RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 GPATCH8Q9UKJ3 1502 aaKnown RBP15.07■□□□□ 0
PTPN20-225ENST00000511769 ERVK-7P63135 1459 aa15.06■□□□□ 0
PTPN20-225ENST00000511769 NKTRP30414 1462 aaKnown RBP15.06■□□□□ 0
PTPN20-225ENST00000511769 ABCC3O15438 1527 aa15.05■□□□□ 0
PTPN20-225ENST00000511769 CCDC125Q86Z20 511 aa15.04■□□□□ -0
PTPN20-225ENST00000511769 KDM5AP29375 1690 aaKnown RBP15.04■□□□□ -0
PTPN20-225ENST00000511769 DIP2AQ14689 1571 aa15.03■□□□□ -0
PTPN20-225ENST00000511769 SLC26A8Q96RN1 970 aa15.03■□□□□ -0
PTPN20-225ENST00000511769 CFDP1Q9UEE9 299 aaPredicted RBP15.03■□□□□ -0
PTPN20-225ENST00000511769 NWD1Q149M9 1564 aa15.03■□□□□ -0
PTPN20-225ENST00000511769 RTEL1-TNFRSF6BF6WH68 1400 aa15.01□□□□□ -0.01
PTPN20-225ENST00000511769 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
PTPN20-225ENST00000511769 EHBP1L1Q8N3D4 1523 aa15□□□□□ -0.01
PTPN20-225ENST00000511769 EP400Q96L91 3159 aa14.99□□□□□ -0.01
PTPN20-225ENST00000511769 PCGF6Q9BYE7 350 aa14.98□□□□□ -0.01
PTPN20-225ENST00000511769 NHSL1Q5SYE7 1610 aa14.98□□□□□ -0.01
PTPN20-225ENST00000511769 TMEM2Q9UHN6 1383 aa14.97□□□□□ -0.01
PTPN20-225ENST00000511769 PSDA5PKW4 1024 aaPredicted RBP14.95□□□□□ -0.02
PTPN20-225ENST00000511769 DEFB132Q7Z7B7 95 aa14.95□□□□□ -0.02
PTPN20-225ENST00000511769 C14orf37Q86TY3 774 aa14.95□□□□□ -0.02
PTPN20-225ENST00000511769 TET3O43151 1660 aa14.95□□□□□ -0.02
PTPN20-225ENST00000511769 ZNF644Q9H582 1327 aaPredicted RBP14.94□□□□□ -0.02
PTPN20-225ENST00000511769 SENP3-EIF4A1A0A087X0R7 540 aa14.94□□□□□ -0.02
PTPN20-225ENST00000511769 MAST1Q9Y2H9 1570 aa14.94□□□□□ -0.02
PTPN20-225ENST00000511769 MBD5Q9P267 1494 aa14.94□□□□□ -0.02
PTPN20-225ENST00000511769 CCNB3Q8WWL7 1395 aa14.94□□□□□ -0.02
PTPN20-225ENST00000511769 HRCP23327 699 aa14.93□□□□□ -0.02
PTPN20-225ENST00000511769 TRPC5Q9UL62 973 aaPredicted RBP14.93□□□□□ -0.02
PTPN20-225ENST00000511769 ADAMTS2O95450 1211 aa14.92□□□□□ -0.02
PTPN20-225ENST00000511769 STAG3Q9UJ98 1225 aa14.92□□□□□ -0.02
PTPN20-225ENST00000511769 USP21Q9UK80 565 aa14.92□□□□□ -0.02
PTPN20-225ENST00000511769 BLMP54132 1417 aaPredicted RBP14.92□□□□□ -0.02
PTPN20-225ENST00000511769 SETD5Q9C0A6 1442 aa14.92□□□□□ -0.02
PTPN20-225ENST00000511769 BRINP3Q76B58 766 aa14.92□□□□□ -0.02
PTPN20-225ENST00000511769 CADPS2Q86UW7 1296 aa14.92□□□□□ -0.02
PTPN20-225ENST00000511769 BCANQ96GW7 911 aa14.92□□□□□ -0.02
PTPN20-225ENST00000511769 PIK3C2BO00750 1634 aa14.91□□□□□ -0.02
PTPN20-225ENST00000511769 ATF3P18847 181 aa14.91□□□□□ -0.02
PTPN20-225ENST00000511769 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
PTPN20-225ENST00000511769 CAMSAP2Q08AD1 1489 aa14.9□□□□□ -0.02
PTPN20-225ENST00000511769 CFAP65Q6ZU64 1925 aaKnown RBP14.89□□□□□ -0.03
PTPN20-225ENST00000511769 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.89□□□□□ -0.03
PTPN20-225ENST00000511769 PNPLA6Q8IY17 1366 aa14.88□□□□□ -0.03
PTPN20-225ENST00000511769 SF3B2Q13435 895 aaKnown RBP14.88□□□□□ -0.03
PTPN20-225ENST00000511769 BCL9LQ86UU0 1499 aa14.87□□□□□ -0.03
PTPN20-225ENST00000511769 ATRNO75882 1429 aa14.87□□□□□ -0.03
PTPN20-225ENST00000511769 RRBP1Q9P2E9 1410 aaKnown RBP14.87□□□□□ -0.03
PTPN20-225ENST00000511769 NCOA3Q9Y6Q9 1424 aa14.87□□□□□ -0.03
PTPN20-225ENST00000511769 EFCAB6Q5THR3 1501 aa14.87□□□□□ -0.03
PTPN20-225ENST00000511769 ASXL1Q8IXJ9 1541 aa14.87□□□□□ -0.03
PTPN20-225ENST00000511769 LRRC59Q96AG4 307 aaKnown RBP14.87□□□□□ -0.03
PTPN20-225ENST00000511769 CEP152O94986 1710 aa14.86□□□□□ -0.03
PTPN20-225ENST00000511769 MYOM3Q5VTT5 1437 aa14.86□□□□□ -0.03
PTPN20-225ENST00000511769 FAM50AQ14320 339 aaKnown RBP14.86□□□□□ -0.03
PTPN20-225ENST00000511769 C19orf44Q9H6X5 657 aa14.85□□□□□ -0.03
PTPN20-225ENST00000511769 CCDC141Q6ZP82 1450 aa14.85□□□□□ -0.03
PTPN20-225ENST00000511769 MROH1Q8NDA8 1641 aa14.84□□□□□ -0.03
PTPN20-225ENST00000511769 CHD2O14647 1828 aaKnown RBP14.83□□□□□ -0.04
PTPN20-225ENST00000511769 FNBP4Q8N3X1 1017 aaPredicted RBP14.8□□□□□ -0.04
PTPN20-225ENST00000511769 DDX17Q92841 729 aaKnown RBP14.8□□□□□ -0.04
PTPN20-225ENST00000511769 ITGAEP38570 1179 aa14.79□□□□□ -0.04
PTPN20-225ENST00000511769 PTPN23Q9H3S7 1636 aa14.78□□□□□ -0.04
PTPN20-225ENST00000511769 UNC13BO14795 1591 aa14.77□□□□□ -0.05
PTPN20-225ENST00000511769 ARHGAP31Q2M1Z3 1444 aa14.77□□□□□ -0.05
PTPN20-225ENST00000511769 IDI1Q13907 227 aa14.76□□□□□ -0.05
PTPN20-225ENST00000511769 R3HDM1Q15032 1099 aaKnown RBP14.76□□□□□ -0.05
PTPN20-225ENST00000511769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
PTPN20-225ENST00000511769 EIF2AK4Q9P2K8 1649 aaKnown RBP14.75□□□□□ -0.05
PTPN20-225ENST00000511769 NPM3O75607 178 aaKnown RBP14.75□□□□□ -0.05
PTPN20-225ENST00000511769 GJD4Q96KN9 370 aaPredicted RBP14.75□□□□□ -0.05
PTPN20-225ENST00000511769 PTCH1Q13635 1447 aa14.75□□□□□ -0.05
PTPN20-225ENST00000511769 C1QTNF8P60827 252 aa14.73□□□□□ -0.05
PTPN20-225ENST00000511769 PLEKHG1Q9ULL1 1385 aa14.73□□□□□ -0.05
PTPN20-225ENST00000511769 MST1RQ04912 1400 aa14.73□□□□□ -0.05
PTPN20-225ENST00000511769 ADGRB3O60242 1522 aa14.73□□□□□ -0.05
PTPN20-225ENST00000511769 PPP1R15AO75807 674 aaPredicted RBP14.72□□□□□ -0.05
PTPN20-225ENST00000511769 BAG6P46379 1132 aa14.72□□□□□ -0.05
PTPN20-225ENST00000511769 RSPH4AQ5TD94 716 aa14.72□□□□□ -0.05
PTPN20-225ENST00000511769 ZNF784Q8NCA9 323 aaPredicted RBP14.72□□□□□ -0.05
PTPN20-225ENST00000511769 DCCP43146 1447 aa14.71□□□□□ -0.05
PTPN20-225ENST00000511769 TSPY4P0CV99 314 aa14.71□□□□□ -0.05
PTPN20-225ENST00000511769 TSPY10P0CW01 314 aa14.71□□□□□ -0.05
PTPN20-225ENST00000511769 TBX22Q9Y458 520 aa14.69□□□□□ -0.06
PTPN20-225ENST00000511769 SPHKAPQ2M3C7 1700 aa14.69□□□□□ -0.06
PTPN20-225ENST00000511769 BRWD3Q6RI45 1802 aa14.68□□□□□ -0.06
PTPN20-225ENST00000511769 RALGAPBQ86X10 1494 aa14.68□□□□□ -0.06
PTPN20-225ENST00000511769 GLI3P10071 1580 aa14.68□□□□□ -0.06
PTPN20-225ENST00000511769 ZFYVE9O95405 1425 aa14.66□□□□□ -0.06
PTPN20-225ENST00000511769 ARHGEF5Q12774 1597 aa14.66□□□□□ -0.06
PTPN20-225ENST00000511769 EN1Q05925 392 aaPredicted RBP14.66□□□□□ -0.06
PTPN20-225ENST00000511769 SEPT12Q8IYM1 358 aa14.65□□□□□ -0.06
PTPN20-225ENST00000511769 CHIC2Q9UKJ5 165 aa14.65□□□□□ -0.06
PTPN20-225ENST00000511769 RIMS2Q9UQ26 1411 aa14.65□□□□□ -0.06
PTPN20-225ENST00000511769 DAPK1P53355 1430 aa14.64□□□□□ -0.07
PTPN20-225ENST00000511769 ABCC5O15440 1437 aa14.63□□□□□ -0.07
PTPN20-225ENST00000511769 ADAMTS13Q76LX8 1427 aa14.63□□□□□ -0.07
PTPN20-225ENST00000511769 PPP1R1BQ9UD71 204 aaPredicted RBP14.63□□□□□ -0.07
PTPN20-225ENST00000511769 AMOTL2Q9Y2J4 779 aa14.63□□□□□ -0.07
PTPN20-225ENST00000511769 PIK3R4Q99570 1358 aa14.62□□□□□ -0.07
PTPN20-225ENST00000511769 TRPM2O94759 1503 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms