RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 TRDNQ13061 729 aa17.6■□□□□ 0.41
TRIO-218ENST00000512070 TSHZ2Q9NRE2 1034 aa17.6■□□□□ 0.41
TRIO-218ENST00000512070 KAT6BQ8WYB5 2073 aa17.59■□□□□ 0.41
TRIO-218ENST00000512070 LETM1O95202 739 aaPredicted RBP17.59■□□□□ 0.41
TRIO-218ENST00000512070 GTF2E1P29083 439 aaPredicted RBP17.59■□□□□ 0.41
TRIO-218ENST00000512070 CPLX1O14810 134 aa17.59■□□□□ 0.41
TRIO-218ENST00000512070 CHMP5Q9NZZ3 219 aa17.59■□□□□ 0.41
TRIO-218ENST00000512070 KIF7Q2M1P5 1343 aa17.58■□□□□ 0.41
TRIO-218ENST00000512070 CCDC66A2RUB6 948 aa17.58■□□□□ 0.41
TRIO-218ENST00000512070 SASS6Q6UVJ0 657 aa17.57■□□□□ 0.4
TRIO-218ENST00000512070 HSP90AB4PQ58FF6 505 aa17.57■□□□□ 0.4
TRIO-218ENST00000512070 PDE4AP27815 886 aa17.57■□□□□ 0.4
TRIO-218ENST00000512070 FAM43AQ8N2R8 423 aa17.57■□□□□ 0.4
TRIO-218ENST00000512070 SAFBQ15424 915 aaKnown RBP eCLIP17.57■□□□□ 0.4
TRIO-218ENST00000512070 MCTP1Q6DN14 999 aa17.56■□□□□ 0.4
TRIO-218ENST00000512070 GGT6Q6P531 493 aa17.56■□□□□ 0.4
TRIO-218ENST00000512070 ANKRD45Q5TZF3 282 aa17.56■□□□□ 0.4
TRIO-218ENST00000512070 PCMTD1Q96MG8 357 aaPredicted RBP17.56■□□□□ 0.4
TRIO-218ENST00000512070 EVC2Q86UK5 1308 aa17.55■□□□□ 0.4
TRIO-218ENST00000512070 RILPL2Q969X0 211 aa17.55■□□□□ 0.4
TRIO-218ENST00000512070 TRIM34Q9BYJ4 488 aa17.55■□□□□ 0.4
TRIO-218ENST00000512070 NGDNQ8NEJ9 315 aaKnown RBP17.55■□□□□ 0.4
TRIO-218ENST00000512070 C1orf141Q5JVX7 400 aa17.55■□□□□ 0.4
TRIO-218ENST00000512070 INTS3Q68E01 1043 aaKnown RBP17.55■□□□□ 0.4
TRIO-218ENST00000512070 CUX1P39880 1505 aa17.55■□□□□ 0.4
TRIO-218ENST00000512070 DDX58O95786 925 aaKnown RBP17.54■□□□□ 0.4
TRIO-218ENST00000512070 RRP1P56182 461 aaKnown RBP17.54■□□□□ 0.4
TRIO-218ENST00000512070 ERICH2A1L162 156 aa17.54■□□□□ 0.4
TRIO-218ENST00000512070 MNS1Q8NEH6 495 aa17.54■□□□□ 0.4
TRIO-218ENST00000512070 STAC3Q96MF2 364 aa17.54■□□□□ 0.4
TRIO-218ENST00000512070 CCDC73Q6ZRK6 1079 aa17.54■□□□□ 0.4
TRIO-218ENST00000512070 HMGN5P82970 282 aaKnown RBP17.54■□□□□ 0.4
TRIO-218ENST00000512070 CCDC39Q9UFE4 941 aa17.53■□□□□ 0.4
TRIO-218ENST00000512070 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.53■□□□□ 0.4
TRIO-218ENST00000512070 ERC2O15083 957 aa17.53■□□□□ 0.4
TRIO-218ENST00000512070 API5Q9BZZ5 524 aaKnown RBP17.53■□□□□ 0.4
TRIO-218ENST00000512070 ZRSR2Q15696 482 aaKnown RBP17.53■□□□□ 0.4
TRIO-218ENST00000512070 BRMS1Q9HCU9 246 aa17.53■□□□□ 0.4
TRIO-218ENST00000512070 ODF2Q5BJF6 829 aa17.52■□□□□ 0.4
TRIO-218ENST00000512070 ZNF592Q92610 1267 aa17.52■□□□□ 0.4
TRIO-218ENST00000512070 NINLQ9Y2I6 1382 aa17.52■□□□□ 0.4
TRIO-218ENST00000512070 NOL8Q76FK4 1167 aaKnown RBP17.52■□□□□ 0.39
TRIO-218ENST00000512070 XBP1P17861 261 aa17.52■□□□□ 0.39
TRIO-218ENST00000512070 TXLNBQ8N3L3 684 aa17.52■□□□□ 0.39
TRIO-218ENST00000512070 BICD2Q8TD16 824 aa17.52■□□□□ 0.39
TRIO-218ENST00000512070 C9orf78Q9NZ63 289 aaPredicted RBP17.51■□□□□ 0.39
TRIO-218ENST00000512070 CCDC43Q96MW1 224 aaKnown RBP17.51■□□□□ 0.39
TRIO-218ENST00000512070 PDE4CQ08493 712 aa17.51■□□□□ 0.39
TRIO-218ENST00000512070 CLUAP1Q96AJ1 413 aa17.51■□□□□ 0.39
TRIO-218ENST00000512070 PDCP20941 246 aa17.51■□□□□ 0.39
TRIO-218ENST00000512070 MCM2P49736 904 aa17.51■□□□□ 0.39
TRIO-218ENST00000512070 OLFM4Q6UX06 510 aa17.5■□□□□ 0.39
TRIO-218ENST00000512070 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.5■□□□□ 0.39
TRIO-218ENST00000512070 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
TRIO-218ENST00000512070 CT47A1Q5JQC4 288 aaPredicted RBP17.5■□□□□ 0.39
TRIO-218ENST00000512070 VSIG10Q8N0Z9 540 aa17.49■□□□□ 0.39
TRIO-218ENST00000512070 MBD3O95983 291 aa17.49■□□□□ 0.39
TRIO-218ENST00000512070 PIP4K2AP48426 406 aaPredicted RBP17.49■□□□□ 0.39
TRIO-218ENST00000512070 COG3Q96JB2 828 aa17.49■□□□□ 0.39
TRIO-218ENST00000512070 CTDP1Q9Y5B0 961 aaPredicted RBP17.49■□□□□ 0.39
TRIO-218ENST00000512070 CAGE1Q8TC20 777 aa17.48■□□□□ 0.39
TRIO-218ENST00000512070 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
TRIO-218ENST00000512070 IFIT2P09913 472 aaKnown RBP17.48■□□□□ 0.39
TRIO-218ENST00000512070 EPS15P42566 896 aa17.48■□□□□ 0.39
TRIO-218ENST00000512070 TEFQ10587 303 aa17.48■□□□□ 0.39
TRIO-218ENST00000512070 MRE11P49959 708 aa17.48■□□□□ 0.39
TRIO-218ENST00000512070 SMC3Q9UQE7 1217 aa17.48■□□□□ 0.39
TRIO-218ENST00000512070 PRDM2Q13029 1718 aa17.48■□□□□ 0.39
TRIO-218ENST00000512070 PSMA5P28066 241 aa17.47■□□□□ 0.39
TRIO-218ENST00000512070 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
TRIO-218ENST00000512070 TTC5Q8N0Z6 440 aa17.47■□□□□ 0.39
TRIO-218ENST00000512070 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
TRIO-218ENST00000512070 MLECQ14165 292 aa17.47■□□□□ 0.39
TRIO-218ENST00000512070 CAVIN1Q6NZI2 390 aaKnown RBP17.47■□□□□ 0.39
TRIO-218ENST00000512070 LUC7LQ9NQ29 371 aaKnown RBP17.47■□□□□ 0.39
TRIO-218ENST00000512070 IFT57Q9NWB7 429 aa17.47■□□□□ 0.39
TRIO-218ENST00000512070 WASHC2CQ9Y4E1 1318 aa17.46■□□□□ 0.39
TRIO-218ENST00000512070 PDIA4P13667 645 aaKnown RBP17.46■□□□□ 0.39
TRIO-218ENST00000512070 VGFO15240 615 aaPredicted RBP17.46■□□□□ 0.38
TRIO-218ENST00000512070 USP47Q96K76 1375 aa17.45■□□□□ 0.38
TRIO-218ENST00000512070 H0YHG0 523 aa17.45■□□□□ 0.38
TRIO-218ENST00000512070 L3MBTL2Q969R5 705 aa17.45■□□□□ 0.38
TRIO-218ENST00000512070 WASHC2AQ641Q2 1341 aa17.45■□□□□ 0.38
TRIO-218ENST00000512070 SMARCE1Q969G3 411 aa17.45■□□□□ 0.38
TRIO-218ENST00000512070 ANO2Q9NQ90 1003 aa17.45■□□□□ 0.38
TRIO-218ENST00000512070 FAM13BQ9NYF5 915 aa17.45■□□□□ 0.38
TRIO-218ENST00000512070 SCAPERQ9BY12 1400 aa17.44■□□□□ 0.38
TRIO-218ENST00000512070 NASPP49321 788 aaPredicted RBP17.44■□□□□ 0.38
TRIO-218ENST00000512070 GOLGA6L7A0A1B0GV03 622 aa17.44■□□□□ 0.38
TRIO-218ENST00000512070 VPS37DQ86XT2 251 aa17.44■□□□□ 0.38
TRIO-218ENST00000512070 CCDC146Q8IYE0 955 aa17.43■□□□□ 0.38
TRIO-218ENST00000512070 HIP1O00291 1037 aa17.43■□□□□ 0.38
TRIO-218ENST00000512070 RALYLQ86SE5 291 aaKnown RBP17.43■□□□□ 0.38
TRIO-218ENST00000512070 DZIP1LQ8IYY4 767 aaKnown RBP17.43■□□□□ 0.38
TRIO-218ENST00000512070 G3BP1Q13283 466 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRIO-218ENST00000512070 OFD1O75665 1012 aa17.42■□□□□ 0.38
TRIO-218ENST00000512070 ERLIN2O94905 339 aa17.42■□□□□ 0.38
TRIO-218ENST00000512070 DHX16O60231 1041 aaKnown RBP17.42■□□□□ 0.38
TRIO-218ENST00000512070 PATL2C9JE40 543 aaKnown RBP17.42■□□□□ 0.38
TRIO-218ENST00000512070 R3HCC1Q9Y3T6 440 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms