RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 MAP2K5Q13163 448 aa8.27□□□□□ -1.09
CAST-242ENST00000515063 RSPH4AQ5TD94 716 aa8.27□□□□□ -1.09
CAST-242ENST00000515063 BCANQ96GW7 911 aa8.27□□□□□ -1.09
CAST-242ENST00000515063 FECHP22830 423 aa8.26□□□□□ -1.09
CAST-242ENST00000515063 FAM161AQ3B820 660 aa8.26□□□□□ -1.09
CAST-242ENST00000515063 MINK1Q8N4C8 1332 aaPredicted RBP8.25□□□□□ -1.09
CAST-242ENST00000515063 IFFO2Q5TF58 517 aa8.23□□□□□ -1.09
CAST-242ENST00000515063 IRF6O14896 467 aa8.22□□□□□ -1.09
CAST-242ENST00000515063 ITGBL1O95965 494 aaPredicted RBP8.21□□□□□ -1.1
CAST-242ENST00000515063 KMT5BQ4FZB7 885 aa8.21□□□□□ -1.1
CAST-242ENST00000515063 SULF1Q8IWU6 871 aa8.21□□□□□ -1.1
CAST-242ENST00000515063 DAXXQ9UER7 740 aaPredicted RBP8.21□□□□□ -1.1
CAST-242ENST00000515063 KCNC4Q03721 635 aa8.2□□□□□ -1.1
CAST-242ENST00000515063 KRI1Q8N9T8 703 aaKnown RBP8.2□□□□□ -1.1
CAST-242ENST00000515063 ZC3H15Q8WU90 426 aaKnown RBP8.19□□□□□ -1.1
CAST-242ENST00000515063 APLP1P51693 650 aa8.18□□□□□ -1.1
CAST-242ENST00000515063 BARGINQ6ZT62 677 aa8.18□□□□□ -1.1
CAST-242ENST00000515063 CCDC102AQ96A19 550 aa8.18□□□□□ -1.1
CAST-242ENST00000515063 ZMYND10O75800 440 aa8.17□□□□□ -1.1
CAST-242ENST00000515063 CFHP08603 1231 aa8.17□□□□□ -1.1
CAST-242ENST00000515063 IL21Q9HBE4 155 aa8.17□□□□□ -1.1
CAST-242ENST00000515063 RDH13Q8NBN7 331 aa8.16□□□□□ -1.1
CAST-242ENST00000515063 MTRQ99707 1265 aa8.15□□□□□ -1.1
CAST-242ENST00000515063 PCDHB3Q9Y5E6 796 aa8.15□□□□□ -1.1
CAST-242ENST00000515063 DDX11L8A8MPP1 907 aa8.14□□□□□ -1.11
CAST-242ENST00000515063 ACTN4O43707 911 aaKnown RBP8.14□□□□□ -1.11
CAST-242ENST00000515063 CLCN1P35523 988 aa8.14□□□□□ -1.11
CAST-242ENST00000515063 PHOX2BQ99453 314 aa8.14□□□□□ -1.11
CAST-242ENST00000515063 SLC10A3P09131 477 aa8.13□□□□□ -1.11
CAST-242ENST00000515063 TJAP1Q5JTD0 557 aa8.13□□□□□ -1.11
CAST-242ENST00000515063 A0A0G2JS52 829 aa8.12□□□□□ -1.11
CAST-242ENST00000515063 MDM2Q00987 491 aaPredicted RBP8.12□□□□□ -1.11
CAST-242ENST00000515063 GPCPD1Q9NPB8 672 aa8.12□□□□□ -1.11
CAST-242ENST00000515063 NLRP7Q8WX94 980 aa8.11□□□□□ -1.11
CAST-242ENST00000515063 NR1I2O75469 434 aa8.1□□□□□ -1.11
CAST-242ENST00000515063 RGS20O76081 388 aa8.1□□□□□ -1.11
CAST-242ENST00000515063 COPS2P61201 443 aa8.1□□□□□ -1.11
CAST-242ENST00000515063 GRIPAP1Q4V328 841 aa8.1□□□□□ -1.11
CAST-242ENST00000515063 TTLL12Q14166 644 aaPredicted RBP8.09□□□□□ -1.11
CAST-242ENST00000515063 AK7Q96M32 723 aa8.09□□□□□ -1.11
CAST-242ENST00000515063 ZPR1O75312 459 aa8.08□□□□□ -1.12
CAST-242ENST00000515063 GGCXP38435 758 aa8.08□□□□□ -1.12
CAST-242ENST00000515063 GCGRP47871 477 aa8.08□□□□□ -1.12
CAST-242ENST00000515063 AMHR2Q16671 573 aa8.08□□□□□ -1.12
CAST-242ENST00000515063 BLOC1S3Q6QNY0 202 aa8.08□□□□□ -1.12
CAST-242ENST00000515063 CD46P15529 392 aa8.07□□□□□ -1.12
CAST-242ENST00000515063 ATP6V1AP38606 617 aa8.06□□□□□ -1.12
CAST-242ENST00000515063 USP46P62068 366 aa8.05□□□□□ -1.12
CAST-242ENST00000515063 ZNF516Q92618 1163 aa8.05□□□□□ -1.12
CAST-242ENST00000515063 FAM217BQ9NTX9 383 aaPredicted RBP8.05□□□□□ -1.12
CAST-242ENST00000515063 FUT2Q10981 343 aa8.04□□□□□ -1.12
CAST-242ENST00000515063 TMUB1Q9BVT8 246 aa8.04□□□□□ -1.12
CAST-242ENST00000515063 TRIM66O15016 1216 aa8.03□□□□□ -1.12
CAST-242ENST00000515063 KDM4AO75164 1064 aa8.03□□□□□ -1.12
CAST-242ENST00000515063 NUTM1Q86Y26 1132 aa8.02□□□□□ -1.13
CAST-242ENST00000515063 SCUBE3Q8IX30 993 aa8.02□□□□□ -1.13
CAST-242ENST00000515063 ADH1BP00325 375 aa8.01□□□□□ -1.13
CAST-242ENST00000515063 SSTR3P32745 418 aaPredicted RBP8.01□□□□□ -1.13
CAST-242ENST00000515063 Q3C1V9 767 aa8.01□□□□□ -1.13
CAST-242ENST00000515063 PUS10Q3MIT2 529 aaKnown RBP8.01□□□□□ -1.13
CAST-242ENST00000515063 MORN1Q5T089 497 aa8.01□□□□□ -1.13
CAST-242ENST00000515063 GIGYF2Q6Y7W6 1299 aaKnown RBP8.01□□□□□ -1.13
CAST-242ENST00000515063 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.01□□□□□ -1.13
CAST-242ENST00000515063 SLC24A3Q9HC58 644 aa8□□□□□ -1.13
CAST-242ENST00000515063 SALL2Q9Y467 1007 aaPredicted RBP8□□□□□ -1.13
CAST-242ENST00000515063 FMNL1O95466 1100 aaPredicted RBP7.99□□□□□ -1.13
CAST-242ENST00000515063 DIXDC1Q155Q3 683 aa7.99□□□□□ -1.13
CAST-242ENST00000515063 PPP1R18Q6NYC8 613 aa7.99□□□□□ -1.13
CAST-242ENST00000515063 PARP9Q8IXQ6 854 aa7.99□□□□□ -1.13
CAST-242ENST00000515063 SPSB2Q99619 263 aa7.99□□□□□ -1.13
CAST-242ENST00000515063 TLL1O43897 1013 aa7.98□□□□□ -1.13
CAST-242ENST00000515063 PDE4DQ08499 809 aa7.98□□□□□ -1.13
CAST-242ENST00000515063 NKX2-3Q8TAU0 364 aa7.98□□□□□ -1.13
CAST-242ENST00000515063 REPIN1Q9BWE0 567 aaKnown RBP7.97□□□□□ -1.13
CAST-242ENST00000515063 SLC6A16Q9GZN6 736 aa7.97□□□□□ -1.13
CAST-242ENST00000515063 SLC27A5Q9Y2P5 690 aa7.97□□□□□ -1.13
CAST-242ENST00000515063 HOXA2O43364 376 aa7.96□□□□□ -1.14
CAST-242ENST00000515063 S1PR4O95977 384 aa7.94□□□□□ -1.14
CAST-242ENST00000515063 BRICD5Q6PL45 260 aa7.94□□□□□ -1.14
CAST-242ENST00000515063 ANKLE1Q8NAG6 615 aa7.94□□□□□ -1.14
CAST-242ENST00000515063 THAP11Q96EK4 314 aa7.94□□□□□ -1.14
CAST-242ENST00000515063 BEGAINQ9BUH8 593 aa7.94□□□□□ -1.14
CAST-242ENST00000515063 V9GY48 417 aaPredicted RBP7.94□□□□□ -1.14
CAST-242ENST00000515063 RNF223E7ERA6 249 aa7.93□□□□□ -1.14
CAST-242ENST00000515063 MSS51Q4VC12 460 aa7.93□□□□□ -1.14
CAST-242ENST00000515063 SPIRE2Q8WWL2 714 aa7.91□□□□□ -1.14
CAST-242ENST00000515063 PRKD2Q9BZL6 878 aa7.91□□□□□ -1.14
CAST-242ENST00000515063 FDX1P10109 184 aa7.9□□□□□ -1.14
CAST-242ENST00000515063 MS4A1P11836 297 aa7.9□□□□□ -1.14
CAST-242ENST00000515063 GJA5P36382 358 aa7.9□□□□□ -1.14
CAST-242ENST00000515063 RNF19BQ6ZMZ0 732 aa7.9□□□□□ -1.14
CAST-242ENST00000515063 USB1Q9BQ65 265 aaKnown RBP7.9□□□□□ -1.14
CAST-242ENST00000515063 TBC1D2Q9BYX2 928 aa7.89□□□□□ -1.15
CAST-242ENST00000515063 IRX2Q9BZI1 471 aaPredicted RBP7.88□□□□□ -1.15
CAST-242ENST00000515063 SPDYE5A6NIY4 337 aa7.87□□□□□ -1.15
CAST-242ENST00000515063 C6orf229H3BNL8 230 aa7.87□□□□□ -1.15
CAST-242ENST00000515063 SLC19A1P41440 591 aa7.87□□□□□ -1.15
CAST-242ENST00000515063 RETREG3Q86VR2 466 aa7.87□□□□□ -1.15
CAST-242ENST00000515063 FAM160A2Q8N612 972 aaPredicted RBP7.87□□□□□ -1.15
CAST-242ENST00000515063 HLA-CQ95604 372 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms