RNA–Protein interactions for RNA: ENST00000513895.1

LINC00616-204, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-204ENST00000513895 DNAJB2P25686 324 aa11.36□□□□□ -0.59
LINC00616-204ENST00000513895 LCE2BO14633 110 aa11.35□□□□□ -0.59
LINC00616-204ENST00000513895 ZPR1O75312 459 aa11.35□□□□□ -0.59
LINC00616-204ENST00000513895 P3H3Q8IVL6 736 aa11.34□□□□□ -0.59
LINC00616-204ENST00000513895 RBM46Q8TBY0 533 aaKnown RBP11.34□□□□□ -0.59
LINC00616-204ENST00000513895 PCDHB3Q9Y5E6 796 aa11.34□□□□□ -0.59
LINC00616-204ENST00000513895 ADGRG1Q9Y653 693 aa11.34□□□□□ -0.59
LINC00616-204ENST00000513895 RB1CC1Q8TDY2 1594 aa11.33□□□□□ -0.6
LINC00616-204ENST00000513895 GGCXP38435 758 aa11.33□□□□□ -0.6
LINC00616-204ENST00000513895 TMEM134Q9H6X4 195 aa11.33□□□□□ -0.6
LINC00616-204ENST00000513895 NRG2O14511 850 aaPredicted RBP11.32□□□□□ -0.6
LINC00616-204ENST00000513895 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
LINC00616-204ENST00000513895 BLOC1S3Q6QNY0 202 aa11.3□□□□□ -0.6
LINC00616-204ENST00000513895 TMUB1Q9BVT8 246 aa11.3□□□□□ -0.6
LINC00616-204ENST00000513895 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
LINC00616-204ENST00000513895 RCCD1A6NED2 376 aa11.28□□□□□ -0.6
LINC00616-204ENST00000513895 FAM161AQ3B820 660 aa11.28□□□□□ -0.6
LINC00616-204ENST00000513895 SEMA3EO15041 775 aa11.27□□□□□ -0.61
LINC00616-204ENST00000513895 TLL1O43897 1013 aa11.26□□□□□ -0.61
LINC00616-204ENST00000513895 FCHSD2O94868 740 aa11.26□□□□□ -0.61
LINC00616-204ENST00000513895 KMT5BQ4FZB7 885 aa11.26□□□□□ -0.61
LINC00616-204ENST00000513895 ACTN4O43707 911 aaKnown RBP11.25□□□□□ -0.61
LINC00616-204ENST00000513895 CFHP08603 1231 aa11.25□□□□□ -0.61
LINC00616-204ENST00000513895 PDZRN3Q9UPQ7 1066 aa11.24□□□□□ -0.61
LINC00616-204ENST00000513895 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.23□□□□□ -0.61
LINC00616-204ENST00000513895 RNF223E7ERA6 249 aa11.23□□□□□ -0.61
LINC00616-204ENST00000513895 SLC10A3P09131 477 aa11.22□□□□□ -0.61
LINC00616-204ENST00000513895 PXYLP1Q8TE99 480 aa11.21□□□□□ -0.61
LINC00616-204ENST00000513895 EMID1Q96A84 441 aaPredicted RBP11.19□□□□□ -0.62
LINC00616-204ENST00000513895 OATP04181 439 aa11.18□□□□□ -0.62
LINC00616-204ENST00000513895 HIC1Q14526 733 aa11.18□□□□□ -0.62
LINC00616-204ENST00000513895 ANKLE1Q8NAG6 615 aa11.18□□□□□ -0.62
LINC00616-204ENST00000513895 S1PR4O95977 384 aa11.17□□□□□ -0.62
LINC00616-204ENST00000513895 SLC19A1P41440 591 aa11.17□□□□□ -0.62
LINC00616-204ENST00000513895 ADH1BP00325 375 aa11.16□□□□□ -0.62
LINC00616-204ENST00000513895 TRIM67Q6ZTA4 783 aa11.16□□□□□ -0.62
LINC00616-204ENST00000513895 METTL3Q86U44 580 aaKnown RBP11.16□□□□□ -0.62
LINC00616-204ENST00000513895 TESPA1A2RU30 521 aaPredicted RBP11.15□□□□□ -0.62
LINC00616-204ENST00000513895 NR1I2O75469 434 aa11.15□□□□□ -0.62
LINC00616-204ENST00000513895 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
LINC00616-204ENST00000513895 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
LINC00616-204ENST00000513895 PPEF1O14829 653 aaPredicted RBP11.14□□□□□ -0.63
LINC00616-204ENST00000513895 SPRYD7Q5W111 196 aa11.14□□□□□ -0.63
LINC00616-204ENST00000513895 ZNF598Q86UK7 904 aaKnown RBP11.12□□□□□ -0.63
LINC00616-204ENST00000513895 UNC13AQ9UPW8 1703 aa11.12□□□□□ -0.63
LINC00616-204ENST00000513895 GPR37O15354 613 aa11.11□□□□□ -0.63
LINC00616-204ENST00000513895 GNPATO15228 680 aa11.1□□□□□ -0.63
LINC00616-204ENST00000513895 FECHP22830 423 aa11.1□□□□□ -0.63
LINC00616-204ENST00000513895 RSPH4AQ5TD94 716 aa11.1□□□□□ -0.63
LINC00616-204ENST00000513895 SMYD5Q6GMV2 418 aa11.1□□□□□ -0.63
LINC00616-204ENST00000513895 LIAT1Q6ZQX7 453 aa11.1□□□□□ -0.63
LINC00616-204ENST00000513895 SLC6A16Q9GZN6 736 aa11.1□□□□□ -0.63
LINC00616-204ENST00000513895 SCRIBQ14160 1630 aa11.09□□□□□ -0.63
LINC00616-204ENST00000513895 PRR20EP86478 221 aa11.09□□□□□ -0.63
LINC00616-204ENST00000513895 PRR20CP86479 221 aa11.09□□□□□ -0.63
LINC00616-204ENST00000513895 PRR20DP86480 221 aa11.09□□□□□ -0.63
LINC00616-204ENST00000513895 PRR20BP86481 221 aa11.09□□□□□ -0.63
LINC00616-204ENST00000513895 PRR20AP86496 221 aa11.09□□□□□ -0.63
LINC00616-204ENST00000513895 PUS10Q3MIT2 529 aaKnown RBP11.09□□□□□ -0.63
LINC00616-204ENST00000513895 SCUBE3Q8IX30 993 aa11.09□□□□□ -0.63
LINC00616-204ENST00000513895 ZNF697Q5TEC3 545 aa11.07□□□□□ -0.64
LINC00616-204ENST00000513895 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
LINC00616-204ENST00000513895 PLA2G2CQ5R387 149 aa11.06□□□□□ -0.64
LINC00616-204ENST00000513895 ZNF787Q6DD87 383 aa11.06□□□□□ -0.64
LINC00616-204ENST00000513895 PRKCSHP14314 528 aaPredicted RBP11.05□□□□□ -0.64
LINC00616-204ENST00000513895 PKDCCQ504Y2 493 aa11.05□□□□□ -0.64
LINC00616-204ENST00000513895 SPSB2Q99619 263 aa11.05□□□□□ -0.64
LINC00616-204ENST00000513895 DAXXQ9UER7 740 aaPredicted RBP11.05□□□□□ -0.64
LINC00616-204ENST00000513895 RDH13Q8NBN7 331 aa11.04□□□□□ -0.64
LINC00616-204ENST00000513895 GDF9O60383 454 aa11.03□□□□□ -0.64
LINC00616-204ENST00000513895 BICRAQ9NZM4 1560 aa11.03□□□□□ -0.64
LINC00616-204ENST00000513895 DDX11L8A8MPP1 907 aa11.02□□□□□ -0.65
LINC00616-204ENST00000513895 DGAT1O75907 488 aa11.02□□□□□ -0.65
LINC00616-204ENST00000513895 BCANQ96GW7 911 aa11.02□□□□□ -0.65
LINC00616-204ENST00000513895 TNFRSF10AO00220 468 aa11.01□□□□□ -0.65
LINC00616-204ENST00000513895 MYT1Q01538 1121 aa11.01□□□□□ -0.65
LINC00616-204ENST00000513895 FUT2Q10981 343 aa11.01□□□□□ -0.65
LINC00616-204ENST00000513895 MORN1Q5T089 497 aa11.01□□□□□ -0.65
LINC00616-204ENST00000513895 NLRP7Q8WX94 980 aa11.01□□□□□ -0.65
LINC00616-204ENST00000513895 PHOX2BQ99453 314 aa10.99□□□□□ -0.65
LINC00616-204ENST00000513895 SHROOM4Q9ULL8 1493 aa10.99□□□□□ -0.65
LINC00616-204ENST00000513895 FAM187AA6NFU0 413 aa10.98□□□□□ -0.65
LINC00616-204ENST00000513895 ATP6V1AP38606 617 aa10.98□□□□□ -0.65
LINC00616-204ENST00000513895 SULF1Q8IWU6 871 aa10.98□□□□□ -0.65
LINC00616-204ENST00000513895 THAP11Q96EK4 314 aa10.98□□□□□ -0.65
LINC00616-204ENST00000513895 GCGRP47871 477 aa10.97□□□□□ -0.65
LINC00616-204ENST00000513895 GPIHBP1Q8IV16 184 aa10.97□□□□□ -0.65
LINC00616-204ENST00000513895 SLC27A5Q9Y2P5 690 aa10.96□□□□□ -0.65
LINC00616-204ENST00000513895 LMOD2Q6P5Q4 547 aa10.95□□□□□ -0.66
LINC00616-204ENST00000513895 FCF1Q9Y324 198 aaKnown RBP10.95□□□□□ -0.66
LINC00616-204ENST00000513895 FMNL1O95466 1100 aaPredicted RBP10.94□□□□□ -0.66
LINC00616-204ENST00000513895 RPIAP49247 311 aa10.94□□□□□ -0.66
LINC00616-204ENST00000513895 ZNF775Q96BV0 537 aaPredicted RBP10.94□□□□□ -0.66
LINC00616-204ENST00000513895 PKD2L1Q9P0L9 805 aa10.94□□□□□ -0.66
LINC00616-204ENST00000513895 FAM160A2Q8N612 972 aaPredicted RBP10.93□□□□□ -0.66
LINC00616-204ENST00000513895 SALL2Q9Y467 1007 aaPredicted RBP10.93□□□□□ -0.66
LINC00616-204ENST00000513895 PRDM9Q9NQV7 894 aa10.92□□□□□ -0.66
LINC00616-204ENST00000513895 FOXC1Q12948 553 aa10.91□□□□□ -0.66
LINC00616-204ENST00000513895 BRICD5Q6PL45 260 aa10.9□□□□□ -0.66
LINC00616-204ENST00000513895 MSS51Q4VC12 460 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms