RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 PLA2G2CQ5R387 149 aa2.5□□□□□ -2.01
RNU6-542P-201ENST00000516405 KANK3Q6NY19 840 aa2.5□□□□□ -2.01
RNU6-542P-201ENST00000516405 LMOD2Q6P5Q4 547 aa2.5□□□□□ -2.01
RNU6-542P-201ENST00000516405 PLPP6Q8IY26 295 aa2.5□□□□□ -2.01
RNU6-542P-201ENST00000516405 VSIG8P0DPA2 414 aa2.49□□□□□ -2.01
RNU6-542P-201ENST00000516405 FOXK1P85037 733 aa2.49□□□□□ -2.01
RNU6-542P-201ENST00000516405 JPH4Q96JJ6 628 aa2.49□□□□□ -2.01
RNU6-542P-201ENST00000516405 ONECUT3O60422 494 aaPredicted RBP2.48□□□□□ -2.01
RNU6-542P-201ENST00000516405 ZPR1O75312 459 aa2.48□□□□□ -2.01
RNU6-542P-201ENST00000516405 NLRP6P59044 892 aa2.48□□□□□ -2.01
RNU6-542P-201ENST00000516405 CYP4X1Q8N118 509 aa2.47□□□□□ -2.01
RNU6-542P-201ENST00000516405 OXER1Q8TDS5 423 aa2.47□□□□□ -2.01
RNU6-542P-201ENST00000516405 FURINP09958 794 aa2.46□□□□□ -2.02
RNU6-542P-201ENST00000516405 SLURP2P0DP57 97 aa2.46□□□□□ -2.02
RNU6-542P-201ENST00000516405 SMPD1P17405 629 aa2.46□□□□□ -2.02
RNU6-542P-201ENST00000516405 ITGB7P26010 798 aa2.46□□□□□ -2.02
RNU6-542P-201ENST00000516405 SAMD7Q7Z3H4 446 aa2.46□□□□□ -2.02
RNU6-542P-201ENST00000516405 KRT76Q01546 638 aa2.45□□□□□ -2.02
RNU6-542P-201ENST00000516405 DSG2Q14126 1118 aa2.45□□□□□ -2.02
RNU6-542P-201ENST00000516405 ZNF385CQ66K41 422 aaPredicted RBP2.45□□□□□ -2.02
RNU6-542P-201ENST00000516405 TRIM6-TRIM34B2RNG4 842 aa2.44□□□□□ -2.02
RNU6-542P-201ENST00000516405 ARHGEF15O94989 841 aa2.44□□□□□ -2.02
RNU6-542P-201ENST00000516405 S1PR4O95977 384 aa2.44□□□□□ -2.02
RNU6-542P-201ENST00000516405 BAG6P46379 1132 aa2.44□□□□□ -2.02
RNU6-542P-201ENST00000516405 GALNT6Q8NCL4 622 aa2.44□□□□□ -2.02
RNU6-542P-201ENST00000516405 UPF1Q92900 1129 aaKnown RBP eCLIP2.44□□□□□ -2.02
RNU6-542P-201ENST00000516405 DCAF5Q96JK2 942 aa2.44□□□□□ -2.02
RNU6-542P-201ENST00000516405 MFRPQ9BY79 579 aa2.44□□□□□ -2.02
RNU6-542P-201ENST00000516405 TLL1O43897 1013 aa2.43□□□□□ -2.02
RNU6-542P-201ENST00000516405 CIZ1Q9ULV3 898 aaPredicted RBP2.43□□□□□ -2.02
RNU6-542P-201ENST00000516405 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.42□□□□□ -2.02
RNU6-542P-201ENST00000516405 WHAMMQ8TF30 809 aa2.42□□□□□ -2.02
RNU6-542P-201ENST00000516405 HPS1Q92902 700 aa2.42□□□□□ -2.02
RNU6-542P-201ENST00000516405 ZFP91Q96JP5 570 aaPredicted RBP2.42□□□□□ -2.02
RNU6-542P-201ENST00000516405 TTC24A2A3L6 582 aaPredicted RBP2.41□□□□□ -2.02
RNU6-542P-201ENST00000516405 J3QL48 77 aa2.41□□□□□ -2.02
RNU6-542P-201ENST00000516405 FZD5Q13467 585 aa2.41□□□□□ -2.02
RNU6-542P-201ENST00000516405 LCE4AQ5TA78 99 aa2.41□□□□□ -2.02
RNU6-542P-201ENST00000516405 TRIM46Q7Z4K8 759 aa2.41□□□□□ -2.02
RNU6-542P-201ENST00000516405 PCDHGA10Q9Y5H3 936 aa2.41□□□□□ -2.02
RNU6-542P-201ENST00000516405 BMP1P13497 986 aa2.4□□□□□ -2.03
RNU6-542P-201ENST00000516405 YBX3P16989 372 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU6-542P-201ENST00000516405 SVOPQ8N4V2 548 aa2.4□□□□□ -2.03
RNU6-542P-201ENST00000516405 SCARF2Q96GP6 870 aaPredicted RBP2.4□□□□□ -2.03
RNU6-542P-201ENST00000516405 GPHNQ9NQX3 736 aaPredicted RBP2.4□□□□□ -2.03
RNU6-542P-201ENST00000516405 MARSP56192 900 aaKnown RBP2.39□□□□□ -2.03
RNU6-542P-201ENST00000516405 ZMYM1Q5SVZ6 1142 aa2.39□□□□□ -2.03
RNU6-542P-201ENST00000516405 CNTNAP3BQ96NU0 1288 aa2.39□□□□□ -2.03
RNU6-542P-201ENST00000516405 CNTNAP3Q9BZ76 1288 aa2.39□□□□□ -2.03
RNU6-542P-201ENST00000516405 TSKSQ9UJT2 592 aa2.39□□□□□ -2.03
RNU6-542P-201ENST00000516405 SMAPO00193 183 aa2.38□□□□□ -2.03
RNU6-542P-201ENST00000516405 EVI5O60447 810 aa2.38□□□□□ -2.03
RNU6-542P-201ENST00000516405 FOXD4L6Q3SYB3 417 aaPredicted RBP2.38□□□□□ -2.03
RNU6-542P-201ENST00000516405 BLOC1S3Q6QNY0 202 aa2.38□□□□□ -2.03
RNU6-542P-201ENST00000516405 FOXD4L3Q6VB84 417 aaPredicted RBP2.38□□□□□ -2.03
RNU6-542P-201ENST00000516405 GPR161Q8N6U8 529 aaKnown RBP2.38□□□□□ -2.03
RNU6-542P-201ENST00000516405 C3orf80F5H4A9 247 aa2.37□□□□□ -2.03
RNU6-542P-201ENST00000516405 PPP1R37O75864 691 aa2.37□□□□□ -2.03
RNU6-542P-201ENST00000516405 KLHL34Q8N239 644 aa2.37□□□□□ -2.03
RNU6-542P-201ENST00000516405 SNIP1Q8TAD8 396 aaKnown RBP2.37□□□□□ -2.03
RNU6-542P-201ENST00000516405 RNF40O75150 1001 aa2.36□□□□□ -2.03
RNU6-542P-201ENST00000516405 C6orf132Q5T0Z8 1188 aa2.36□□□□□ -2.03
RNU6-542P-201ENST00000516405 CCER1Q8TC90 406 aaPredicted RBP2.36□□□□□ -2.03
RNU6-542P-201ENST00000516405 SOBPA7XYQ1 873 aa2.35□□□□□ -2.03
RNU6-542P-201ENST00000516405 RPIAP49247 311 aa2.35□□□□□ -2.03
RNU6-542P-201ENST00000516405 LCE5AQ5TCM9 118 aa2.35□□□□□ -2.03
RNU6-542P-201ENST00000516405 CNTNAP5Q8WYK1 1306 aa2.35□□□□□ -2.03
RNU6-542P-201ENST00000516405 CD2BP2O95400 341 aaKnown RBP2.34□□□□□ -2.03
RNU6-542P-201ENST00000516405 RNF25Q96BH1 459 aaPredicted RBP2.34□□□□□ -2.03
RNU6-542P-201ENST00000516405 ZFP42Q96MM3 310 aa2.34□□□□□ -2.03
RNU6-542P-201ENST00000516405 PCDHB3Q9Y5E6 796 aa2.34□□□□□ -2.03
RNU6-542P-201ENST00000516405 SCO2A0A1W2PP80 73 aa2.33□□□□□ -2.04
RNU6-542P-201ENST00000516405 PPFIA3O75145 1194 aa2.33□□□□□ -2.04
RNU6-542P-201ENST00000516405 RNFT1Q5M7Z0 435 aa2.33□□□□□ -2.04
RNU6-542P-201ENST00000516405 ARTNQ5T4W7 220 aa2.33□□□□□ -2.04
RNU6-542P-201ENST00000516405 PACS2Q86VP3 889 aa2.33□□□□□ -2.04
RNU6-542P-201ENST00000516405 ZFP64Q9NPA5 681 aa2.33□□□□□ -2.04
RNU6-542P-201ENST00000516405 KRBA1A5PL33 1030 aa2.32□□□□□ -2.04
RNU6-542P-201ENST00000516405 WNT7AO00755 349 aa2.32□□□□□ -2.04
RNU6-542P-201ENST00000516405 TYW1BQ6NUM6 668 aa2.32□□□□□ -2.04
RNU6-542P-201ENST00000516405 FBXW7Q969H0 707 aa2.32□□□□□ -2.04
RNU6-542P-201ENST00000516405 MRGPRX2Q96LB1 330 aa2.32□□□□□ -2.04
RNU6-542P-201ENST00000516405 SLC6A16Q9GZN6 736 aa2.32□□□□□ -2.04
RNU6-542P-201ENST00000516405 FAM198AQ9UFP1 575 aa2.32□□□□□ -2.04
RNU6-542P-201ENST00000516405 RIOK3O14730 519 aaKnown RBP2.31□□□□□ -2.04
RNU6-542P-201ENST00000516405 ADH1BP00325 375 aa2.31□□□□□ -2.04
RNU6-542P-201ENST00000516405 COL25A1Q9BXS0 654 aaPredicted RBP2.31□□□□□ -2.04
RNU6-542P-201ENST00000516405 VGFO15240 615 aaPredicted RBP2.3□□□□□ -2.04
RNU6-542P-201ENST00000516405 KRTAP1-1Q07627 177 aa2.3□□□□□ -2.04
RNU6-542P-201ENST00000516405 NBPF11Q86T75 865 aa2.3□□□□□ -2.04
RNU6-542P-201ENST00000516405 SEMA6BQ9H3T3 888 aa2.3□□□□□ -2.04
RNU6-542P-201ENST00000516405 PHF14O94880 888 aa2.29□□□□□ -2.04
RNU6-542P-201ENST00000516405 TXKP42681 527 aa2.29□□□□□ -2.04
RNU6-542P-201ENST00000516405 LYPD4Q6UWN0 246 aa2.29□□□□□ -2.04
RNU6-542P-201ENST00000516405 FMNL2Q96PY5 1086 aa2.29□□□□□ -2.04
RNU6-542P-201ENST00000516405 BCL11BQ9C0K0 894 aaPredicted RBP2.29□□□□□ -2.04
RNU6-542P-201ENST00000516405 PHF20L1A8MW92 1017 aa2.28□□□□□ -2.04
RNU6-542P-201ENST00000516405 CAPN5O15484 640 aaPredicted RBP2.28□□□□□ -2.04
RNU6-542P-201ENST00000516405 MCTP1Q6DN14 999 aa2.28□□□□□ -2.04
RNU6-542P-201ENST00000516405 TATDN2Q93075 761 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms