RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 ERVK-7P63135 1459 aa10.52□□□□□ -0.73
SMAD1-213ENST00000514778 NLRP1Q9C000 1473 aa10.52□□□□□ -0.73
SMAD1-213ENST00000514778 TNRQ92752 1358 aa10.52□□□□□ -0.73
SMAD1-213ENST00000514778 CEP152O94986 1710 aa10.51□□□□□ -0.73
SMAD1-213ENST00000514778 CHADLQ6NUI6 762 aa10.51□□□□□ -0.73
SMAD1-213ENST00000514778 SLC52A1Q9NWF4 448 aa10.51□□□□□ -0.73
SMAD1-213ENST00000514778 STAG3Q9UJ98 1225 aa10.51□□□□□ -0.73
SMAD1-213ENST00000514778 NOS1P29475 1434 aa10.5□□□□□ -0.73
SMAD1-213ENST00000514778 UHRF1BP1Q6BDS2 1440 aa10.5□□□□□ -0.73
SMAD1-213ENST00000514778 MPHOSPH9Q99550 1183 aa10.5□□□□□ -0.73
SMAD1-213ENST00000514778 PREX1Q8TCU6 1659 aa10.5□□□□□ -0.73
SMAD1-213ENST00000514778 PTPRTO14522 1441 aa10.5□□□□□ -0.73
SMAD1-213ENST00000514778 SETD1BQ9UPS6 1966 aaKnown RBP10.49□□□□□ -0.73
SMAD1-213ENST00000514778 FBXO31Q5XUX0 539 aaPredicted RBP10.49□□□□□ -0.73
SMAD1-213ENST00000514778 A2ML1A8K2U0 1454 aa10.48□□□□□ -0.73
SMAD1-213ENST00000514778 E9PCH4 1651 aa10.47□□□□□ -0.73
SMAD1-213ENST00000514778 C19orf67A6NJJ6 358 aa10.47□□□□□ -0.73
SMAD1-213ENST00000514778 PKD2Q13563 968 aa10.47□□□□□ -0.73
SMAD1-213ENST00000514778 LMTK3Q96Q04 1460 aa10.47□□□□□ -0.73
SMAD1-213ENST00000514778 EVX2Q03828 476 aa10.46□□□□□ -0.73
SMAD1-213ENST00000514778 THEMISQ8N1K5 641 aaPredicted RBP10.46□□□□□ -0.73
SMAD1-213ENST00000514778 MYO3AQ8NEV4 1616 aa10.46□□□□□ -0.74
SMAD1-213ENST00000514778 KDM5AP29375 1690 aaKnown RBP10.46□□□□□ -0.74
SMAD1-213ENST00000514778 ZNF142P52746 1687 aaPredicted RBP10.46□□□□□ -0.74
SMAD1-213ENST00000514778 CEP170BQ9Y4F5 1589 aaPredicted RBP10.45□□□□□ -0.74
SMAD1-213ENST00000514778 TRPM2O94759 1503 aa10.44□□□□□ -0.74
SMAD1-213ENST00000514778 IDI1Q13907 227 aa10.44□□□□□ -0.74
SMAD1-213ENST00000514778 PIK3C2BO00750 1634 aa10.44□□□□□ -0.74
SMAD1-213ENST00000514778 SYNMO15061 1565 aa10.43□□□□□ -0.74
SMAD1-213ENST00000514778 PLA2R1Q13018 1463 aa10.43□□□□□ -0.74
SMAD1-213ENST00000514778 UGGT1Q9NYU2 1555 aa10.43□□□□□ -0.74
SMAD1-213ENST00000514778 SPHKAPQ2M3C7 1700 aa10.41□□□□□ -0.74
SMAD1-213ENST00000514778 HDGFP51858 240 aaKnown RBP10.41□□□□□ -0.74
SMAD1-213ENST00000514778 NEURL4Q96JN8 1562 aa10.4□□□□□ -0.74
SMAD1-213ENST00000514778 ADGRB3O60242 1522 aa10.4□□□□□ -0.74
SMAD1-213ENST00000514778 PCGF6Q9BYE7 350 aa10.4□□□□□ -0.74
SMAD1-213ENST00000514778 FARP1Q9Y4F1 1045 aaPredicted RBP10.4□□□□□ -0.74
SMAD1-213ENST00000514778 CCDC144AA2RUR9 1427 aa10.4□□□□□ -0.75
SMAD1-213ENST00000514778 ANKRD30BQ9BXX2 1392 aa10.39□□□□□ -0.75
SMAD1-213ENST00000514778 SLIT1O75093 1534 aa10.39□□□□□ -0.75
SMAD1-213ENST00000514778 ARHGAP23Q9P227 1491 aa10.39□□□□□ -0.75
SMAD1-213ENST00000514778 TMEM2Q9UHN6 1383 aa10.39□□□□□ -0.75
SMAD1-213ENST00000514778 UBR1Q8IWV7 1749 aa10.38□□□□□ -0.75
SMAD1-213ENST00000514778 TMEM131LA2VDJ0 1609 aa10.38□□□□□ -0.75
SMAD1-213ENST00000514778 ANKLE2Q86XL3 938 aa10.38□□□□□ -0.75
SMAD1-213ENST00000514778 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMAD1-213ENST00000514778 RPGRIP1LQ68CZ1 1315 aa10.37□□□□□ -0.75
SMAD1-213ENST00000514778 EID1Q9Y6B2 187 aa10.37□□□□□ -0.75
SMAD1-213ENST00000514778 MED14O60244 1454 aa10.36□□□□□ -0.75
SMAD1-213ENST00000514778 HSPA2P54652 639 aa10.36□□□□□ -0.75
SMAD1-213ENST00000514778 PROM2Q8N271 834 aa10.36□□□□□ -0.75
SMAD1-213ENST00000514778 STAC3Q96MF2 364 aa10.36□□□□□ -0.75
SMAD1-213ENST00000514778 DHX57Q6P158 1386 aaKnown RBP10.36□□□□□ -0.75
SMAD1-213ENST00000514778 CLTCL1P53675 1640 aa10.36□□□□□ -0.75
SMAD1-213ENST00000514778 CREBZFQ9NS37 354 aa10.35□□□□□ -0.75
SMAD1-213ENST00000514778 CLSPNQ9HAW4 1339 aa10.34□□□□□ -0.75
SMAD1-213ENST00000514778 ZFYVE9O95405 1425 aa10.34□□□□□ -0.75
SMAD1-213ENST00000514778 SPATA31E1Q6ZUB1 1445 aa10.34□□□□□ -0.75
SMAD1-213ENST00000514778 TXNDC2Q86VQ3 553 aa10.34□□□□□ -0.75
SMAD1-213ENST00000514778 CFAP65Q6ZU64 1925 aaKnown RBP10.34□□□□□ -0.75
SMAD1-213ENST00000514778 SCAF11Q99590 1463 aaKnown RBP10.34□□□□□ -0.75
SMAD1-213ENST00000514778 CHGAP10645 457 aaKnown RBP10.33□□□□□ -0.76
SMAD1-213ENST00000514778 KIF1BO60333 1816 aa10.33□□□□□ -0.76
SMAD1-213ENST00000514778 RIMS2Q9UQ26 1411 aa10.33□□□□□ -0.76
SMAD1-213ENST00000514778 VGFO15240 615 aaPredicted RBP10.32□□□□□ -0.76
SMAD1-213ENST00000514778 CD44P16070 742 aaKnown RBP10.32□□□□□ -0.76
SMAD1-213ENST00000514778 LTKP29376 864 aa10.32□□□□□ -0.76
SMAD1-213ENST00000514778 STRCQ7RTU9 1775 aa10.31□□□□□ -0.76
SMAD1-213ENST00000514778 PLEKHG1Q9ULL1 1385 aa10.31□□□□□ -0.76
SMAD1-213ENST00000514778 POLR1AO95602 1720 aaPredicted RBP10.31□□□□□ -0.76
SMAD1-213ENST00000514778 ZNF326Q5BKZ1 582 aaKnown RBP10.31□□□□□ -0.76
SMAD1-213ENST00000514778 NPHP4O75161 1426 aaPredicted RBP10.31□□□□□ -0.76
SMAD1-213ENST00000514778 NCKAP5LQ9HCH0 1330 aa10.31□□□□□ -0.76
SMAD1-213ENST00000514778 NEXMIFQ5QGS0 1516 aa10.3□□□□□ -0.76
SMAD1-213ENST00000514778 PPP1R15AO75807 674 aaPredicted RBP10.3□□□□□ -0.76
SMAD1-213ENST00000514778 GABBR2O75899 941 aa10.28□□□□□ -0.76
SMAD1-213ENST00000514778 TBX22Q9Y458 520 aa10.28□□□□□ -0.76
SMAD1-213ENST00000514778 MYOM2P54296 1465 aa10.28□□□□□ -0.76
SMAD1-213ENST00000514778 PIK3R4Q99570 1358 aa10.27□□□□□ -0.76
SMAD1-213ENST00000514778 DIP2AQ14689 1571 aa10.27□□□□□ -0.76
SMAD1-213ENST00000514778 TIMELESSQ9UNS1 1208 aa10.27□□□□□ -0.77
SMAD1-213ENST00000514778 IQGAP1P46940 1657 aa10.27□□□□□ -0.77
SMAD1-213ENST00000514778 SETBP1Q9Y6X0 1596 aa10.26□□□□□ -0.77
SMAD1-213ENST00000514778 RGL3Q3MIN7 710 aa10.26□□□□□ -0.77
SMAD1-213ENST00000514778 MYO5BQ9ULV0 1848 aa10.26□□□□□ -0.77
SMAD1-213ENST00000514778 NRXN1Q9ULB1 1477 aa10.25□□□□□ -0.77
SMAD1-213ENST00000514778 CLCN6P51797 869 aa10.25□□□□□ -0.77
SMAD1-213ENST00000514778 IFT172Q9UG01 1749 aa10.24□□□□□ -0.77
SMAD1-213ENST00000514778 PPLO60437 1756 aa10.24□□□□□ -0.77
SMAD1-213ENST00000514778 ADAMTS13Q76LX8 1427 aa10.24□□□□□ -0.77
SMAD1-213ENST00000514778 DCAF11Q8TEB1 546 aa10.23□□□□□ -0.77
SMAD1-213ENST00000514778 BCANQ96GW7 911 aa10.23□□□□□ -0.77
SMAD1-213ENST00000514778 PIK3C2GO75747 1445 aa10.23□□□□□ -0.77
SMAD1-213ENST00000514778 KCNA6P17658 529 aa10.22□□□□□ -0.77
SMAD1-213ENST00000514778 SIN3AQ96ST3 1273 aa10.22□□□□□ -0.77
SMAD1-213ENST00000514778 CPS1P31327 1500 aa10.22□□□□□ -0.77
SMAD1-213ENST00000514778 CCER1Q8TC90 406 aaPredicted RBP10.21□□□□□ -0.77
SMAD1-213ENST00000514778 L3MBTL2Q969R5 705 aa10.21□□□□□ -0.77
SMAD1-213ENST00000514778 SLC26A8Q96RN1 970 aa10.21□□□□□ -0.77
SMAD1-213ENST00000514778 C14orf93Q9H972 538 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms