-60P-201ENST00000517239 GIMAP6Q6P9H5 292 aa5.7□□□□□ -1.5
RNU4-60P-201ENST00000517239 RSBN1LQ6PCB5 846 aaPredicted RBP5.7□□□□□ -1.5
RNU4-60P-201ENST00000517239 TBC1D9Q6ZT07 1266 aa5.7□□□□□ -1.5
RNU4-60P-201ENST00000517239 NOL8Q76FK4 1167 aaKnown RBP5.7□□□□□ -1.5
RNU4-60P-201ENST00000517239 NUTM1Q86Y26 1132 aa5.7□□□□□ -1.5
RNU4-60P-201ENST00000517239 MICALL2Q8IY33 904 aa5.7□□□□□ -1.5
RNU4-60P-201ENST00000517239 PRR7Q8TB68 274 aa5.7□□□□□ -1.5
RNU4-60P-201ENST00000517239 MOXD2PA6NHM9 499 aa5.69□□□□□ -1.5
RNU4-60P-201ENST00000517239 SEMA3FQ13275 785 aa5.69□□□□□ -1.5
RNU4-60P-201ENST00000517239 PXYLP1Q8TE99 480 aa5.69□□□□□ -1.5
RNU4-60P-201ENST00000517239 UBE2Q2Q8WVN8 375 aa5.69□□□□□ -1.5
RNU4-60P-201ENST00000517239 PCDHB15Q9Y5E8 787 aa5.69□□□□□ -1.5
RNU4-60P-201ENST00000517239 MARCH6O60337 910 aa5.68□□□□□ -1.5
RNU4-60P-201ENST00000517239 NDUFV2P19404 249 aa5.68□□□□□ -1.5
RNU4-60P-201ENST00000517239 VAMP1P23763 118 aa5.68□□□□□ -1.5
RNU4-60P-201ENST00000517239 DPH6Q7L8W6 267 aa5.68□□□□□ -1.5
RNU4-60P-201ENST00000517239 CABLES1Q8TDN4 633 aa5.68□□□□□ -1.5
RNU4-60P-201ENST00000517239 STK32AQ8WU08 396 aa5.68□□□□□ -1.5
RNU4-60P-201ENST00000517239 PSMD1Q99460 953 aa5.68□□□□□ -1.5
RNU4-60P-201ENST00000517239 SSFA2P28290 1259 aa5.67□□□□□ -1.5
RNU4-60P-201ENST00000517239 TAGLNQ01995 201 aaKnown RBP5.67□□□□□ -1.5
RNU4-60P-201ENST00000517239 EN1Q05925 392 aaPredicted RBP5.67□□□□□ -1.5
RNU4-60P-201ENST00000517239 ELOAQ14241 798 aaKnown RBP5.67□□□□□ -1.5
RNU4-60P-201ENST00000517239 ZNF662Q6ZS27 426 aa5.67□□□□□ -1.5
RNU4-60P-201ENST00000517239 NPAS4Q8IUM7 802 aa5.67□□□□□ -1.5
RNU4-60P-201ENST00000517239 ZNF592Q92610 1267 aa5.67□□□□□ -1.5
RNU4-60P-201ENST00000517239 ZMIZ1Q9ULJ6 1067 aa5.67□□□□□ -1.5
RNU4-60P-201ENST00000517239 NOVA2Q9UNW9 492 aaKnown RBP5.67□□□□□ -1.5
RNU4-60P-201ENST00000517239 ZC3H4Q9UPT8 1303 aaKnown RBP5.67□□□□□ -1.5
RNU4-60P-201ENST00000517239 ATP9BO43861 1147 aa5.66□□□□□ -1.5
RNU4-60P-201ENST00000517239 ERCC5P28715 1186 aaPredicted RBP5.66□□□□□ -1.5
RNU4-60P-201ENST00000517239 SERPINB4P48594 390 aa5.66□□□□□ -1.5
RNU4-60P-201ENST00000517239 TSNAXIP1Q2TAA8 658 aa5.66□□□□□ -1.5
RNU4-60P-201ENST00000517239 KANK4Q5T7N3 995 aaPredicted RBP5.66□□□□□ -1.5
RNU4-60P-201ENST00000517239 HMX1Q9NP08 348 aaPredicted RBP5.66□□□□□ -1.5
RNU4-60P-201ENST00000517239 ADGRG1Q9Y653 693 aa5.66□□□□□ -1.5
RNU4-60P-201ENST00000517239 KIF3CO14782 793 aa5.65□□□□□ -1.5
RNU4-60P-201ENST00000517239 GPR37L1O60883 481 aa5.65□□□□□ -1.5
RNU4-60P-201ENST00000517239 SOX11P35716 441 aa5.65□□□□□ -1.5
RNU4-60P-201ENST00000517239 CTDSPL2Q05D32 466 aa5.65□□□□□ -1.5
RNU4-60P-201ENST00000517239 ILDR1Q86SU0 546 aaPredicted RBP5.65□□□□□ -1.5
RNU4-60P-201ENST00000517239 ZNF526Q8TF50 670 aaPredicted RBP5.65□□□□□ -1.5
RNU4-60P-201ENST00000517239 EPAS1Q99814 870 aa5.65□□□□□ -1.5
RNU4-60P-201ENST00000517239 TRIM34Q9BYJ4 488 aa5.65□□□□□ -1.5
RNU4-60P-201ENST00000517239 BRPF3Q9ULD4 1205 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms