RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	MSH6	P52701	1360 aa		10.1	□□□□□ -0.79
RACK1-231	ENST00000514183	MYOM3	Q5VTT5	1437 aa		10.1	□□□□□ -0.79
RACK1-231	ENST00000514183	PROSER2	Q86WR7	435 aa	Predicted RBP	10.09	□□□□□ -0.79
RACK1-231	ENST00000514183	JCAD	Q9P266	1359 aa		10.09	□□□□□ -0.79
RACK1-231	ENST00000514183	TMEM2	Q9UHN6	1383 aa		10.09	□□□□□ -0.79
RACK1-231	ENST00000514183	NKTR	P30414	1462 aa	Known RBP	10.09	□□□□□ -0.79
RACK1-231	ENST00000514183	LTK	P29376	864 aa		10.08	□□□□□ -0.8
RACK1-231	ENST00000514183	ZNF772	Q68DY9	489 aa	Predicted RBP	10.08	□□□□□ -0.8
RACK1-231	ENST00000514183	TMEM94	Q12767	1356 aa		10.08	□□□□□ -0.8
RACK1-231	ENST00000514183	ROBO1	Q9Y6N7	1651 aa		10.08	□□□□□ -0.8
RACK1-231	ENST00000514183	ERBIN	Q96RT1	1412 aa		10.08	□□□□□ -0.8
RACK1-231	ENST00000514183	PRDM15	P57071	1507 aa	Predicted RBP	10.07	□□□□□ -0.8
RACK1-231	ENST00000514183	EFCAB6	Q5THR3	1501 aa		10.07	□□□□□ -0.8
RACK1-231	ENST00000514183	HRC	P23327	699 aa		10.07	□□□□□ -0.8
RACK1-231	ENST00000514183	POTEA	Q6S8J7	498 aa		10.07	□□□□□ -0.8
RACK1-231	ENST00000514183	SLC52A1	Q9NWF4	448 aa		10.07	□□□□□ -0.8
RACK1-231	ENST00000514183	SPATA31A6	Q5VVP1	1343 aa		10.06	□□□□□ -0.8
RACK1-231	ENST00000514183	NCOA3	Q9Y6Q9	1424 aa		10.06	□□□□□ -0.8
RACK1-231	ENST00000514183	PHLPP1	O60346	1717 aa		10.06	□□□□□ -0.8
RACK1-231	ENST00000514183	SLAIN2	Q9P270	581 aa		10.06	□□□□□ -0.8
RACK1-231	ENST00000514183	MROH1	Q8NDA8	1641 aa		10.05	□□□□□ -0.8
RACK1-231	ENST00000514183	BCAN	Q96GW7	911 aa		10.05	□□□□□ -0.8
RACK1-231	ENST00000514183	FGD6	Q6ZV73	1430 aa		10.05	□□□□□ -0.8
RACK1-231	ENST00000514183	MAP3K1	Q13233	1512 aa		10.05	□□□□□ -0.8
RACK1-231	ENST00000514183	PIK3C2B	O00750	1634 aa		10.05	□□□□□ -0.8
RACK1-231	ENST00000514183	MEX3C	Q5U5Q3	659 aa	Known RBP	10.04	□□□□□ -0.8
RACK1-231	ENST00000514183	KIF15	Q9NS87	1388 aa		10.04	□□□□□ -0.8
RACK1-231	ENST00000514183	NWD1	Q149M9	1564 aa		10.02	□□□□□ -0.8
RACK1-231	ENST00000514183	CADPS2	Q86UW7	1296 aa		10.02	□□□□□ -0.81
RACK1-231	ENST00000514183	TET3	O43151	1660 aa		10.02	□□□□□ -0.81
RACK1-231	ENST00000514183	LMTK2	Q8IWU2	1503 aa		10.02	□□□□□ -0.81
RACK1-231	ENST00000514183	IDI1	Q13907	227 aa		10.01	□□□□□ -0.81
RACK1-231	ENST00000514183	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
RACK1-231	ENST00000514183	CHD2	O14647	1828 aa	Known RBP	10.01	□□□□□ -0.81
RACK1-231	ENST00000514183	ANKRD30A	Q9BXX3	1397 aa		10.01	□□□□□ -0.81
RACK1-231	ENST00000514183	PPP1R15A	O75807	674 aa	Predicted RBP	10	□□□□□ -0.81
RACK1-231	ENST00000514183	SLC26A8	Q96RN1	970 aa		10	□□□□□ -0.81
RACK1-231	ENST00000514183	RPRD2	Q5VT52	1461 aa	Known RBP	10	□□□□□ -0.81
RACK1-231	ENST00000514183	CROCC2	H7BZ55	1655 aa		10	□□□□□ -0.81
RACK1-231	ENST00000514183	ATF3	P18847	181 aa		9.99	□□□□□ -0.81
RACK1-231	ENST00000514183	RXRB	P28702	533 aa		9.99	□□□□□ -0.81
RACK1-231	ENST00000514183	C14orf37	Q86TY3	774 aa		9.99	□□□□□ -0.81
RACK1-231	ENST00000514183	C19orf44	Q9H6X5	657 aa		9.99	□□□□□ -0.81
RACK1-231	ENST00000514183	ADGRB3	O60242	1522 aa		9.99	□□□□□ -0.81
RACK1-231	ENST00000514183	CDK12	Q9NYV4	1490 aa	Predicted RBP	9.99	□□□□□ -0.81
RACK1-231	ENST00000514183	SETD1A	O15047	1707 aa	Known RBP	9.99	□□□□□ -0.81
RACK1-231	ENST00000514183	UPF1	Q92900	1129 aa	Known RBP eCLIP	9.99	□□□□□ -0.81
RACK1-231	ENST00000514183	RRP7BP	Q9NSQ0	103 aa		9.99	□□□□□ -0.81
RACK1-231	ENST00000514183	TBX22	Q9Y458	520 aa		9.99	□□□□□ -0.81
RACK1-231	ENST00000514183	PIK3R4	Q99570	1358 aa		9.98	□□□□□ -0.81
RACK1-231	ENST00000514183	PLEKHG1	Q9ULL1	1385 aa		9.98	□□□□□ -0.81
RACK1-231	ENST00000514183	SHPRH	Q149N8	1683 aa		9.98	□□□□□ -0.81
RACK1-231	ENST00000514183	NOS1	P29475	1434 aa		9.97	□□□□□ -0.81
RACK1-231	ENST00000514183	RRBP1	Q9P2E9	1410 aa	Known RBP	9.97	□□□□□ -0.81
RACK1-231	ENST00000514183	COL16A1	Q07092	1604 aa	Predicted RBP	9.96	□□□□□ -0.81
RACK1-231	ENST00000514183	DIP2A	Q14689	1571 aa		9.96	□□□□□ -0.82
RACK1-231	ENST00000514183	AHDC1	Q5TGY3	1603 aa	Predicted RBP	9.95	□□□□□ -0.82
RACK1-231	ENST00000514183	ABCC5	O15440	1437 aa		9.95	□□□□□ -0.82
RACK1-231	ENST00000514183	PTPN23	Q9H3S7	1636 aa		9.95	□□□□□ -0.82
RACK1-231	ENST00000514183	DAPK1	P53355	1430 aa		9.94	□□□□□ -0.82
RACK1-231	ENST00000514183	SPDYE4	A6NLX3	237 aa		9.94	□□□□□ -0.82
RACK1-231	ENST00000514183	MKRN4P	Q13434	485 aa	Predicted RBP	9.94	□□□□□ -0.82
RACK1-231	ENST00000514183	TRIM52	Q96A61	297 aa		9.94	□□□□□ -0.82
RACK1-231	ENST00000514183	NGLY1	Q96IV0	654 aa		9.94	□□□□□ -0.82
RACK1-231	ENST00000514183	DCC	P43146	1447 aa		9.93	□□□□□ -0.82
RACK1-231	ENST00000514183	LRRC59	Q96AG4	307 aa	Known RBP	9.93	□□□□□ -0.82
RACK1-231	ENST00000514183	SPINK5	Q9NQ38	1064 aa	Predicted RBP	9.93	□□□□□ -0.82
RACK1-231	ENST00000514183	RIMS2	Q9UQ26	1411 aa		9.93	□□□□□ -0.82
RACK1-231	ENST00000514183	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	9.93	□□□□□ -0.82
RACK1-231	ENST00000514183	RBM33	Q96EV2	1170 aa	Known RBP	9.92	□□□□□ -0.82
RACK1-231	ENST00000514183	ZFYVE9	O95405	1425 aa		9.92	□□□□□ -0.82
RACK1-231	ENST00000514183	ZEB1	P37275	1124 aa	Predicted RBP	9.91	□□□□□ -0.82
RACK1-231	ENST00000514183	RBM6	P78332	1123 aa	Known RBP	9.91	□□□□□ -0.82
RACK1-231	ENST00000514183	CACNB1	Q02641	598 aa	Predicted RBP	9.91	□□□□□ -0.82
RACK1-231	ENST00000514183	MYO5B	Q9ULV0	1848 aa		9.91	□□□□□ -0.82
RACK1-231	ENST00000514183	CCER1	Q8TC90	406 aa	Predicted RBP	9.9	□□□□□ -0.82
RACK1-231	ENST00000514183	TRPM2	O94759	1503 aa		9.9	□□□□□ -0.82
RACK1-231	ENST00000514183	GCC2	Q8IWJ2	1684 aa		9.9	□□□□□ -0.82
RACK1-231	ENST00000514183	SETD5	Q9C0A6	1442 aa		9.89	□□□□□ -0.83
RACK1-231	ENST00000514183	TMEM131L	A2VDJ0	1609 aa		9.89	□□□□□ -0.83
RACK1-231	ENST00000514183	LRP6	O75581	1613 aa		9.89	□□□□□ -0.83
RACK1-231	ENST00000514183	FAM50A	Q14320	339 aa	Known RBP	9.89	□□□□□ -0.83
RACK1-231	ENST00000514183	CCDC125	Q86Z20	511 aa		9.89	□□□□□ -0.83
RACK1-231	ENST00000514183	ADGRL2	O95490	1459 aa		9.88	□□□□□ -0.83
RACK1-231	ENST00000514183	AFF2	P51816	1311 aa		9.88	□□□□□ -0.83
RACK1-231	ENST00000514183	ANKRD50	Q9ULJ7	1429 aa		9.88	□□□□□ -0.83
RACK1-231	ENST00000514183	NUTM2B	A6NNL0	878 aa	Predicted RBP	9.88	□□□□□ -0.83
RACK1-231	ENST00000514183	NUTM2E	B1AL46	878 aa	Predicted RBP	9.88	□□□□□ -0.83
RACK1-231	ENST00000514183	CHGA	P10645	457 aa	Known RBP	9.88	□□□□□ -0.83
RACK1-231	ENST00000514183	ITGAE	P38570	1179 aa		9.88	□□□□□ -0.83
RACK1-231	ENST00000514183	BRINP3	Q76B58	766 aa		9.88	□□□□□ -0.83
RACK1-231	ENST00000514183	NUTM2A	Q8IVF1	878 aa	Predicted RBP	9.88	□□□□□ -0.83
RACK1-231	ENST00000514183	QTRT2	Q9H974	415 aa	Known RBP	9.88	□□□□□ -0.83
RACK1-231	ENST00000514183	CHIC2	Q9UKJ5	165 aa		9.88	□□□□□ -0.83
RACK1-231	ENST00000514183	ATAD2	Q6PL18	1390 aa		9.87	□□□□□ -0.83
RACK1-231	ENST00000514183	ZRANB1	Q9UGI0	708 aa		9.87	□□□□□ -0.83
RACK1-231	ENST00000514183	AMOTL2	Q9Y2J4	779 aa		9.87	□□□□□ -0.83
RACK1-231	ENST00000514183	POLA2	Q14181	598 aa		9.86	□□□□□ -0.83
RACK1-231	ENST00000514183	NUTM2D	Q5VT03	806 aa	Predicted RBP	9.86	□□□□□ -0.83
RACK1-231	ENST00000514183	NHSL1	Q5SYE7	1610 aa		9.86	□□□□□ -0.83

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms