RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 RAB3GAP2Q9H2M9 1393 aa15.38■□□□□ 0.05
HOXA4-203ENST00000511914 ABCC5O15440 1437 aa15.38■□□□□ 0.05
HOXA4-203ENST00000511914 LRRC7Q96NW7 1537 aa15.38■□□□□ 0.05
HOXA4-203ENST00000511914 XIRP1Q702N8 1843 aaKnown RBP15.36■□□□□ 0.05
HOXA4-203ENST00000511914 NAIPQ13075 1403 aa15.35■□□□□ 0.05
HOXA4-203ENST00000511914 DUOX2Q9NRD8 1548 aa15.35■□□□□ 0.05
HOXA4-203ENST00000511914 PIK3C2BO00750 1634 aa15.34■□□□□ 0.05
HOXA4-203ENST00000511914 ADGRL2O95490 1459 aa15.33■□□□□ 0.05
HOXA4-203ENST00000511914 SCAF11Q99590 1463 aaKnown RBP15.33■□□□□ 0.05
HOXA4-203ENST00000511914 DHX57Q6P158 1386 aaKnown RBP15.33■□□□□ 0.04
HOXA4-203ENST00000511914 PRDM15P57071 1507 aaPredicted RBP15.33■□□□□ 0.04
HOXA4-203ENST00000511914 LTKP29376 864 aa15.31■□□□□ 0.04
HOXA4-203ENST00000511914 TXNDC2Q86VQ3 553 aa15.3■□□□□ 0.04
HOXA4-203ENST00000511914 ANKRD30AQ9BXX3 1397 aa15.3■□□□□ 0.04
HOXA4-203ENST00000511914 KIF15Q9NS87 1388 aa15.3■□□□□ 0.04
HOXA4-203ENST00000511914 RRP7BPQ9NSQ0 103 aa15.3■□□□□ 0.04
HOXA4-203ENST00000511914 SLIT1O75093 1534 aa15.29■□□□□ 0.04
HOXA4-203ENST00000511914 ARHGAP23Q9P227 1491 aa15.29■□□□□ 0.04
HOXA4-203ENST00000511914 RBM42Q9BTD8 480 aaKnown RBP15.29■□□□□ 0.04
HOXA4-203ENST00000511914 CHIC2Q9UKJ5 165 aa15.28■□□□□ 0.04
HOXA4-203ENST00000511914 GCC2Q8IWJ2 1684 aa15.28■□□□□ 0.04
HOXA4-203ENST00000511914 ERBINQ96RT1 1412 aa15.27■□□□□ 0.04
HOXA4-203ENST00000511914 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
HOXA4-203ENST00000511914 EID1Q9Y6B2 187 aa15.26■□□□□ 0.03
HOXA4-203ENST00000511914 ARHGAP31Q2M1Z3 1444 aa15.26■□□□□ 0.03
HOXA4-203ENST00000511914 POLA2Q14181 598 aa15.24■□□□□ 0.03
HOXA4-203ENST00000511914 EFCAB6Q5THR3 1501 aa15.23■□□□□ 0.03
HOXA4-203ENST00000511914 KDM5AP29375 1690 aaKnown RBP15.23■□□□□ 0.03
HOXA4-203ENST00000511914 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
HOXA4-203ENST00000511914 KANK1Q14678 1352 aa15.23■□□□□ 0.03
HOXA4-203ENST00000511914 TMEM2Q9UHN6 1383 aa15.23■□□□□ 0.03
HOXA4-203ENST00000511914 MYO5BQ9ULV0 1848 aa15.22■□□□□ 0.03
HOXA4-203ENST00000511914 RBM33Q96EV2 1170 aaKnown RBP15.22■□□□□ 0.03
HOXA4-203ENST00000511914 ROBO1Q9Y6N7 1651 aa15.22■□□□□ 0.03
HOXA4-203ENST00000511914 IDI1Q13907 227 aa15.2■□□□□ 0.02
HOXA4-203ENST00000511914 SLC26A8Q96RN1 970 aa15.2■□□□□ 0.02
HOXA4-203ENST00000511914 RGS17Q9UGC6 210 aaPredicted RBP15.19■□□□□ 0.02
HOXA4-203ENST00000511914 TMEM94Q12767 1356 aa15.19■□□□□ 0.02
HOXA4-203ENST00000511914 ANKRD50Q9ULJ7 1429 aa15.18■□□□□ 0.02
HOXA4-203ENST00000511914 TET3O43151 1660 aa15.18■□□□□ 0.02
HOXA4-203ENST00000511914 ADGRB3O60242 1522 aa15.17■□□□□ 0.02
HOXA4-203ENST00000511914 LMTK2Q8IWU2 1503 aa15.17■□□□□ 0.02
HOXA4-203ENST00000511914 BCANQ96GW7 911 aa15.17■□□□□ 0.02
HOXA4-203ENST00000511914 TIMELESSQ9UNS1 1208 aa15.17■□□□□ 0.02
HOXA4-203ENST00000511914 PROSER2Q86WR7 435 aaPredicted RBP15.15■□□□□ 0.02
HOXA4-203ENST00000511914 FAM135BQ49AJ0 1406 aa15.15■□□□□ 0.02
HOXA4-203ENST00000511914 NWD1Q149M9 1564 aa15.15■□□□□ 0.02
HOXA4-203ENST00000511914 PHLPP1O60346 1717 aa15.14■□□□□ 0.01
HOXA4-203ENST00000511914 KCNA6P17658 529 aa15.14■□□□□ 0.01
HOXA4-203ENST00000511914 NOS1P29475 1434 aa15.13■□□□□ 0.01
HOXA4-203ENST00000511914 CHRDL2Q6WN34 429 aa15.13■□□□□ 0.01
HOXA4-203ENST00000511914 TRIM52Q96A61 297 aa15.13■□□□□ 0.01
HOXA4-203ENST00000511914 CHD2O14647 1828 aaKnown RBP15.13■□□□□ 0.01
HOXA4-203ENST00000511914 SETD1AO15047 1707 aaKnown RBP15.12■□□□□ 0.01
HOXA4-203ENST00000511914 MPHOSPH9Q99550 1183 aa15.12■□□□□ 0.01
HOXA4-203ENST00000511914 NKTRP30414 1462 aaKnown RBP15.11■□□□□ 0.01
HOXA4-203ENST00000511914 POTEAQ6S8J7 498 aa15.1■□□□□ 0.01
HOXA4-203ENST00000511914 MSH6P52701 1360 aa15.1■□□□□ 0.01
HOXA4-203ENST00000511914 TMEM131LA2VDJ0 1609 aa15.09■□□□□ 0.01
HOXA4-203ENST00000511914 PPP1R15AO75807 674 aaPredicted RBP15.08■□□□□ 0
HOXA4-203ENST00000511914 SLC52A1Q9NWF4 448 aa15.08■□□□□ 0
HOXA4-203ENST00000511914 E9PCH4 1651 aa15.07■□□□□ 0
HOXA4-203ENST00000511914 ZFYVE9O95405 1425 aa15.07■□□□□ 0
HOXA4-203ENST00000511914 RPRD2Q5VT52 1461 aaKnown RBP15.07■□□□□ 0
HOXA4-203ENST00000511914 CHGAP10645 457 aaKnown RBP15.06■□□□□ 0
HOXA4-203ENST00000511914 SLC4A1APQ9BWU0 796 aaKnown RBP15.06■□□□□ 0
HOXA4-203ENST00000511914 RIMS2Q9UQ26 1411 aa15.06■□□□□ 0
HOXA4-203ENST00000511914 NUTM2DQ5VT03 806 aaPredicted RBP15.05■□□□□ -0
HOXA4-203ENST00000511914 SLAIN2Q9P270 581 aa15.05■□□□□ -0
HOXA4-203ENST00000511914 UNC13BO14795 1591 aa15.05■□□□□ -0
HOXA4-203ENST00000511914 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.04■□□□□ -0
HOXA4-203ENST00000511914 COL16A1Q07092 1604 aaPredicted RBP15.04■□□□□ -0
HOXA4-203ENST00000511914 NUP155O75694 1391 aa15.04■□□□□ -0
HOXA4-203ENST00000511914 PLEKHG1Q9ULL1 1385 aa15.04■□□□□ -0
HOXA4-203ENST00000511914 C14orf37Q86TY3 774 aa15.03■□□□□ -0
HOXA4-203ENST00000511914 ANKRD30BQ9BXX2 1392 aa15.02■□□□□ -0
HOXA4-203ENST00000511914 JCADQ9P266 1359 aa15□□□□□ -0.01
HOXA4-203ENST00000511914 HDGFP51858 240 aaKnown RBP15□□□□□ -0.01
HOXA4-203ENST00000511914 IQGAP3Q86VI3 1631 aa14.99□□□□□ -0.01
HOXA4-203ENST00000511914 SIN3AQ96ST3 1273 aa14.99□□□□□ -0.01
HOXA4-203ENST00000511914 LRP6O75581 1613 aa14.99□□□□□ -0.01
HOXA4-203ENST00000511914 ADAMTS13Q76LX8 1427 aa14.98□□□□□ -0.01
HOXA4-203ENST00000511914 DIP2AQ14689 1571 aa14.98□□□□□ -0.01
HOXA4-203ENST00000511914 NEUROD1Q13562 356 aa14.97□□□□□ -0.01
HOXA4-203ENST00000511914 TBX22Q9Y458 520 aa14.97□□□□□ -0.01
HOXA4-203ENST00000511914 SHPRHQ149N8 1683 aa14.97□□□□□ -0.01
HOXA4-203ENST00000511914 MEX3CQ5U5Q3 659 aaKnown RBP14.96□□□□□ -0.01
HOXA4-203ENST00000511914 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.96□□□□□ -0.01
HOXA4-203ENST00000511914 ATF5Q9Y2D1 282 aaPredicted RBP14.96□□□□□ -0.01
HOXA4-203ENST00000511914 TRPM2O94759 1503 aa14.96□□□□□ -0.02
HOXA4-203ENST00000511914 TONSLQ96HA7 1378 aa14.96□□□□□ -0.02
HOXA4-203ENST00000511914 AHDC1Q5TGY3 1603 aaPredicted RBP14.95□□□□□ -0.02
HOXA4-203ENST00000511914 ATF3P18847 181 aa14.94□□□□□ -0.02
HOXA4-203ENST00000511914 SPHKAPQ2M3C7 1700 aa14.94□□□□□ -0.02
HOXA4-203ENST00000511914 NCOA3Q9Y6Q9 1424 aa14.93□□□□□ -0.02
HOXA4-203ENST00000511914 NRXN3Q9Y4C0 1643 aa14.93□□□□□ -0.02
HOXA4-203ENST00000511914 CADPS2Q86UW7 1296 aa14.93□□□□□ -0.02
HOXA4-203ENST00000511914 PTPRUQ92729 1446 aa14.92□□□□□ -0.02
HOXA4-203ENST00000511914 C19orf44Q9H6X5 657 aa14.92□□□□□ -0.02
HOXA4-203ENST00000511914 AMOTL2Q9Y2J4 779 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms