RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 ASXL2Q76L83 1435 aa14.81□□□□□ -0.04
SNF8-211ENST00000512243 WDR7Q9Y4E6 1490 aa14.8□□□□□ -0.04
SNF8-211ENST00000512243 TIAM1Q13009 1591 aa14.8□□□□□ -0.04
SNF8-211ENST00000512243 EMILIN3Q9NT22 766 aa14.78□□□□□ -0.04
SNF8-211ENST00000512243 MAP3K1Q13233 1512 aa14.76□□□□□ -0.05
SNF8-211ENST00000512243 KIF13AQ9H1H9 1805 aa14.76□□□□□ -0.05
SNF8-211ENST00000512243 CDK11AQ9UQ88 783 aaPredicted RBP14.76□□□□□ -0.05
SNF8-211ENST00000512243 DIP2BQ9P265 1576 aa14.76□□□□□ -0.05
SNF8-211ENST00000512243 EHBP1L1Q8N3D4 1523 aa14.76□□□□□ -0.05
SNF8-211ENST00000512243 KIF14Q15058 1648 aa14.75□□□□□ -0.05
SNF8-211ENST00000512243 AXIN2Q9Y2T1 843 aa14.74□□□□□ -0.05
SNF8-211ENST00000512243 TROQ12816 1431 aaPredicted RBP14.74□□□□□ -0.05
SNF8-211ENST00000512243 MAGI3Q5TCQ9 1506 aa14.73□□□□□ -0.05
SNF8-211ENST00000512243 PLEKHD1A6NEE1 506 aa14.73□□□□□ -0.05
SNF8-211ENST00000512243 MMRN1Q13201 1228 aa14.73□□□□□ -0.05
SNF8-211ENST00000512243 POTEEQ6S8J3 1075 aa14.73□□□□□ -0.05
SNF8-211ENST00000512243 ABCC10Q5T3U5 1492 aa14.73□□□□□ -0.05
SNF8-211ENST00000512243 MTUS2Q5JR59 1369 aa14.72□□□□□ -0.05
SNF8-211ENST00000512243 PSDA5PKW4 1024 aaPredicted RBP14.71□□□□□ -0.05
SNF8-211ENST00000512243 MAP3K9P80192 1104 aa14.71□□□□□ -0.05
SNF8-211ENST00000512243 GLI2P10070 1586 aa14.71□□□□□ -0.05
SNF8-211ENST00000512243 SUPT6HQ7KZ85 1726 aaKnown RBP14.71□□□□□ -0.05
SNF8-211ENST00000512243 EVI5O60447 810 aa14.7□□□□□ -0.06
SNF8-211ENST00000512243 ABCA9Q8IUA7 1624 aa14.7□□□□□ -0.06
SNF8-211ENST00000512243 LRRC9Q6ZRR7 1453 aa14.69□□□□□ -0.06
SNF8-211ENST00000512243 PPP4R3BQ5MIZ7 849 aa14.69□□□□□ -0.06
SNF8-211ENST00000512243 ANKRD13DQ6ZTN6 518 aa14.69□□□□□ -0.06
SNF8-211ENST00000512243 TSPOAP1O95153 1857 aa14.69□□□□□ -0.06
SNF8-211ENST00000512243 TTC37Q6PGP7 1564 aa14.68□□□□□ -0.06
SNF8-211ENST00000512243 MAP3K4Q9Y6R4 1608 aa14.68□□□□□ -0.06
SNF8-211ENST00000512243 MYO5CQ9NQX4 1742 aa14.68□□□□□ -0.06
SNF8-211ENST00000512243 LSM11P83369 360 aaKnown RBP eCLIP14.67□□□□□ -0.06
SNF8-211ENST00000512243 ZNF454Q8N9F8 522 aa14.67□□□□□ -0.06
SNF8-211ENST00000512243 KCNH8Q96L42 1107 aa14.67□□□□□ -0.06
SNF8-211ENST00000512243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.66□□□□□ -0.06
SNF8-211ENST00000512243 PBX2P40425 430 aa14.66□□□□□ -0.06
SNF8-211ENST00000512243 CAMK2BQ13554 666 aa14.66□□□□□ -0.06
SNF8-211ENST00000512243 FAM69CQ0P6D2 419 aa14.65□□□□□ -0.06
SNF8-211ENST00000512243 DPYSL4O14531 572 aa14.64□□□□□ -0.07
SNF8-211ENST00000512243 ITSN2Q9NZM3 1697 aa14.64□□□□□ -0.07
SNF8-211ENST00000512243 CDC42BPAQ5VT25 1732 aa14.63□□□□□ -0.07
SNF8-211ENST00000512243 PREX2Q70Z35 1606 aa14.63□□□□□ -0.07
SNF8-211ENST00000512243 PPRC1Q5VV67 1664 aaKnown RBP14.62□□□□□ -0.07
SNF8-211ENST00000512243 PSEN2P49810 448 aa14.62□□□□□ -0.07
SNF8-211ENST00000512243 ANO8Q9HCE9 1232 aaPredicted RBP14.62□□□□□ -0.07
SNF8-211ENST00000512243 TSHZ2Q9NRE2 1034 aa14.62□□□□□ -0.07
SNF8-211ENST00000512243 CFAP74Q9C0B2 1584 aa14.61□□□□□ -0.07
SNF8-211ENST00000512243 CD109Q6YHK3 1445 aa14.61□□□□□ -0.07
SNF8-211ENST00000512243 ARHGAP33O14559 1287 aa14.61□□□□□ -0.07
SNF8-211ENST00000512243 KANK4Q5T7N3 995 aaPredicted RBP14.61□□□□□ -0.07
SNF8-211ENST00000512243 NCOA2Q15596 1464 aa14.61□□□□□ -0.07
SNF8-211ENST00000512243 FOSBP53539 338 aa14.6□□□□□ -0.07
SNF8-211ENST00000512243 CDC42BPBQ9Y5S2 1711 aa14.6□□□□□ -0.07
SNF8-211ENST00000512243 TEX14Q8IWB6 1497 aa14.58□□□□□ -0.08
SNF8-211ENST00000512243 ARAP3Q8WWN8 1544 aa14.58□□□□□ -0.08
SNF8-211ENST00000512243 KCNK17Q96T54 332 aa14.58□□□□□ -0.08
SNF8-211ENST00000512243 WDR70Q9NW82 654 aa14.58□□□□□ -0.08
SNF8-211ENST00000512243 CCNB3Q8WWL7 1395 aa14.58□□□□□ -0.08
SNF8-211ENST00000512243 DMRTA1Q5VZB9 504 aa14.57□□□□□ -0.08
SNF8-211ENST00000512243 ARHGAP5Q13017 1502 aa14.56□□□□□ -0.08
SNF8-211ENST00000512243 PLCH2O75038 1416 aa14.55□□□□□ -0.08
SNF8-211ENST00000512243 E2F4Q16254 413 aa14.54□□□□□ -0.08
SNF8-211ENST00000512243 MYT1LQ9UL68 1186 aa14.54□□□□□ -0.08
SNF8-211ENST00000512243 GPATCH8Q9UKJ3 1502 aaKnown RBP14.54□□□□□ -0.08
SNF8-211ENST00000512243 FANCAO15360 1455 aa14.53□□□□□ -0.08
SNF8-211ENST00000512243 NEO1Q92859 1461 aa14.52□□□□□ -0.08
SNF8-211ENST00000512243 MYOM3Q5VTT5 1437 aa14.52□□□□□ -0.08
SNF8-211ENST00000512243 PPARGC1BQ86YN6 1023 aaKnown RBP14.52□□□□□ -0.09
SNF8-211ENST00000512243 BCL2L12Q9HB09 334 aa14.52□□□□□ -0.09
SNF8-211ENST00000512243 ADGRD1Q6QNK2 874 aa14.51□□□□□ -0.09
SNF8-211ENST00000512243 ZDHHC16Q969W1 377 aa14.51□□□□□ -0.09
SNF8-211ENST00000512243 RNF166Q96A37 237 aaPredicted RBP14.51□□□□□ -0.09
SNF8-211ENST00000512243 ADAM33Q9BZ11 813 aa14.51□□□□□ -0.09
SNF8-211ENST00000512243 PHLDB1Q86UU1 1377 aa14.5□□□□□ -0.09
SNF8-211ENST00000512243 PCDHGA10Q9Y5H3 936 aa14.5□□□□□ -0.09
SNF8-211ENST00000512243 SAMD9LQ8IVG5 1584 aa14.5□□□□□ -0.09
SNF8-211ENST00000512243 PTPN23Q9H3S7 1636 aa14.48□□□□□ -0.09
SNF8-211ENST00000512243 ABCC1P33527 1531 aa14.48□□□□□ -0.09
SNF8-211ENST00000512243 EFCAB2Q5VUJ9 269 aa14.48□□□□□ -0.09
SNF8-211ENST00000512243 CFDP1Q9UEE9 299 aaPredicted RBP14.48□□□□□ -0.09
SNF8-211ENST00000512243 MIA2Q96PC5 1412 aa14.48□□□□□ -0.09
SNF8-211ENST00000512243 ADGRL1O94910 1474 aa14.47□□□□□ -0.09
SNF8-211ENST00000512243 CAMSAP2Q08AD1 1489 aa14.47□□□□□ -0.09
SNF8-211ENST00000512243 PTPREP23469 700 aa14.47□□□□□ -0.09
SNF8-211ENST00000512243 PTGER2P43116 358 aa14.47□□□□□ -0.09
SNF8-211ENST00000512243 KDM6BO15054 1643 aa14.47□□□□□ -0.09
SNF8-211ENST00000512243 FGD6Q6ZV73 1430 aa14.47□□□□□ -0.09
SNF8-211ENST00000512243 AKNAQ7Z591 1439 aa14.47□□□□□ -0.09
SNF8-211ENST00000512243 PLEKHH2Q8IVE3 1493 aa14.46□□□□□ -0.09
SNF8-211ENST00000512243 DDX12PQ92771 950 aa14.46□□□□□ -0.09
SNF8-211ENST00000512243 SYCP2Q9BX26 1530 aa14.46□□□□□ -0.1
SNF8-211ENST00000512243 PLCB2Q00722 1185 aa14.45□□□□□ -0.1
SNF8-211ENST00000512243 PDIA6Q15084 440 aa14.45□□□□□ -0.1
SNF8-211ENST00000512243 RICTORQ6R327 1708 aa14.44□□□□□ -0.1
SNF8-211ENST00000512243 PHF14O94880 888 aa14.44□□□□□ -0.1
SNF8-211ENST00000512243 ZNF777Q9ULD5 760 aaPredicted RBP14.44□□□□□ -0.1
SNF8-211ENST00000512243 TK2O00142 265 aa14.43□□□□□ -0.1
SNF8-211ENST00000512243 TYW1BQ6NUM6 668 aa14.43□□□□□ -0.1
SNF8-211ENST00000512243 TCOF1Q13428 1488 aaKnown RBP14.43□□□□□ -0.1
SNF8-211ENST00000512243 DENND4BO75064 1496 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms