RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 KCNV2Q8TDN2 545 aa13.75□□□□□ -0.21
NPHP3-210ENST00000512094 RBM46Q8TBY0 533 aaKnown RBP13.73□□□□□ -0.21
NPHP3-210ENST00000512094 TMEM134Q9H6X4 195 aa13.72□□□□□ -0.21
NPHP3-210ENST00000512094 TLL1O43897 1013 aa13.71□□□□□ -0.21
NPHP3-210ENST00000512094 TSHZ2Q9NRE2 1034 aa13.71□□□□□ -0.21
NPHP3-210ENST00000512094 ADGRG1Q9Y653 693 aa13.71□□□□□ -0.21
NPHP3-210ENST00000512094 RNF223E7ERA6 249 aa13.7□□□□□ -0.22
NPHP3-210ENST00000512094 KMT5BQ4FZB7 885 aa13.69□□□□□ -0.22
NPHP3-210ENST00000512094 NUTM2FA1L443 756 aa13.67□□□□□ -0.22
NPHP3-210ENST00000512094 SLC19A1P41440 591 aa13.67□□□□□ -0.22
NPHP3-210ENST00000512094 RCCD1A6NED2 376 aa13.66□□□□□ -0.22
NPHP3-210ENST00000512094 ACTN4O43707 911 aaKnown RBP13.66□□□□□ -0.22
NPHP3-210ENST00000512094 CFHP08603 1231 aa13.66□□□□□ -0.22
NPHP3-210ENST00000512094 FAM161AQ3B820 660 aa13.66□□□□□ -0.22
NPHP3-210ENST00000512094 ZNF787Q6DD87 383 aa13.65□□□□□ -0.22
NPHP3-210ENST00000512094 EMID1Q96A84 441 aaPredicted RBP13.65□□□□□ -0.22
NPHP3-210ENST00000512094 TRIM67Q6ZTA4 783 aa13.64□□□□□ -0.23
NPHP3-210ENST00000512094 S1PR4O95977 384 aa13.62□□□□□ -0.23
NPHP3-210ENST00000512094 ANKLE1Q8NAG6 615 aa13.62□□□□□ -0.23
NPHP3-210ENST00000512094 PPEF1O14829 653 aaPredicted RBP13.61□□□□□ -0.23
NPHP3-210ENST00000512094 SPRYD7Q5W111 196 aa13.61□□□□□ -0.23
NPHP3-210ENST00000512094 FCHSD2O94868 740 aa13.6□□□□□ -0.23
NPHP3-210ENST00000512094 SLC10A3P09131 477 aa13.59□□□□□ -0.23
NPHP3-210ENST00000512094 ZNF598Q86UK7 904 aaKnown RBP13.59□□□□□ -0.23
NPHP3-210ENST00000512094 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.58□□□□□ -0.24
NPHP3-210ENST00000512094 ADH1BP00325 375 aa13.58□□□□□ -0.24
NPHP3-210ENST00000512094 PKDCCQ504Y2 493 aa13.57□□□□□ -0.24
NPHP3-210ENST00000512094 NR1I2O75469 434 aa13.56□□□□□ -0.24
NPHP3-210ENST00000512094 LIAT1Q6ZQX7 453 aa13.56□□□□□ -0.24
NPHP3-210ENST00000512094 ZNF697Q5TEC3 545 aa13.55□□□□□ -0.24
NPHP3-210ENST00000512094 P3H3Q8IVL6 736 aa13.55□□□□□ -0.24
NPHP3-210ENST00000512094 PRR20EP86478 221 aa13.54□□□□□ -0.24
NPHP3-210ENST00000512094 PRR20CP86479 221 aa13.54□□□□□ -0.24
NPHP3-210ENST00000512094 PRR20DP86480 221 aa13.54□□□□□ -0.24
NPHP3-210ENST00000512094 PRR20BP86481 221 aa13.54□□□□□ -0.24
NPHP3-210ENST00000512094 PRR20AP86496 221 aa13.54□□□□□ -0.24
NPHP3-210ENST00000512094 PXYLP1Q8TE99 480 aa13.53□□□□□ -0.24
NPHP3-210ENST00000512094 SEMA3EO15041 775 aa13.52□□□□□ -0.25
NPHP3-210ENST00000512094 DGAT1O75907 488 aa13.52□□□□□ -0.25
NPHP3-210ENST00000512094 SLC6A16Q9GZN6 736 aa13.52□□□□□ -0.25
NPHP3-210ENST00000512094 OATP04181 439 aa13.51□□□□□ -0.25
NPHP3-210ENST00000512094 MYT1Q01538 1121 aa13.51□□□□□ -0.25
NPHP3-210ENST00000512094 ZNF775Q96BV0 537 aaPredicted RBP13.5□□□□□ -0.25
NPHP3-210ENST00000512094 TNFRSF10AO00220 468 aa13.49□□□□□ -0.25
NPHP3-210ENST00000512094 FAM187AA6NFU0 413 aa13.48□□□□□ -0.25
NPHP3-210ENST00000512094 PUS10Q3MIT2 529 aaKnown RBP13.48□□□□□ -0.25
NPHP3-210ENST00000512094 GDF9O60383 454 aa13.47□□□□□ -0.25
NPHP3-210ENST00000512094 PLA2G2CQ5R387 149 aa13.47□□□□□ -0.25
NPHP3-210ENST00000512094 SCUBE3Q8IX30 993 aa13.47□□□□□ -0.25
NPHP3-210ENST00000512094 HIC1Q14526 733 aa13.46□□□□□ -0.25
NPHP3-210ENST00000512094 RSPH4AQ5TD94 716 aa13.46□□□□□ -0.25
NPHP3-210ENST00000512094 METTL3Q86U44 580 aaKnown RBP13.46□□□□□ -0.25
NPHP3-210ENST00000512094 SPSB2Q99619 263 aa13.43□□□□□ -0.26
NPHP3-210ENST00000512094 RBM26Q5T8P6 1007 aaKnown RBP13.4□□□□□ -0.26
NPHP3-210ENST00000512094 RDH13Q8NBN7 331 aa13.4□□□□□ -0.26
NPHP3-210ENST00000512094 POTECB2RU33 542 aa13.39□□□□□ -0.27
NPHP3-210ENST00000512094 FECHP22830 423 aa13.37□□□□□ -0.27
NPHP3-210ENST00000512094 FOXC1Q12948 553 aa13.37□□□□□ -0.27
NPHP3-210ENST00000512094 TESPA1A2RU30 521 aaPredicted RBP13.36□□□□□ -0.27
NPHP3-210ENST00000512094 GNPATO15228 680 aa13.36□□□□□ -0.27
NPHP3-210ENST00000512094 PKD2L1Q9P0L9 805 aa13.36□□□□□ -0.27
NPHP3-210ENST00000512094 DAXXQ9UER7 740 aaPredicted RBP13.36□□□□□ -0.27
NPHP3-210ENST00000512094 ST8SIA5O15466 376 aa13.35□□□□□ -0.27
NPHP3-210ENST00000512094 MORN1Q5T089 497 aa13.35□□□□□ -0.27
NPHP3-210ENST00000512094 DDX11L8A8MPP1 907 aa13.34□□□□□ -0.27
NPHP3-210ENST00000512094 FUT2Q10981 343 aa13.34□□□□□ -0.27
NPHP3-210ENST00000512094 SMYD5Q6GMV2 418 aa13.34□□□□□ -0.27
NPHP3-210ENST00000512094 LMOD2Q6P5Q4 547 aa13.34□□□□□ -0.27
NPHP3-210ENST00000512094 NLRP7Q8WX94 980 aa13.33□□□□□ -0.28
NPHP3-210ENST00000512094 AAASQ9NRG9 546 aa13.33□□□□□ -0.28
NPHP3-210ENST00000512094 FCF1Q9Y324 198 aaKnown RBP13.33□□□□□ -0.28
NPHP3-210ENST00000512094 GPR37O15354 613 aa13.32□□□□□ -0.28
NPHP3-210ENST00000512094 RPIAP49247 311 aa13.32□□□□□ -0.28
NPHP3-210ENST00000512094 ATP6V1AP38606 617 aa13.31□□□□□ -0.28
NPHP3-210ENST00000512094 THAP11Q96EK4 314 aa13.31□□□□□ -0.28
NPHP3-210ENST00000512094 FMNL1O95466 1100 aaPredicted RBP13.3□□□□□ -0.28
NPHP3-210ENST00000512094 SLC27A5Q9Y2P5 690 aa13.29□□□□□ -0.28
NPHP3-210ENST00000512094 GCGRP47871 477 aa13.27□□□□□ -0.29
NPHP3-210ENST00000512094 SULF1Q8IWU6 871 aa13.27□□□□□ -0.29
NPHP3-210ENST00000512094 FAM160A2Q8N612 972 aaPredicted RBP13.27□□□□□ -0.29
NPHP3-210ENST00000512094 PRDM9Q9NQV7 894 aa13.27□□□□□ -0.29
NPHP3-210ENST00000512094 CD2BP2O95400 341 aaKnown RBP13.26□□□□□ -0.29
NPHP3-210ENST00000512094 TOR4AQ9NXH8 423 aa13.25□□□□□ -0.29
NPHP3-210ENST00000512094 CYP4X1Q8N118 509 aa13.24□□□□□ -0.29
NPHP3-210ENST00000512094 CRIPAKQ8N1N5 446 aa13.23□□□□□ -0.29
NPHP3-210ENST00000512094 PHOX2BQ99453 314 aa13.23□□□□□ -0.29
NPHP3-210ENST00000512094 SALL2Q9Y467 1007 aaPredicted RBP13.23□□□□□ -0.29
NPHP3-210ENST00000512094 BRICD5Q6PL45 260 aa13.22□□□□□ -0.29
NPHP3-210ENST00000512094 AVPP01185 164 aa13.2□□□□□ -0.3
NPHP3-210ENST00000512094 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
NPHP3-210ENST00000512094 ZBTB24O43167 697 aaPredicted RBP13.19□□□□□ -0.3
NPHP3-210ENST00000512094 MSS51Q4VC12 460 aa13.19□□□□□ -0.3
NPHP3-210ENST00000512094 DACH1Q9UI36 760 aa13.19□□□□□ -0.3
NPHP3-210ENST00000512094 AXIN1O15169 862 aa13.18□□□□□ -0.3
NPHP3-210ENST00000512094 TREML4Q6UXN2 200 aa13.18□□□□□ -0.3
NPHP3-210ENST00000512094 GPIHBP1Q8IV16 184 aa13.18□□□□□ -0.3
NPHP3-210ENST00000512094 GRIPAP1Q4V328 841 aa13.17□□□□□ -0.3
NPHP3-210ENST00000512094 CTC1Q2NKJ3 1217 aa13.16□□□□□ -0.3
NPHP3-210ENST00000512094 TTC24A2A3L6 582 aaPredicted RBP13.15□□□□□ -0.3
NPHP3-210ENST00000512094 GMPR2Q9P2T1 348 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms