RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 POTECB2RU33 542 aa9.15□□□□□ -0.94
CLDND1-228ENST00000513873 SLC19A1P41440 591 aa9.15□□□□□ -0.94
CLDND1-228ENST00000513873 HIC1Q14526 733 aa9.14□□□□□ -0.95
CLDND1-228ENST00000513873 CDHR5Q9HBB8 845 aa9.14□□□□□ -0.95
CLDND1-228ENST00000513873 INSM1Q01101 510 aaPredicted RBP9.13□□□□□ -0.95
CLDND1-228ENST00000513873 PTGDRQ13258 359 aa9.13□□□□□ -0.95
CLDND1-228ENST00000513873 NKX2-3Q8TAU0 364 aa9.13□□□□□ -0.95
CLDND1-228ENST00000513873 FAM187AA6NFU0 413 aa9.12□□□□□ -0.95
CLDND1-228ENST00000513873 GNPATO15228 680 aa9.12□□□□□ -0.95
CLDND1-228ENST00000513873 PRSS12P56730 875 aa9.12□□□□□ -0.95
CLDND1-228ENST00000513873 KRI1Q8N9T8 703 aaKnown RBP9.12□□□□□ -0.95
CLDND1-228ENST00000513873 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
CLDND1-228ENST00000513873 PRR20EP86478 221 aa9.11□□□□□ -0.95
CLDND1-228ENST00000513873 PRR20CP86479 221 aa9.11□□□□□ -0.95
CLDND1-228ENST00000513873 PRR20DP86480 221 aa9.11□□□□□ -0.95
CLDND1-228ENST00000513873 PRR20BP86481 221 aa9.11□□□□□ -0.95
CLDND1-228ENST00000513873 PRR20AP86496 221 aa9.11□□□□□ -0.95
CLDND1-228ENST00000513873 CDCA7LQ96GN5 454 aa9.11□□□□□ -0.95
CLDND1-228ENST00000513873 WFS1O76024 890 aa9.1□□□□□ -0.95
CLDND1-228ENST00000513873 TRIM67Q6ZTA4 783 aa9.1□□□□□ -0.95
CLDND1-228ENST00000513873 ZC3H15Q8WU90 426 aaKnown RBP9.1□□□□□ -0.95
CLDND1-228ENST00000513873 RBM27Q9P2N5 1060 aaKnown RBP9.1□□□□□ -0.95
CLDND1-228ENST00000513873 NBPF26B4DH59 902 aa9.09□□□□□ -0.95
CLDND1-228ENST00000513873 SLC4A3P48751 1232 aa9.09□□□□□ -0.95
CLDND1-228ENST00000513873 APLP1P51693 650 aa9.09□□□□□ -0.95
CLDND1-228ENST00000513873 COPS2P61201 443 aa9.09□□□□□ -0.95
CLDND1-228ENST00000513873 ZNF598Q86UK7 904 aaKnown RBP9.09□□□□□ -0.95
CLDND1-228ENST00000513873 NPDC1Q9NQX5 325 aaPredicted RBP9.09□□□□□ -0.95
CLDND1-228ENST00000513873 SMAPO00193 183 aa9.08□□□□□ -0.96
CLDND1-228ENST00000513873 LCE2AQ5TA79 106 aaPredicted RBP9.08□□□□□ -0.96
CLDND1-228ENST00000513873 TPRNQ4KMQ1 711 aa9.07□□□□□ -0.96
CLDND1-228ENST00000513873 PADI6Q6TGC4 694 aa9.07□□□□□ -0.96
CLDND1-228ENST00000513873 SPRYD7Q5W111 196 aa9.06□□□□□ -0.96
CLDND1-228ENST00000513873 PNMA3Q9UL41 463 aa9.06□□□□□ -0.96
CLDND1-228ENST00000513873 ZPR1O75312 459 aa9.05□□□□□ -0.96
CLDND1-228ENST00000513873 ZMYND10O75800 440 aa9.04□□□□□ -0.96
CLDND1-228ENST00000513873 TATDN2Q93075 761 aa9.04□□□□□ -0.96
CLDND1-228ENST00000513873 PRR14Q9BWN1 585 aa9.04□□□□□ -0.96
CLDND1-228ENST00000513873 MINK1Q8N4C8 1332 aaPredicted RBP9.04□□□□□ -0.96
CLDND1-228ENST00000513873 RNF223E7ERA6 249 aa9.03□□□□□ -0.96
CLDND1-228ENST00000513873 GPR37O15354 613 aa9.03□□□□□ -0.96
CLDND1-228ENST00000513873 OATP04181 439 aa9.03□□□□□ -0.96
CLDND1-228ENST00000513873 MAP2K5Q13163 448 aa9.03□□□□□ -0.96
CLDND1-228ENST00000513873 ZNF697Q5TEC3 545 aa9.03□□□□□ -0.96
CLDND1-228ENST00000513873 BARGINQ6ZT62 677 aa9.03□□□□□ -0.96
CLDND1-228ENST00000513873 RBM46Q8TBY0 533 aaKnown RBP9.03□□□□□ -0.96
CLDND1-228ENST00000513873 SLF2Q8IX21 1173 aa9.02□□□□□ -0.97
CLDND1-228ENST00000513873 AAASQ9NRG9 546 aa9.02□□□□□ -0.97
CLDND1-228ENST00000513873 TNFRSF10AO00220 468 aa9.01□□□□□ -0.97
CLDND1-228ENST00000513873 ST8SIA5O15466 376 aa9.01□□□□□ -0.97
CLDND1-228ENST00000513873 NUDT18Q6ZVK8 323 aa9.01□□□□□ -0.97
CLDND1-228ENST00000513873 FAM181BA6NEQ2 426 aa9□□□□□ -0.97
CLDND1-228ENST00000513873 FECHP22830 423 aa9□□□□□ -0.97
CLDND1-228ENST00000513873 TTC13Q8NBP0 860 aa9□□□□□ -0.97
CLDND1-228ENST00000513873 IRF6O14896 467 aa8.99□□□□□ -0.97
CLDND1-228ENST00000513873 WIPF1O43516 503 aa8.99□□□□□ -0.97
CLDND1-228ENST00000513873 ANKLE1Q8NAG6 615 aa8.99□□□□□ -0.97
CLDND1-228ENST00000513873 C11orf95C9JLR9 678 aaPredicted RBP8.98□□□□□ -0.97
CLDND1-228ENST00000513873 ADGRG1Q9Y653 693 aa8.98□□□□□ -0.97
CLDND1-228ENST00000513873 AK7Q96M32 723 aa8.97□□□□□ -0.97
CLDND1-228ENST00000513873 FAM198AQ9UFP1 575 aa8.97□□□□□ -0.97
CLDND1-228ENST00000513873 PCDHB3Q9Y5E6 796 aa8.97□□□□□ -0.97
CLDND1-228ENST00000513873 FAM161AQ3B820 660 aa8.96□□□□□ -0.98
CLDND1-228ENST00000513873 LOC100996750A0A140TA64 210 aa8.95□□□□□ -0.98
CLDND1-228ENST00000513873 GDF9O60383 454 aa8.95□□□□□ -0.98
CLDND1-228ENST00000513873 CCDC102AQ96A19 550 aa8.95□□□□□ -0.98
CLDND1-228ENST00000513873 KRTAP4-6Q9BYQ5 205 aa8.95□□□□□ -0.98
CLDND1-228ENST00000513873 SLC24A3Q9HC58 644 aa8.95□□□□□ -0.98
CLDND1-228ENST00000513873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.94□□□□□ -0.98
CLDND1-228ENST00000513873 DNAJB2P25686 324 aa8.94□□□□□ -0.98
CLDND1-228ENST00000513873 METTL3Q86U44 580 aaKnown RBP8.93□□□□□ -0.98
CLDND1-228ENST00000513873 CRIPAKQ8N1N5 446 aa8.93□□□□□ -0.98
CLDND1-228ENST00000513873 PXYLP1Q8TE99 480 aa8.93□□□□□ -0.98
CLDND1-228ENST00000513873 EMID1Q96A84 441 aaPredicted RBP8.93□□□□□ -0.98
CLDND1-228ENST00000513873 EYA1Q99502 592 aa8.93□□□□□ -0.98
CLDND1-228ENST00000513873 RCCD1A6NED2 376 aa8.92□□□□□ -0.98
CLDND1-228ENST00000513873 NFX1Q12986 1120 aaKnown RBP8.92□□□□□ -0.98
CLDND1-228ENST00000513873 SWT1Q5T5J6 900 aaKnown RBP8.92□□□□□ -0.98
CLDND1-228ENST00000513873 LIAT1Q6ZQX7 453 aa8.92□□□□□ -0.98
CLDND1-228ENST00000513873 AXIN1O15169 862 aa8.91□□□□□ -0.98
CLDND1-228ENST00000513873 PRKCSHP14314 528 aaPredicted RBP8.91□□□□□ -0.98
CLDND1-228ENST00000513873 RSPH4AQ5TD94 716 aa8.91□□□□□ -0.98
CLDND1-228ENST00000513873 GMPR2Q9P2T1 348 aaKnown RBP8.9□□□□□ -0.98
CLDND1-228ENST00000513873 TTLL12Q14166 644 aaPredicted RBP8.89□□□□□ -0.99
CLDND1-228ENST00000513873 CTC1Q2NKJ3 1217 aa8.89□□□□□ -0.99
CLDND1-228ENST00000513873 BLOC1S3Q6QNY0 202 aa8.89□□□□□ -0.99
CLDND1-228ENST00000513873 C3orf80F5H4A9 247 aa8.88□□□□□ -0.99
CLDND1-228ENST00000513873 PPEF1O14829 653 aaPredicted RBP8.88□□□□□ -0.99
CLDND1-228ENST00000513873 TRIM66O15016 1216 aa8.88□□□□□ -0.99
CLDND1-228ENST00000513873 S1PR4O95977 384 aa8.88□□□□□ -0.99
CLDND1-228ENST00000513873 CLCN1P35523 988 aa8.88□□□□□ -0.99
CLDND1-228ENST00000513873 FOXC1Q12948 553 aa8.88□□□□□ -0.99
CLDND1-228ENST00000513873 TMEM134Q9H6X4 195 aa8.87□□□□□ -0.99
CLDND1-228ENST00000513873 DAXXQ9UER7 740 aaPredicted RBP8.87□□□□□ -0.99
CLDND1-228ENST00000513873 MDM2Q00987 491 aaPredicted RBP8.86□□□□□ -0.99
CLDND1-228ENST00000513873 SULF1Q8IWU6 871 aa8.86□□□□□ -0.99
CLDND1-228ENST00000513873 TLL1O43897 1013 aa8.85□□□□□ -0.99
CLDND1-228ENST00000513873 GPCPD1Q9NPB8 672 aa8.85□□□□□ -0.99
CLDND1-228ENST00000513873 PDE4DQ08499 809 aa8.84□□□□□ -0.99
CLDND1-228ENST00000513873 AMHR2Q16671 573 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms