RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 KDM4CQ9H3R0 1056 aa6.83□□□□□ -1.32
TRAPPC11-208ENST00000511955 ARHGAP5Q13017 1502 aa6.83□□□□□ -1.32
TRAPPC11-208ENST00000511955 FANCAO15360 1455 aa6.83□□□□□ -1.32
TRAPPC11-208ENST00000511955 PPRC1Q5VV67 1664 aaKnown RBP6.82□□□□□ -1.32
TRAPPC11-208ENST00000511955 CFAP43Q8NDM7 1665 aa6.82□□□□□ -1.32
TRAPPC11-208ENST00000511955 EHBP1L1Q8N3D4 1523 aa6.82□□□□□ -1.32
TRAPPC11-208ENST00000511955 NCOA2Q15596 1464 aa6.82□□□□□ -1.32
TRAPPC11-208ENST00000511955 TEX14Q8IWB6 1497 aa6.82□□□□□ -1.32
TRAPPC11-208ENST00000511955 COL17A1Q9UMD9 1497 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC11-208ENST00000511955 OS9Q13438 667 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC11-208ENST00000511955 EFCAB2Q5VUJ9 269 aa6.82□□□□□ -1.32
TRAPPC11-208ENST00000511955 SPATA32Q96LK8 384 aa6.82□□□□□ -1.32
TRAPPC11-208ENST00000511955 KDM6BO15054 1643 aa6.81□□□□□ -1.32
TRAPPC11-208ENST00000511955 MARCH6O60337 910 aa6.81□□□□□ -1.32
TRAPPC11-208ENST00000511955 ABCB7O75027 752 aa6.81□□□□□ -1.32
TRAPPC11-208ENST00000511955 PLCH2O75038 1416 aa6.81□□□□□ -1.32
TRAPPC11-208ENST00000511955 MCCP23508 829 aa6.81□□□□□ -1.32
TRAPPC11-208ENST00000511955 HNRNPMP52272 730 aaKnown RBP eCLIP6.81□□□□□ -1.32
TRAPPC11-208ENST00000511955 FLIIQ13045 1269 aa6.81□□□□□ -1.32
TRAPPC11-208ENST00000511955 CCDC97Q96F63 343 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC11-208ENST00000511955 ZMYND10O75800 440 aa6.8□□□□□ -1.32
TRAPPC11-208ENST00000511955 CANXP27824 592 aaKnown RBP6.8□□□□□ -1.32
TRAPPC11-208ENST00000511955 GRIPAP1Q4V328 841 aa6.8□□□□□ -1.32
TRAPPC11-208ENST00000511955 AFAP1Q8N556 730 aa6.8□□□□□ -1.32
TRAPPC11-208ENST00000511955 NAP1L2Q9ULW6 460 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC11-208ENST00000511955 AMOTL2Q9Y2J4 779 aa6.8□□□□□ -1.32
TRAPPC11-208ENST00000511955 LAS1LQ9Y4W2 734 aaKnown RBP6.8□□□□□ -1.32
TRAPPC11-208ENST00000511955 GPATCH8Q9UKJ3 1502 aaKnown RBP6.8□□□□□ -1.32
TRAPPC11-208ENST00000511955 ADGRL1O94910 1474 aa6.8□□□□□ -1.32
TRAPPC11-208ENST00000511955 MYO5CQ9NQX4 1742 aa6.8□□□□□ -1.32
TRAPPC11-208ENST00000511955 AKNAQ7Z591 1439 aa6.8□□□□□ -1.32
TRAPPC11-208ENST00000511955 SCAPERQ9BY12 1400 aa6.8□□□□□ -1.32
TRAPPC11-208ENST00000511955 ITGAEP38570 1179 aa6.79□□□□□ -1.32
TRAPPC11-208ENST00000511955 SUPT6HQ7KZ85 1726 aaKnown RBP6.79□□□□□ -1.32
TRAPPC11-208ENST00000511955 SECISBP2LQ93073 1101 aaKnown RBP6.79□□□□□ -1.32
TRAPPC11-208ENST00000511955 PHLDB1Q86UU1 1377 aa6.79□□□□□ -1.32
TRAPPC11-208ENST00000511955 FAM9BQ8IZU0 186 aa6.78□□□□□ -1.32
TRAPPC11-208ENST00000511955 CDC42BPAQ5VT25 1732 aa6.78□□□□□ -1.32
TRAPPC11-208ENST00000511955 CHRM1P11229 460 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC11-208ENST00000511955 MYH16Q9H6N6 1097 aa6.78□□□□□ -1.32
TRAPPC11-208ENST00000511955 CDC42BPBQ9Y5S2 1711 aa6.78□□□□□ -1.32
TRAPPC11-208ENST00000511955 A6NJR5 290 aa6.77□□□□□ -1.33
TRAPPC11-208ENST00000511955 NEUROD1Q13562 356 aa6.77□□□□□ -1.33
TRAPPC11-208ENST00000511955 TMTC2Q8N394 836 aa6.77□□□□□ -1.33
TRAPPC11-208ENST00000511955 PREX2Q70Z35 1606 aa6.77□□□□□ -1.33
TRAPPC11-208ENST00000511955 NEO1Q92859 1461 aa6.77□□□□□ -1.33
TRAPPC11-208ENST00000511955 ANKRD62A6NC57 917 aa6.77□□□□□ -1.33
TRAPPC11-208ENST00000511955 FOXD4L6Q3SYB3 417 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC11-208ENST00000511955 FOXD4L3Q6VB84 417 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC11-208ENST00000511955 DENND4BO75064 1496 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC11-208ENST00000511955 MAP3K1Q13233 1512 aa6.76□□□□□ -1.33
TRAPPC11-208ENST00000511955 SYCP2Q9BX26 1530 aa6.76□□□□□ -1.33
TRAPPC11-208ENST00000511955 DEKP35659 375 aaKnown RBP6.76□□□□□ -1.33
TRAPPC11-208ENST00000511955 GLIPR1L2Q4G1C9 344 aa6.76□□□□□ -1.33
TRAPPC11-208ENST00000511955 SGSM3Q96HU1 749 aa6.76□□□□□ -1.33
TRAPPC11-208ENST00000511955 IGSF5Q9NSI5 407 aa6.76□□□□□ -1.33
TRAPPC11-208ENST00000511955 ARHGEF12Q9NZN5 1544 aa6.76□□□□□ -1.33
TRAPPC11-208ENST00000511955 TRAPPC8Q9Y2L5 1435 aa6.76□□□□□ -1.33
TRAPPC11-208ENST00000511955 DSG3P32926 999 aa6.76□□□□□ -1.33
TRAPPC11-208ENST00000511955 RBM27Q9P2N5 1060 aaKnown RBP6.76□□□□□ -1.33
TRAPPC11-208ENST00000511955 CHIC2Q9UKJ5 165 aa6.76□□□□□ -1.33
TRAPPC11-208ENST00000511955 PPME1Q9Y570 386 aa6.76□□□□□ -1.33
TRAPPC11-208ENST00000511955 SAMD9LQ8IVG5 1584 aa6.75□□□□□ -1.33
TRAPPC11-208ENST00000511955 MYOM3Q5VTT5 1437 aa6.75□□□□□ -1.33
TRAPPC11-208ENST00000511955 PTMAP06454 111 aaKnown RBP6.75□□□□□ -1.33
TRAPPC11-208ENST00000511955 MLECQ14165 292 aa6.75□□□□□ -1.33
TRAPPC11-208ENST00000511955 SPTY2D1Q68D10 685 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC11-208ENST00000511955 SERPINA10Q9UK55 444 aa6.75□□□□□ -1.33
TRAPPC11-208ENST00000511955 CAMSAP2Q08AD1 1489 aa6.75□□□□□ -1.33
TRAPPC11-208ENST00000511955 TPD52L2O43399 206 aaKnown RBP6.75□□□□□ -1.33
TRAPPC11-208ENST00000511955 ONECUT3O60422 494 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC11-208ENST00000511955 FAM117AQ9C073 453 aa6.75□□□□□ -1.33
TRAPPC11-208ENST00000511955 KCNG1Q9UIX4 513 aa6.75□□□□□ -1.33
TRAPPC11-208ENST00000511955 CFAP74Q9C0B2 1584 aa6.74□□□□□ -1.33
TRAPPC11-208ENST00000511955 POGZQ7Z3K3 1410 aa6.74□□□□□ -1.33
TRAPPC11-208ENST00000511955 ITSN2Q9NZM3 1697 aa6.74□□□□□ -1.33
TRAPPC11-208ENST00000511955 ARAP3Q8WWN8 1544 aa6.74□□□□□ -1.33
TRAPPC11-208ENST00000511955 CIZ1Q9ULV3 898 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC11-208ENST00000511955 YEATS2Q9ULM3 1422 aa6.74□□□□□ -1.33
TRAPPC11-208ENST00000511955 NEFMP07197 916 aa6.73□□□□□ -1.33
TRAPPC11-208ENST00000511955 GORABQ5T7V8 394 aa6.73□□□□□ -1.33
TRAPPC11-208ENST00000511955 SPAG9O60271 1321 aaKnown RBP6.73□□□□□ -1.33
TRAPPC11-208ENST00000511955 FGD6Q6ZV73 1430 aa6.73□□□□□ -1.33
TRAPPC11-208ENST00000511955 ABCC1P33527 1531 aa6.73□□□□□ -1.33
TRAPPC11-208ENST00000511955 FRMPD1Q5SYB0 1578 aa6.73□□□□□ -1.33
TRAPPC11-208ENST00000511955 CACNB1Q02641 598 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC11-208ENST00000511955 SALL2Q9Y467 1007 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC11-208ENST00000511955 ZNF518AQ6AHZ1 1483 aa6.73□□□□□ -1.33
TRAPPC11-208ENST00000511955 SEMA3EO15041 775 aa6.72□□□□□ -1.33
TRAPPC11-208ENST00000511955 TSPY4P0CV99 314 aa6.72□□□□□ -1.33
TRAPPC11-208ENST00000511955 TSPY10P0CW01 314 aa6.72□□□□□ -1.33
TRAPPC11-208ENST00000511955 SIRT1Q96EB6 747 aa6.72□□□□□ -1.33
TRAPPC11-208ENST00000511955 PCGF6Q9BYE7 350 aa6.72□□□□□ -1.33
TRAPPC11-208ENST00000511955 ARIH1Q9Y4X5 557 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC11-208ENST00000511955 MICAL1Q8TDZ2 1067 aa6.72□□□□□ -1.33
TRAPPC11-208ENST00000511955 HIRIP3Q9BW71 556 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC11-208ENST00000511955 RICTORQ6R327 1708 aa6.72□□□□□ -1.33
TRAPPC11-208ENST00000511955 PPP1R1BQ9UD71 204 aaPredicted RBP6.71□□□□□ -1.33
TRAPPC11-208ENST00000511955 PTPN23Q9H3S7 1636 aa6.71□□□□□ -1.34
TRAPPC11-208ENST00000511955 FOSBP53539 338 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms