RNA–Protein interactions for RNA: ENST00000512517.1

LINC01258-201, Transcript of long intergenic non-protein coding RNA 1258, humanhuman

TSL 2 BASIC

Gene LINC01258, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01258-201ENST00000512517 B4GALNT3Q6L9W6 998 aa11.7□□□□□ -0.54
LINC01258-201ENST00000512517 GGT6Q6P531 493 aa11.7□□□□□ -0.54
LINC01258-201ENST00000512517 NAP1L5Q96NT1 182 aaPredicted RBP11.7□□□□□ -0.54
LINC01258-201ENST00000512517 PNNQ9H307 717 aaKnown RBP11.69□□□□□ -0.54
LINC01258-201ENST00000512517 CEP152O94986 1710 aa11.69□□□□□ -0.54
LINC01258-201ENST00000512517 PDCL3Q9H2J4 239 aa11.68□□□□□ -0.54
LINC01258-201ENST00000512517 PRDM15P57071 1507 aaPredicted RBP11.68□□□□□ -0.54
LINC01258-201ENST00000512517 L3MBTL2Q969R5 705 aa11.67□□□□□ -0.54
LINC01258-201ENST00000512517 DDRGK1Q96HY6 314 aa11.67□□□□□ -0.54
LINC01258-201ENST00000512517 E9PCH4 1651 aa11.67□□□□□ -0.54
LINC01258-201ENST00000512517 MROH1Q8NDA8 1641 aa11.67□□□□□ -0.54
LINC01258-201ENST00000512517 ZMYM4Q5VZL5 1548 aa11.67□□□□□ -0.54
LINC01258-201ENST00000512517 TET3O43151 1660 aa11.67□□□□□ -0.54
LINC01258-201ENST00000512517 DDX10Q13206 875 aaKnown RBP11.66□□□□□ -0.54
LINC01258-201ENST00000512517 RNF17Q9BXT8 1623 aaKnown RBP11.66□□□□□ -0.54
LINC01258-201ENST00000512517 CCDC144AA2RUR9 1427 aa11.66□□□□□ -0.54
LINC01258-201ENST00000512517 COL17A1Q9UMD9 1497 aaPredicted RBP11.66□□□□□ -0.54
LINC01258-201ENST00000512517 NCLP19338 710 aaKnown RBP11.65□□□□□ -0.54
LINC01258-201ENST00000512517 PLPPR3Q6T4P5 718 aa11.65□□□□□ -0.54
LINC01258-201ENST00000512517 RRAGDQ9NQL2 400 aaPredicted RBP11.65□□□□□ -0.54
LINC01258-201ENST00000512517 NAP1L2Q9ULW6 460 aaPredicted RBP11.65□□□□□ -0.54
LINC01258-201ENST00000512517 CLCN1P35523 988 aa11.64□□□□□ -0.55
LINC01258-201ENST00000512517 HNRNPUQ00839 825 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC01258-201ENST00000512517 SPHKAPQ2M3C7 1700 aa11.64□□□□□ -0.55
LINC01258-201ENST00000512517 VWDEQ8N2E2 1590 aa11.64□□□□□ -0.55
LINC01258-201ENST00000512517 NFKBIBQ15653 356 aa11.64□□□□□ -0.55
LINC01258-201ENST00000512517 BCORL1Q5H9F3 1711 aa11.63□□□□□ -0.55
LINC01258-201ENST00000512517 ATP10AO60312 1499 aa11.63□□□□□ -0.55
LINC01258-201ENST00000512517 PLA2R1Q13018 1463 aa11.63□□□□□ -0.55
LINC01258-201ENST00000512517 TPM2P07951 284 aa11.63□□□□□ -0.55
LINC01258-201ENST00000512517 RGL3Q3MIN7 710 aa11.63□□□□□ -0.55
LINC01258-201ENST00000512517 IPO4Q8TEX9 1081 aaKnown RBP11.63□□□□□ -0.55
LINC01258-201ENST00000512517 L1TD1Q5T7N2 865 aaKnown RBP11.62□□□□□ -0.55
LINC01258-201ENST00000512517 DCAF11Q8TEB1 546 aa11.61□□□□□ -0.55
LINC01258-201ENST00000512517 KDM2AQ9Y2K7 1162 aa11.61□□□□□ -0.55
LINC01258-201ENST00000512517 EFCAB6Q5THR3 1501 aa11.61□□□□□ -0.55
LINC01258-201ENST00000512517 BBXQ8WY36 941 aaPredicted RBP11.61□□□□□ -0.55
LINC01258-201ENST00000512517 MLECQ14165 292 aa11.6□□□□□ -0.55
LINC01258-201ENST00000512517 HIRIP3Q9BW71 556 aaPredicted RBP11.6□□□□□ -0.55
LINC01258-201ENST00000512517 ARHGEF40Q8TER5 1519 aa11.6□□□□□ -0.55
LINC01258-201ENST00000512517 CAMSAP1Q5T5Y3 1602 aa11.59□□□□□ -0.55
LINC01258-201ENST00000512517 ABCC3O15438 1527 aa11.59□□□□□ -0.55
LINC01258-201ENST00000512517 TCERG1O14776 1098 aaKnown RBP11.59□□□□□ -0.55
LINC01258-201ENST00000512517 CANXP27824 592 aaKnown RBP11.59□□□□□ -0.55
LINC01258-201ENST00000512517 SIGLEC1Q9BZZ2 1709 aa11.59□□□□□ -0.55
LINC01258-201ENST00000512517 TRPM2O94759 1503 aa11.58□□□□□ -0.55
LINC01258-201ENST00000512517 NBPF8Q3BBV2 869 aa11.58□□□□□ -0.56
LINC01258-201ENST00000512517 LMTK2Q8IWU2 1503 aa11.58□□□□□ -0.56
LINC01258-201ENST00000512517 ARID4BQ4LE39 1312 aaPredicted RBP11.58□□□□□ -0.56
LINC01258-201ENST00000512517 RGS3P49796 1198 aa11.58□□□□□ -0.56
LINC01258-201ENST00000512517 CLTCL1P53675 1640 aa11.58□□□□□ -0.56
LINC01258-201ENST00000512517 CNGB1Q14028 1251 aaPredicted RBP11.57□□□□□ -0.56
LINC01258-201ENST00000512517 ZC3H13Q5T200 1668 aaKnown RBP11.57□□□□□ -0.56
LINC01258-201ENST00000512517 UGGT1Q9NYU2 1555 aa11.57□□□□□ -0.56
LINC01258-201ENST00000512517 KIF1BO60333 1816 aa11.56□□□□□ -0.56
LINC01258-201ENST00000512517 MS4A1P11836 297 aa11.56□□□□□ -0.56
LINC01258-201ENST00000512517 GTF2E1P29083 439 aaPredicted RBP11.56□□□□□ -0.56
LINC01258-201ENST00000512517 NPATQ14207 1427 aa11.56□□□□□ -0.56
LINC01258-201ENST00000512517 REREQ9P2R6 1566 aa11.56□□□□□ -0.56
LINC01258-201ENST00000512517 MAP7D2Q96T17 732 aa11.56□□□□□ -0.56
LINC01258-201ENST00000512517 PTPRTO14522 1441 aa11.56□□□□□ -0.56
LINC01258-201ENST00000512517 SMAP1Q8IYB5 467 aaPredicted RBP11.55□□□□□ -0.56
LINC01258-201ENST00000512517 CHGAP10645 457 aaKnown RBP11.55□□□□□ -0.56
LINC01258-201ENST00000512517 NPM2Q86SE8 214 aaKnown RBP11.54□□□□□ -0.56
LINC01258-201ENST00000512517 CLTCQ00610 1675 aaKnown RBP11.54□□□□□ -0.56
LINC01258-201ENST00000512517 AGLP35573 1532 aa11.54□□□□□ -0.56
LINC01258-201ENST00000512517 BRD2P25440 801 aaKnown RBP11.53□□□□□ -0.56
LINC01258-201ENST00000512517 ESF1Q9H501 851 aaKnown RBP11.53□□□□□ -0.56
LINC01258-201ENST00000512517 STAC3Q96MF2 364 aa11.53□□□□□ -0.56
LINC01258-201ENST00000512517 ZBED9Q6R2W3 1325 aa11.52□□□□□ -0.56
LINC01258-201ENST00000512517 PAXIP1Q6ZW49 1069 aaPredicted RBP11.52□□□□□ -0.57
LINC01258-201ENST00000512517 EIF4G2P78344 907 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC01258-201ENST00000512517 SPATA31E1Q6ZUB1 1445 aa11.51□□□□□ -0.57
LINC01258-201ENST00000512517 HSPA5P11021 654 aaKnown RBP11.51□□□□□ -0.57
LINC01258-201ENST00000512517 BACH2Q9BYV9 841 aa11.51□□□□□ -0.57
LINC01258-201ENST00000512517 RNF123Q5XPI4 1314 aa11.51□□□□□ -0.57
LINC01258-201ENST00000512517 PDE4AP27815 886 aa11.5□□□□□ -0.57
LINC01258-201ENST00000512517 CNTLNQ9NXG0 1405 aa11.5□□□□□ -0.57
LINC01258-201ENST00000512517 MROH2AA6NES4 1674 aa11.5□□□□□ -0.57
LINC01258-201ENST00000512517 PREX1Q8TCU6 1659 aa11.5□□□□□ -0.57
LINC01258-201ENST00000512517 UTP14CQ5TAP6 766 aaKnown RBP11.5□□□□□ -0.57
LINC01258-201ENST00000512517 CHMP4BQ9H444 224 aaKnown RBP11.5□□□□□ -0.57
LINC01258-201ENST00000512517 UHRF1BP1Q6BDS2 1440 aa11.5□□□□□ -0.57
LINC01258-201ENST00000512517 SYNMO15061 1565 aa11.49□□□□□ -0.57
LINC01258-201ENST00000512517 ARHGAP31Q2M1Z3 1444 aa11.48□□□□□ -0.57
LINC01258-201ENST00000512517 PRAG1Q86YV5 1406 aa11.48□□□□□ -0.57
LINC01258-201ENST00000512517 CARD11Q9BXL7 1154 aa11.48□□□□□ -0.57
LINC01258-201ENST00000512517 ROCK2O75116 1388 aaKnown RBP11.48□□□□□ -0.57
LINC01258-201ENST00000512517 SMG6Q86US8 1419 aaKnown RBP11.48□□□□□ -0.57
LINC01258-201ENST00000512517 FBXO31Q5XUX0 539 aaPredicted RBP11.48□□□□□ -0.57
LINC01258-201ENST00000512517 PPP6R1Q9UPN7 881 aa11.48□□□□□ -0.57
LINC01258-201ENST00000512517 RALGAPBQ86X10 1494 aa11.48□□□□□ -0.57
LINC01258-201ENST00000512517 MYO5BQ9ULV0 1848 aa11.47□□□□□ -0.57
LINC01258-201ENST00000512517 TRPM1Q7Z4N2 1603 aa11.47□□□□□ -0.57
LINC01258-201ENST00000512517 NOS1P29475 1434 aa11.47□□□□□ -0.57
LINC01258-201ENST00000512517 USP47Q96K76 1375 aa11.46□□□□□ -0.58
LINC01258-201ENST00000512517 PIK3C2BO00750 1634 aa11.45□□□□□ -0.58
LINC01258-201ENST00000512517 IDI1Q13907 227 aa11.45□□□□□ -0.58
LINC01258-201ENST00000512517 NBPF1Q3BBV0 1214 aa11.45□□□□□ -0.58
LINC01258-201ENST00000512517 MTERF4Q7Z6M4 381 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms