RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 EHBP1L1Q8N3D4 1523 aa14.32□□□□□ -0.12
CDC42SE2-212ENST00000515533 PLXNC1O60486 1568 aa14.32□□□□□ -0.12
CDC42SE2-212ENST00000515533 TIAM1Q13009 1591 aa14.31□□□□□ -0.12
CDC42SE2-212ENST00000515533 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.3□□□□□ -0.12
CDC42SE2-212ENST00000515533 A2MP01023 1474 aa14.3□□□□□ -0.12
CDC42SE2-212ENST00000515533 VASPP50552 380 aaPredicted RBP14.29□□□□□ -0.12
CDC42SE2-212ENST00000515533 GSE1Q14687 1217 aa14.29□□□□□ -0.12
CDC42SE2-212ENST00000515533 KLHL34Q8N239 644 aa14.29□□□□□ -0.12
CDC42SE2-212ENST00000515533 PTPRTO14522 1441 aa14.29□□□□□ -0.12
CDC42SE2-212ENST00000515533 NPATQ14207 1427 aa14.29□□□□□ -0.12
CDC42SE2-212ENST00000515533 MYO3AQ8NEV4 1616 aa14.29□□□□□ -0.12
CDC42SE2-212ENST00000515533 ZNF142P52746 1687 aaPredicted RBP14.29□□□□□ -0.12
CDC42SE2-212ENST00000515533 CAMSAP1Q5T5Y3 1602 aa14.28□□□□□ -0.12
CDC42SE2-212ENST00000515533 ZNF467Q7Z7K2 595 aaPredicted RBP14.28□□□□□ -0.12
CDC42SE2-212ENST00000515533 PDCD7Q8N8D1 485 aaKnown RBP14.27□□□□□ -0.13
CDC42SE2-212ENST00000515533 TMEM121BQ9BXQ6 578 aaPredicted RBP14.27□□□□□ -0.13
CDC42SE2-212ENST00000515533 NCOA1Q15788 1441 aa14.26□□□□□ -0.13
CDC42SE2-212ENST00000515533 ZMYM3Q14202 1370 aa14.26□□□□□ -0.13
CDC42SE2-212ENST00000515533 SNPHO15079 494 aa14.25□□□□□ -0.13
CDC42SE2-212ENST00000515533 CEP162Q5TB80 1403 aa14.24□□□□□ -0.13
CDC42SE2-212ENST00000515533 GGT6Q6P531 493 aa14.24□□□□□ -0.13
CDC42SE2-212ENST00000515533 CEP170BQ9Y4F5 1589 aaPredicted RBP14.24□□□□□ -0.13
CDC42SE2-212ENST00000515533 CHRM1P11229 460 aaPredicted RBP14.22□□□□□ -0.13
CDC42SE2-212ENST00000515533 LTBP4Q8N2S1 1624 aa14.22□□□□□ -0.13
CDC42SE2-212ENST00000515533 ZNF644Q9H582 1327 aaPredicted RBP14.21□□□□□ -0.13
CDC42SE2-212ENST00000515533 MBD5Q9P267 1494 aa14.21□□□□□ -0.13
CDC42SE2-212ENST00000515533 GOLGA2Q08379 1002 aa14.21□□□□□ -0.13
CDC42SE2-212ENST00000515533 MKRN3Q13064 507 aaKnown RBP14.21□□□□□ -0.13
CDC42SE2-212ENST00000515533 RTEL1-TNFRSF6BF6WH68 1400 aa14.21□□□□□ -0.13
CDC42SE2-212ENST00000515533 POLR1AO95602 1720 aaPredicted RBP14.21□□□□□ -0.14
CDC42SE2-212ENST00000515533 IQSEC2Q5JU85 1478 aa14.2□□□□□ -0.14
CDC42SE2-212ENST00000515533 PTPRKQ15262 1439 aa14.2□□□□□ -0.14
CDC42SE2-212ENST00000515533 CAMSAP2Q08AD1 1489 aa14.19□□□□□ -0.14
CDC42SE2-212ENST00000515533 PLA2R1Q13018 1463 aa14.19□□□□□ -0.14
CDC42SE2-212ENST00000515533 NCOA2Q15596 1464 aa14.19□□□□□ -0.14
CDC42SE2-212ENST00000515533 CCDC141Q6ZP82 1450 aa14.19□□□□□ -0.14
CDC42SE2-212ENST00000515533 PSEN1P49768 467 aa14.17□□□□□ -0.14
CDC42SE2-212ENST00000515533 C3orf67Q6ZVT6 689 aa14.17□□□□□ -0.14
CDC42SE2-212ENST00000515533 DHX29Q7Z478 1369 aaKnown RBP14.17□□□□□ -0.14
CDC42SE2-212ENST00000515533 NCKAP5LQ9HCH0 1330 aa14.16□□□□□ -0.14
CDC42SE2-212ENST00000515533 FAM135AQ9P2D6 1515 aa14.16□□□□□ -0.14
CDC42SE2-212ENST00000515533 DNMT1P26358 1616 aaKnown RBP14.16□□□□□ -0.14
CDC42SE2-212ENST00000515533 MARVELD3Q96A59 401 aa14.16□□□□□ -0.14
CDC42SE2-212ENST00000515533 L3MBTL3Q96JM7 780 aaPredicted RBP14.16□□□□□ -0.14
CDC42SE2-212ENST00000515533 KDM5DQ9BY66 1539 aa14.15□□□□□ -0.14
CDC42SE2-212ENST00000515533 ARHGEF5Q12774 1597 aa14.15□□□□□ -0.14
CDC42SE2-212ENST00000515533 TCOF1Q13428 1488 aaKnown RBP14.15□□□□□ -0.14
CDC42SE2-212ENST00000515533 PKD2Q13563 968 aa14.15□□□□□ -0.14
CDC42SE2-212ENST00000515533 CFAP65Q6ZU64 1925 aaKnown RBP14.15□□□□□ -0.14
CDC42SE2-212ENST00000515533 A2ML1A8K2U0 1454 aa14.14□□□□□ -0.15
CDC42SE2-212ENST00000515533 DISP3Q9P2K9 1392 aa14.14□□□□□ -0.15
CDC42SE2-212ENST00000515533 KIF3BO15066 747 aa14.14□□□□□ -0.15
CDC42SE2-212ENST00000515533 RSPH4AQ5TD94 716 aa14.14□□□□□ -0.15
CDC42SE2-212ENST00000515533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.14□□□□□ -0.15
CDC42SE2-212ENST00000515533 SPATA31D1Q6ZQQ2 1576 aa14.13□□□□□ -0.15
CDC42SE2-212ENST00000515533 ZNF335Q9H4Z2 1342 aaPredicted RBP14.12□□□□□ -0.15
CDC42SE2-212ENST00000515533 PZPP20742 1482 aa14.12□□□□□ -0.15
CDC42SE2-212ENST00000515533 ZC3H13Q5T200 1668 aaKnown RBP14.11□□□□□ -0.15
CDC42SE2-212ENST00000515533 TSPY4P0CV99 314 aa14.11□□□□□ -0.15
CDC42SE2-212ENST00000515533 TSPY10P0CW01 314 aa14.11□□□□□ -0.15
CDC42SE2-212ENST00000515533 VPS8Q8N3P4 1428 aa14.11□□□□□ -0.15
CDC42SE2-212ENST00000515533 TNRQ92752 1358 aa14.1□□□□□ -0.15
CDC42SE2-212ENST00000515533 LRRC9Q6ZRR7 1453 aa14.1□□□□□ -0.15
CDC42SE2-212ENST00000515533 WASHC2CQ9Y4E1 1318 aa14.1□□□□□ -0.15
CDC42SE2-212ENST00000515533 MAST1Q9Y2H9 1570 aa14.09□□□□□ -0.15
CDC42SE2-212ENST00000515533 RNF17Q9BXT8 1623 aaKnown RBP14.09□□□□□ -0.15
CDC42SE2-212ENST00000515533 EIF2AK4Q9P2K8 1649 aaKnown RBP14.09□□□□□ -0.15
CDC42SE2-212ENST00000515533 PDAP1Q13442 181 aaKnown RBP14.08□□□□□ -0.16
CDC42SE2-212ENST00000515533 NEURL4Q96JN8 1562 aa14.08□□□□□ -0.16
CDC42SE2-212ENST00000515533 CEP152O94986 1710 aa14.07□□□□□ -0.16
CDC42SE2-212ENST00000515533 UGGT1Q9NYU2 1555 aa14.06□□□□□ -0.16
CDC42SE2-212ENST00000515533 UBAP1LF5GYI3 381 aa14.06□□□□□ -0.16
CDC42SE2-212ENST00000515533 FBXO31Q5XUX0 539 aaPredicted RBP14.06□□□□□ -0.16
CDC42SE2-212ENST00000515533 NLRP1Q9C000 1473 aa14.06□□□□□ -0.16
CDC42SE2-212ENST00000515533 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
CDC42SE2-212ENST00000515533 MAP3K1Q13233 1512 aa14.05□□□□□ -0.16
CDC42SE2-212ENST00000515533 CROCC2H7BZ55 1655 aa14.04□□□□□ -0.16
CDC42SE2-212ENST00000515533 EMP3P54852 163 aa14.04□□□□□ -0.16
CDC42SE2-212ENST00000515533 CPS1P31327 1500 aa14.04□□□□□ -0.16
CDC42SE2-212ENST00000515533 DEPDC5O75140 1603 aa14.04□□□□□ -0.16
CDC42SE2-212ENST00000515533 IQGAP1P46940 1657 aa14.04□□□□□ -0.16
CDC42SE2-212ENST00000515533 MYOM3Q5VTT5 1437 aa14.03□□□□□ -0.16
CDC42SE2-212ENST00000515533 MIA2Q96PC5 1412 aa14.03□□□□□ -0.16
CDC42SE2-212ENST00000515533 ABCC3O15438 1527 aa14.03□□□□□ -0.16
CDC42SE2-212ENST00000515533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.02□□□□□ -0.17
CDC42SE2-212ENST00000515533 LOC105371045A0A1W2PR82 267 aa14.02□□□□□ -0.17
CDC42SE2-212ENST00000515533 DPY19L2Q6NUT2 758 aa14.02□□□□□ -0.17
CDC42SE2-212ENST00000515533 ANKLE2Q86XL3 938 aa14.02□□□□□ -0.17
CDC42SE2-212ENST00000515533 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
CDC42SE2-212ENST00000515533 THEMISQ8N1K5 641 aaPredicted RBP14.02□□□□□ -0.17
CDC42SE2-212ENST00000515533 SPOCK2Q92563 424 aa14.02□□□□□ -0.17
CDC42SE2-212ENST00000515533 ILDR2Q71H61 639 aa14.01□□□□□ -0.17
CDC42SE2-212ENST00000515533 MROH1Q8NDA8 1641 aa14.01□□□□□ -0.17
CDC42SE2-212ENST00000515533 DUOX2Q9NRD8 1548 aa14□□□□□ -0.17
CDC42SE2-212ENST00000515533 SHANK2Q9UPX8 1470 aa14□□□□□ -0.17
CDC42SE2-212ENST00000515533 CABP2Q9NPB3 220 aa14□□□□□ -0.17
CDC42SE2-212ENST00000515533 CIZ1Q9ULV3 898 aaPredicted RBP14□□□□□ -0.17
CDC42SE2-212ENST00000515533 UBR1Q8IWV7 1749 aa14□□□□□ -0.17
CDC42SE2-212ENST00000515533 KANK4Q5T7N3 995 aaPredicted RBP13.99□□□□□ -0.17
CDC42SE2-212ENST00000515533 MED14O60244 1454 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms