RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 KDM4FA0A1W2PPD8 638 aa12.07□□□□□ -0.48
SMAD1-210ENST00000511255 POGZQ7Z3K3 1410 aa12.07□□□□□ -0.48
SMAD1-210ENST00000511255 BBXQ8WY36 941 aaPredicted RBP12.07□□□□□ -0.48
SMAD1-210ENST00000511255 CFDP1Q9UEE9 299 aaPredicted RBP12.07□□□□□ -0.48
SMAD1-210ENST00000511255 ARID4BQ4LE39 1312 aaPredicted RBP12.07□□□□□ -0.48
SMAD1-210ENST00000511255 RICTORQ6R327 1708 aa12.06□□□□□ -0.48
SMAD1-210ENST00000511255 CDC42BPBQ9Y5S2 1711 aa12.06□□□□□ -0.48
SMAD1-210ENST00000511255 TIAM1Q13009 1591 aa12.06□□□□□ -0.48
SMAD1-210ENST00000511255 CDC42BPAQ5VT25 1732 aa12.05□□□□□ -0.48
SMAD1-210ENST00000511255 GPATCH8Q9UKJ3 1502 aaKnown RBP12.05□□□□□ -0.48
SMAD1-210ENST00000511255 ZNF518AQ6AHZ1 1483 aa12.04□□□□□ -0.48
SMAD1-210ENST00000511255 AFAP1Q8N556 730 aa12.04□□□□□ -0.48
SMAD1-210ENST00000511255 ZFYVE16Q7Z3T8 1539 aa12.04□□□□□ -0.48
SMAD1-210ENST00000511255 ARHGEF40Q8TER5 1519 aa12.04□□□□□ -0.48
SMAD1-210ENST00000511255 ZMYM4Q5VZL5 1548 aa12.03□□□□□ -0.48
SMAD1-210ENST00000511255 G3V3G9 751 aa12.03□□□□□ -0.48
SMAD1-210ENST00000511255 SUPT6HQ7KZ85 1726 aaKnown RBP12.03□□□□□ -0.48
SMAD1-210ENST00000511255 YEATS2Q9ULM3 1422 aa12.03□□□□□ -0.48
SMAD1-210ENST00000511255 NCOA2Q15596 1464 aa12.02□□□□□ -0.48
SMAD1-210ENST00000511255 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.48
SMAD1-210ENST00000511255 ABCC1P33527 1531 aa12.02□□□□□ -0.48
SMAD1-210ENST00000511255 TMEM92Q6UXU6 159 aa12.02□□□□□ -0.49
SMAD1-210ENST00000511255 MAGI2Q86UL8 1455 aa12.02□□□□□ -0.49
SMAD1-210ENST00000511255 HNRNPMP52272 730 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMAD1-210ENST00000511255 KANK4Q5T7N3 995 aaPredicted RBP12.01□□□□□ -0.49
SMAD1-210ENST00000511255 TRAPPC8Q9Y2L5 1435 aa12.01□□□□□ -0.49
SMAD1-210ENST00000511255 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
SMAD1-210ENST00000511255 SYCP2Q9BX26 1530 aa12□□□□□ -0.49
SMAD1-210ENST00000511255 SAMD9LQ8IVG5 1584 aa12□□□□□ -0.49
SMAD1-210ENST00000511255 ITSN2Q9NZM3 1697 aa12□□□□□ -0.49
SMAD1-210ENST00000511255 PLEKHH2Q8IVE3 1493 aa11.99□□□□□ -0.49
SMAD1-210ENST00000511255 MAP3K1Q13233 1512 aa11.99□□□□□ -0.49
SMAD1-210ENST00000511255 KDM5CP41229 1560 aa11.98□□□□□ -0.49
SMAD1-210ENST00000511255 ZNF644Q9H582 1327 aaPredicted RBP11.98□□□□□ -0.49
SMAD1-210ENST00000511255 MLECQ14165 292 aa11.98□□□□□ -0.49
SMAD1-210ENST00000511255 RYDENQ9NUL5 291 aaKnown RBP11.98□□□□□ -0.49
SMAD1-210ENST00000511255 HECW2Q9P2P5 1572 aa11.97□□□□□ -0.49
SMAD1-210ENST00000511255 ATP10AO60312 1499 aa11.97□□□□□ -0.49
SMAD1-210ENST00000511255 C9orf84Q5VXU9 1444 aa11.97□□□□□ -0.49
SMAD1-210ENST00000511255 SPAG9O60271 1321 aaKnown RBP11.97□□□□□ -0.49
SMAD1-210ENST00000511255 HOXB3P14651 431 aaPredicted RBP11.97□□□□□ -0.49
SMAD1-210ENST00000511255 KIAA1107Q9UPP5 1409 aa11.96□□□□□ -0.49
SMAD1-210ENST00000511255 MLH3Q9UHC1 1453 aa11.95□□□□□ -0.5
SMAD1-210ENST00000511255 CAMSAP2Q08AD1 1489 aa11.94□□□□□ -0.5
SMAD1-210ENST00000511255 BCORL1Q5H9F3 1711 aa11.94□□□□□ -0.5
SMAD1-210ENST00000511255 DIP2CQ9Y2E4 1556 aa11.93□□□□□ -0.5
SMAD1-210ENST00000511255 ABCA6Q8N139 1617 aa11.92□□□□□ -0.5
SMAD1-210ENST00000511255 MYOM3Q5VTT5 1437 aa11.92□□□□□ -0.5
SMAD1-210ENST00000511255 ADAMTSL3P82987 1691 aa11.91□□□□□ -0.5
SMAD1-210ENST00000511255 KIDINS220Q9ULH0 1771 aa11.91□□□□□ -0.5
SMAD1-210ENST00000511255 SIGLEC1Q9BZZ2 1709 aa11.91□□□□□ -0.5
SMAD1-210ENST00000511255 ATP7AQ04656 1500 aa11.91□□□□□ -0.5
SMAD1-210ENST00000511255 CCDC141Q6ZP82 1450 aa11.9□□□□□ -0.5
SMAD1-210ENST00000511255 MBD5Q9P267 1494 aa11.9□□□□□ -0.5
SMAD1-210ENST00000511255 MADDQ8WXG6 1647 aa11.9□□□□□ -0.5
SMAD1-210ENST00000511255 KIF3CO14782 793 aa11.9□□□□□ -0.5
SMAD1-210ENST00000511255 HOXB1P14653 301 aaPredicted RBP11.9□□□□□ -0.5
SMAD1-210ENST00000511255 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
SMAD1-210ENST00000511255 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.9□□□□□ -0.5
SMAD1-210ENST00000511255 MIA2Q96PC5 1412 aa11.89□□□□□ -0.51
SMAD1-210ENST00000511255 TSPY4P0CV99 314 aa11.89□□□□□ -0.51
SMAD1-210ENST00000511255 TSPY10P0CW01 314 aa11.89□□□□□ -0.51
SMAD1-210ENST00000511255 RSPH4AQ5TD94 716 aa11.89□□□□□ -0.51
SMAD1-210ENST00000511255 ESF1Q9H501 851 aaKnown RBP11.89□□□□□ -0.51
SMAD1-210ENST00000511255 PTPRMP28827 1452 aa11.89□□□□□ -0.51
SMAD1-210ENST00000511255 RIMS1Q86UR5 1692 aaKnown RBP11.88□□□□□ -0.51
SMAD1-210ENST00000511255 C2orf72A6NCS6 295 aa11.88□□□□□ -0.51
SMAD1-210ENST00000511255 PAXIP1Q6ZW49 1069 aaPredicted RBP11.88□□□□□ -0.51
SMAD1-210ENST00000511255 INO80Q9ULG1 1556 aaPredicted RBP11.88□□□□□ -0.51
SMAD1-210ENST00000511255 PPARGC1BQ86YN6 1023 aaKnown RBP11.87□□□□□ -0.51
SMAD1-210ENST00000511255 REREQ9P2R6 1566 aa11.87□□□□□ -0.51
SMAD1-210ENST00000511255 A2MP01023 1474 aa11.86□□□□□ -0.51
SMAD1-210ENST00000511255 RTEL1-TNFRSF6BF6WH68 1400 aa11.86□□□□□ -0.51
SMAD1-210ENST00000511255 FER1L4A9Z1Z3 1794 aa11.85□□□□□ -0.51
SMAD1-210ENST00000511255 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
SMAD1-210ENST00000511255 AGLP35573 1532 aa11.85□□□□□ -0.51
SMAD1-210ENST00000511255 FGD6Q6ZV73 1430 aa11.85□□□□□ -0.51
SMAD1-210ENST00000511255 ARHGEF5Q12774 1597 aa11.84□□□□□ -0.51
SMAD1-210ENST00000511255 GGT6Q6P531 493 aa11.84□□□□□ -0.51
SMAD1-210ENST00000511255 RNF166Q96A37 237 aaPredicted RBP11.84□□□□□ -0.51
SMAD1-210ENST00000511255 PTPN23Q9H3S7 1636 aa11.84□□□□□ -0.51
SMAD1-210ENST00000511255 FAM50AQ14320 339 aaKnown RBP11.83□□□□□ -0.52
SMAD1-210ENST00000511255 CADPS2Q86UW7 1296 aa11.83□□□□□ -0.52
SMAD1-210ENST00000511255 ERBB3P21860 1342 aa11.83□□□□□ -0.52
SMAD1-210ENST00000511255 ADGBQ8N7X0 1667 aa11.82□□□□□ -0.52
SMAD1-210ENST00000511255 CEBPAP49715 358 aaPredicted RBP11.82□□□□□ -0.52
SMAD1-210ENST00000511255 DHX29Q7Z478 1369 aaKnown RBP11.81□□□□□ -0.52
SMAD1-210ENST00000511255 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
SMAD1-210ENST00000511255 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
SMAD1-210ENST00000511255 NCKAP5LQ9HCH0 1330 aa11.81□□□□□ -0.52
SMAD1-210ENST00000511255 PLXNC1O60486 1568 aa11.8□□□□□ -0.52
SMAD1-210ENST00000511255 KIF3BO15066 747 aa11.8□□□□□ -0.52
SMAD1-210ENST00000511255 TMC2Q8TDI7 906 aa11.8□□□□□ -0.52
SMAD1-210ENST00000511255 CRISPLD2Q9H0B8 497 aa11.8□□□□□ -0.52
SMAD1-210ENST00000511255 TCOF1Q13428 1488 aaKnown RBP11.79□□□□□ -0.52
SMAD1-210ENST00000511255 CHIC2Q9UKJ5 165 aa11.79□□□□□ -0.52
SMAD1-210ENST00000511255 ABCC5O15440 1437 aa11.78□□□□□ -0.52
SMAD1-210ENST00000511255 DAPK1P53355 1430 aa11.78□□□□□ -0.52
SMAD1-210ENST00000511255 MAST1Q9Y2H9 1570 aa11.78□□□□□ -0.52
SMAD1-210ENST00000511255 CNTLNQ9NXG0 1405 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms