RNA–Protein interactions for RNA: ENST00000514094.5

APBB2-228, Transcript of amyloid beta precursor protein binding family B member 2, human

TSL 4

Gene APBB2, Length 856 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB2-228	ENST00000514094	KANK4	Q5T7N3	995 aa	Predicted RBP	13.97	□□□□□ -0.17
APBB2-228	ENST00000514094	MBD5	Q9P267	1494 aa		13.97	□□□□□ -0.17
APBB2-228	ENST00000514094	FER1L4	A9Z1Z3	1794 aa		13.96	□□□□□ -0.17
APBB2-228	ENST00000514094	CAMSAP2	Q08AD1	1489 aa		13.96	□□□□□ -0.17
APBB2-228	ENST00000514094	ILDR2	Q71H61	639 aa		13.96	□□□□□ -0.17
APBB2-228	ENST00000514094	MS4A3	Q96HJ5	214 aa		13.96	□□□□□ -0.17
APBB2-228	ENST00000514094	ABCA6	Q8N139	1617 aa		13.95	□□□□□ -0.18
APBB2-228	ENST00000514094	DHX29	Q7Z478	1369 aa	Known RBP	13.95	□□□□□ -0.18
APBB2-228	ENST00000514094	ARHGEF5	Q12774	1597 aa		13.94	□□□□□ -0.18
APBB2-228	ENST00000514094	GGT6	Q6P531	493 aa		13.94	□□□□□ -0.18
APBB2-228	ENST00000514094	SPATA31D1	Q6ZQQ2	1576 aa		13.94	□□□□□ -0.18
APBB2-228	ENST00000514094	ADGB	Q8N7X0	1667 aa		13.94	□□□□□ -0.18
APBB2-228	ENST00000514094	DISP3	Q9P2K9	1392 aa		13.94	□□□□□ -0.18
APBB2-228	ENST00000514094	CERK	Q8TCT0	537 aa		13.93	□□□□□ -0.18
APBB2-228	ENST00000514094	INO80	Q9ULG1	1556 aa	Predicted RBP	13.92	□□□□□ -0.18
APBB2-228	ENST00000514094	KIF3B	O15066	747 aa		13.91	□□□□□ -0.18
APBB2-228	ENST00000514094	MFRP	Q9BY79	579 aa		13.91	□□□□□ -0.18
APBB2-228	ENST00000514094	HAX1	O00165	279 aa		13.9	□□□□□ -0.18
APBB2-228	ENST00000514094	CABP2	Q9NPB3	220 aa		13.9	□□□□□ -0.18
APBB2-228	ENST00000514094	UHRF1BP1	Q6BDS2	1440 aa		13.9	□□□□□ -0.19
APBB2-228	ENST00000514094	ZMYM3	Q14202	1370 aa		13.89	□□□□□ -0.19
APBB2-228	ENST00000514094	SOCS7	O14512	581 aa		13.89	□□□□□ -0.19
APBB2-228	ENST00000514094	EFCAB3	Q8N7B9	438 aa		13.89	□□□□□ -0.19
APBB2-228	ENST00000514094	FAM135A	Q9P2D6	1515 aa		13.89	□□□□□ -0.19
APBB2-228	ENST00000514094	CEBPA	P49715	358 aa	Predicted RBP	13.88	□□□□□ -0.19
APBB2-228	ENST00000514094	NPAT	Q14207	1427 aa		13.88	□□□□□ -0.19
APBB2-228	ENST00000514094	WASHC2C	Q9Y4E1	1318 aa		13.88	□□□□□ -0.19
APBB2-228	ENST00000514094	PREX1	Q8TCU6	1659 aa		13.87	□□□□□ -0.19
APBB2-228	ENST00000514094	PLXNC1	O60486	1568 aa		13.87	□□□□□ -0.19
APBB2-228	ENST00000514094	FGD6	Q6ZV73	1430 aa		13.86	□□□□□ -0.19
APBB2-228	ENST00000514094	MAST1	Q9Y2H9	1570 aa		13.85	□□□□□ -0.19
APBB2-228	ENST00000514094	MROH2A	A6NES4	1674 aa		13.85	□□□□□ -0.19
APBB2-228	ENST00000514094	ANKRD30A	Q9BXX3	1397 aa		13.84	□□□□□ -0.19
APBB2-228	ENST00000514094	GALR2	O43603	387 aa	Predicted RBP	13.84	□□□□□ -0.19
APBB2-228	ENST00000514094	FAM50A	Q14320	339 aa	Known RBP	13.84	□□□□□ -0.19
APBB2-228	ENST00000514094	TMEM106C	Q9BVX2	250 aa		13.84	□□□□□ -0.19
APBB2-228	ENST00000514094	SHANK2	Q9UPX8	1470 aa		13.84	□□□□□ -0.19
APBB2-228	ENST00000514094	FBXO22	Q8NEZ5	403 aa		13.83	□□□□□ -0.2
APBB2-228	ENST00000514094	PTPN23	Q9H3S7	1636 aa		13.82	□□□□□ -0.2
APBB2-228	ENST00000514094	STRC	Q7RTU9	1775 aa		13.82	□□□□□ -0.2
APBB2-228	ENST00000514094	PHF8	Q9UPP1	1060 aa		13.82	□□□□□ -0.2
APBB2-228	ENST00000514094	KANK1	Q14678	1352 aa		13.82	□□□□□ -0.2
APBB2-228	ENST00000514094	TCOF1	Q13428	1488 aa	Known RBP	13.81	□□□□□ -0.2
APBB2-228	ENST00000514094	DUOX2	Q9NRD8	1548 aa		13.81	□□□□□ -0.2
APBB2-228	ENST00000514094	PPP1R37	O75864	691 aa		13.8	□□□□□ -0.2
APBB2-228	ENST00000514094	RYDEN	Q9NUL5	291 aa	Known RBP	13.8	□□□□□ -0.2
APBB2-228	ENST00000514094	KIF15	Q9NS87	1388 aa		13.8	□□□□□ -0.2
APBB2-228	ENST00000514094	DAPK1	P53355	1430 aa		13.8	□□□□□ -0.2
APBB2-228	ENST00000514094	C3	P01024	1663 aa		13.79	□□□□□ -0.2
APBB2-228	ENST00000514094	RRP7BP	Q9NSQ0	103 aa		13.79	□□□□□ -0.2
APBB2-228	ENST00000514094	ABCC5	O15440	1437 aa		13.79	□□□□□ -0.2
APBB2-228	ENST00000514094	ERBIN	Q96RT1	1412 aa		13.79	□□□□□ -0.2
APBB2-228	ENST00000514094	KDM5D	Q9BY66	1539 aa		13.78	□□□□□ -0.2
APBB2-228	ENST00000514094	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.78	□□□□□ -0.2
APBB2-228	ENST00000514094	CADPS2	Q86UW7	1296 aa		13.77	□□□□□ -0.21
APBB2-228	ENST00000514094	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.77	□□□□□ -0.21
APBB2-228	ENST00000514094	CLTC	Q00610	1675 aa	Known RBP	13.76	□□□□□ -0.21
APBB2-228	ENST00000514094	DNMT1	P26358	1616 aa	Known RBP	13.76	□□□□□ -0.21
APBB2-228	ENST00000514094	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
APBB2-228	ENST00000514094	TTLL13P	A6NNM8	815 aa		13.76	□□□□□ -0.21
APBB2-228	ENST00000514094	SOX12	O15370	315 aa		13.76	□□□□□ -0.21
APBB2-228	ENST00000514094	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.76	□□□□□ -0.21
APBB2-228	ENST00000514094	PTPRK	Q15262	1439 aa		13.75	□□□□□ -0.21
APBB2-228	ENST00000514094	MS4A4A	Q96JQ5	239 aa		13.75	□□□□□ -0.21
APBB2-228	ENST00000514094	CHIC2	Q9UKJ5	165 aa		13.75	□□□□□ -0.21
APBB2-228	ENST00000514094	TNR	Q92752	1358 aa		13.74	□□□□□ -0.21
APBB2-228	ENST00000514094	TIE1	P35590	1138 aa		13.74	□□□□□ -0.21
APBB2-228	ENST00000514094	LTBP4	Q8N2S1	1624 aa		13.74	□□□□□ -0.21
APBB2-228	ENST00000514094	PZP	P20742	1482 aa		13.74	□□□□□ -0.21
APBB2-228	ENST00000514094	NCOA1	Q15788	1441 aa		13.73	□□□□□ -0.21
APBB2-228	ENST00000514094	ZC3H13	Q5T200	1668 aa	Known RBP	13.72	□□□□□ -0.21
APBB2-228	ENST00000514094	NLRP6	P59044	892 aa		13.72	□□□□□ -0.21
APBB2-228	ENST00000514094	PTPRT	O14522	1441 aa		13.72	□□□□□ -0.21
APBB2-228	ENST00000514094	RNF17	Q9BXT8	1623 aa	Known RBP	13.72	□□□□□ -0.21
APBB2-228	ENST00000514094	NLRP1	Q9C000	1473 aa		13.71	□□□□□ -0.21
APBB2-228	ENST00000514094	CROCC2	H7BZ55	1655 aa		13.71	□□□□□ -0.21
APBB2-228	ENST00000514094	A2ML1	A8K2U0	1454 aa		13.7	□□□□□ -0.22
APBB2-228	ENST00000514094	ADGRL2	O95490	1459 aa		13.7	□□□□□ -0.22
APBB2-228	ENST00000514094	ANKLE2	Q86XL3	938 aa		13.7	□□□□□ -0.22
APBB2-228	ENST00000514094	ROCK1	Q13464	1354 aa		13.7	□□□□□ -0.22
APBB2-228	ENST00000514094	PLA2R1	Q13018	1463 aa		13.69	□□□□□ -0.22
APBB2-228	ENST00000514094	ANKRD50	Q9ULJ7	1429 aa		13.69	□□□□□ -0.22
APBB2-228	ENST00000514094	IQSEC2	Q5JU85	1478 aa		13.68	□□□□□ -0.22
APBB2-228	ENST00000514094	ARHGAP31	Q2M1Z3	1444 aa		13.68	□□□□□ -0.22
APBB2-228	ENST00000514094	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.68	□□□□□ -0.22
APBB2-228	ENST00000514094	ABCC3	O15438	1527 aa		13.67	□□□□□ -0.22
APBB2-228	ENST00000514094	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.66	□□□□□ -0.22
APBB2-228	ENST00000514094	ACIN1	Q9UKV3	1341 aa	Known RBP	13.66	□□□□□ -0.22
APBB2-228	ENST00000514094	HDGF	P51858	240 aa	Known RBP	13.66	□□□□□ -0.22
APBB2-228	ENST00000514094	CAMSAP1	Q5T5Y3	1602 aa		13.65	□□□□□ -0.22
APBB2-228	ENST00000514094	GOLGA2	Q08379	1002 aa		13.65	□□□□□ -0.22
APBB2-228	ENST00000514094	SLC52A1	Q9NWF4	448 aa		13.65	□□□□□ -0.22
APBB2-228	ENST00000514094	TRIM35	Q9UPQ4	493 aa		13.65	□□□□□ -0.22
APBB2-228	ENST00000514094	ZNF142	P52746	1687 aa	Predicted RBP	13.65	□□□□□ -0.22
APBB2-228	ENST00000514094	PRDM15	P57071	1507 aa	Predicted RBP	13.64	□□□□□ -0.23
APBB2-228	ENST00000514094	MYO3A	Q8NEV4	1616 aa		13.64	□□□□□ -0.23
APBB2-228	ENST00000514094	ITGAE	P38570	1179 aa		13.64	□□□□□ -0.23
APBB2-228	ENST00000514094	ATN1	P54259	1190 aa	Predicted RBP	13.64	□□□□□ -0.23
APBB2-228	ENST00000514094	EID1	Q9Y6B2	187 aa		13.64	□□□□□ -0.23
APBB2-228	ENST00000514094	GABBR2	O75899	941 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms