RNA–Protein interactions for RNA: ENST00000510871.5

RBM47-207, Transcript of RNA binding motif protein 47, humanhuman

TSL 1 (best)

Gene RBM47, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-207ENST00000510871 PTPRKQ15262 1439 aa17.08■□□□□ 0.32
RBM47-207ENST00000510871 C11orf95C9JLR9 678 aaPredicted RBP17.08■□□□□ 0.32
RBM47-207ENST00000510871 KIF14Q15058 1648 aa17.07■□□□□ 0.32
RBM47-207ENST00000510871 PNISRQ8TF01 805 aaKnown RBP17.07■□□□□ 0.32
RBM47-207ENST00000510871 COG6Q9Y2V7 657 aa17.07■□□□□ 0.32
RBM47-207ENST00000510871 MAPKBP1O60336 1514 aa17.07■□□□□ 0.32
RBM47-207ENST00000510871 PPP2R1AP30153 589 aa17.07■□□□□ 0.32
RBM47-207ENST00000510871 COG3Q96JB2 828 aa17.07■□□□□ 0.32
RBM47-207ENST00000510871 RUNDC1Q96C34 613 aa17.06■□□□□ 0.32
RBM47-207ENST00000510871 CFAP44Q96MT7 982 aa17.06■□□□□ 0.32
RBM47-207ENST00000510871 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
RBM47-207ENST00000510871 CDCA7LQ96GN5 454 aa17.06■□□□□ 0.32
RBM47-207ENST00000510871 ZKSCAN2Q63HK3 967 aa17.05■□□□□ 0.32
RBM47-207ENST00000510871 AMPHP49418 695 aa17.05■□□□□ 0.32
RBM47-207ENST00000510871 DIAPH1O60610 1272 aaKnown RBP17.05■□□□□ 0.32
RBM47-207ENST00000510871 CABP2Q9NPB3 220 aa17.05■□□□□ 0.32
RBM47-207ENST00000510871 UGGT2Q9NYU1 1516 aa17.04■□□□□ 0.32
RBM47-207ENST00000510871 STK31Q9BXU1 1019 aa17.04■□□□□ 0.32
RBM47-207ENST00000510871 ERBINQ96RT1 1412 aa17.04■□□□□ 0.32
RBM47-207ENST00000510871 MFAP1P55081 439 aaKnown RBP17.04■□□□□ 0.32
RBM47-207ENST00000510871 SLKQ9H2G2 1235 aaPredicted RBP17.04■□□□□ 0.32
RBM47-207ENST00000510871 CTTNBP2Q8WZ74 1663 aa17.03■□□□□ 0.32
RBM47-207ENST00000510871 UBE2Q2Q8WVN8 375 aa17.03■□□□□ 0.32
RBM47-207ENST00000510871 ELL2O00472 640 aaPredicted RBP17.03■□□□□ 0.32
RBM47-207ENST00000510871 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
RBM47-207ENST00000510871 RPRD2Q5VT52 1461 aaKnown RBP17.02■□□□□ 0.32
RBM47-207ENST00000510871 GSE1Q14687 1217 aa17.01■□□□□ 0.31
RBM47-207ENST00000510871 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
RBM47-207ENST00000510871 GGNBP2Q9H3C7 697 aa17.01■□□□□ 0.31
RBM47-207ENST00000510871 MCCP23508 829 aa17■□□□□ 0.31
RBM47-207ENST00000510871 KCNJ4P48050 445 aa17■□□□□ 0.31
RBM47-207ENST00000510871 RIPK4P57078 832 aa17■□□□□ 0.31
RBM47-207ENST00000510871 LTV1Q96GA3 475 aaPredicted RBP16.99■□□□□ 0.31
RBM47-207ENST00000510871 GPATCH8Q9UKJ3 1502 aaKnown RBP16.99■□□□□ 0.31
RBM47-207ENST00000510871 MTHFSP49914 203 aa16.99■□□□□ 0.31
RBM47-207ENST00000510871 SLC4A10Q6U841 1118 aa16.99■□□□□ 0.31
RBM47-207ENST00000510871 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.99■□□□□ 0.31
RBM47-207ENST00000510871 HSP90AA2PQ14568 343 aaPredicted RBP16.99■□□□□ 0.31
RBM47-207ENST00000510871 CFAP43Q8NDM7 1665 aa16.97■□□□□ 0.31
RBM47-207ENST00000510871 RAPGEF6Q8TEU7 1601 aa16.97■□□□□ 0.31
RBM47-207ENST00000510871 HMMRO75330 724 aa16.96■□□□□ 0.31
RBM47-207ENST00000510871 SLC12A5Q9H2X9 1139 aa16.96■□□□□ 0.31
RBM47-207ENST00000510871 SMG6Q86US8 1419 aaKnown RBP16.96■□□□□ 0.31
RBM47-207ENST00000510871 NUP153P49790 1475 aaKnown RBP16.96■□□□□ 0.3
RBM47-207ENST00000510871 CSB-PGBD3P0DP91 1061 aa16.95■□□□□ 0.3
RBM47-207ENST00000510871 DZIP1LQ8IYY4 767 aaKnown RBP16.95■□□□□ 0.3
RBM47-207ENST00000510871 CHMP4AQ9BY43 222 aa16.95■□□□□ 0.3
RBM47-207ENST00000510871 RAPGEF3O95398 923 aa16.95■□□□□ 0.3
RBM47-207ENST00000510871 TCP11L2Q8N4U5 519 aa16.94■□□□□ 0.3
RBM47-207ENST00000510871 DDX19BQ9UMR2 479 aa16.93■□□□□ 0.3
RBM47-207ENST00000510871 MSH5O43196 834 aa16.92■□□□□ 0.3
RBM47-207ENST00000510871 SLC4A3P48751 1232 aa16.92■□□□□ 0.3
RBM47-207ENST00000510871 PTMAP06454 111 aaKnown RBP16.92■□□□□ 0.3
RBM47-207ENST00000510871 FGD1P98174 961 aa16.92■□□□□ 0.3
RBM47-207ENST00000510871 PANK1Q8TE04 598 aa16.92■□□□□ 0.3
RBM47-207ENST00000510871 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
RBM47-207ENST00000510871 PRAM1Q96QH2 718 aa16.91■□□□□ 0.3
RBM47-207ENST00000510871 HMOX1P09601 288 aa16.91■□□□□ 0.3
RBM47-207ENST00000510871 ANKRD45Q5TZF3 282 aa16.91■□□□□ 0.3
RBM47-207ENST00000510871 IL27Q8NEV9 243 aa16.9■□□□□ 0.3
RBM47-207ENST00000510871 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
RBM47-207ENST00000510871 SLC52A1Q9NWF4 448 aa16.9■□□□□ 0.3
RBM47-207ENST00000510871 ATP10BO94823 1461 aa16.9■□□□□ 0.3
RBM47-207ENST00000510871 KIAA1211Q6ZU35 1233 aa16.89■□□□□ 0.29
RBM47-207ENST00000510871 GBP4Q96PP9 640 aa16.89■□□□□ 0.29
RBM47-207ENST00000510871 RPGRIP1LQ68CZ1 1315 aa16.89■□□□□ 0.29
RBM47-207ENST00000510871 DNTTIP2Q5QJE6 756 aaKnown RBP16.89■□□□□ 0.29
RBM47-207ENST00000510871 WDR62O43379 1518 aa16.87■□□□□ 0.29
RBM47-207ENST00000510871 MSNP26038 577 aaKnown RBP16.87■□□□□ 0.29
RBM47-207ENST00000510871 KIAA0556O60303 1618 aa16.87■□□□□ 0.29
RBM47-207ENST00000510871 GOLGA6L3A6NEY3 463 aa16.87■□□□□ 0.29
RBM47-207ENST00000510871 TRIM6-TRIM34B2RNG4 842 aa16.87■□□□□ 0.29
RBM47-207ENST00000510871 GNAI1P63096 354 aa16.86■□□□□ 0.29
RBM47-207ENST00000510871 GZF1Q9H116 711 aaPredicted RBP16.86■□□□□ 0.29
RBM47-207ENST00000510871 ADGRL1O94910 1474 aa16.86■□□□□ 0.29
RBM47-207ENST00000510871 KIF16BQ96L93 1317 aa16.86■□□□□ 0.29
RBM47-207ENST00000510871 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
RBM47-207ENST00000510871 PDE4CQ08493 712 aa16.85■□□□□ 0.29
RBM47-207ENST00000510871 API5Q9BZZ5 524 aaKnown RBP16.85■□□□□ 0.29
RBM47-207ENST00000510871 NAP1L2Q9ULW6 460 aaPredicted RBP16.85■□□□□ 0.29
RBM47-207ENST00000510871 ZRSR1Q15695 479 aaKnown RBP16.85■□□□□ 0.29
RBM47-207ENST00000510871 AAMPQ13685 434 aa16.84■□□□□ 0.29
RBM47-207ENST00000510871 ITSN2Q9NZM3 1697 aa16.84■□□□□ 0.29
RBM47-207ENST00000510871 HDAC5Q9UQL6 1122 aa16.84■□□□□ 0.29
RBM47-207ENST00000510871 CDK19Q9BWU1 502 aa16.83■□□□□ 0.28
RBM47-207ENST00000510871 CD109Q6YHK3 1445 aa16.83■□□□□ 0.28
RBM47-207ENST00000510871 BCAR3O75815 825 aa16.82■□□□□ 0.28
RBM47-207ENST00000510871 FOXD4L1Q9NU39 408 aa16.82■□□□□ 0.28
RBM47-207ENST00000510871 PLCB2Q00722 1185 aa16.82■□□□□ 0.28
RBM47-207ENST00000510871 CABP1Q9NZU7 370 aa16.82■□□□□ 0.28
RBM47-207ENST00000510871 PTMSP20962 102 aa16.81■□□□□ 0.28
RBM47-207ENST00000510871 TXNDC2Q86VQ3 553 aa16.8■□□□□ 0.28
RBM47-207ENST00000510871 TAOK2Q9UL54 1235 aa16.8■□□□□ 0.28
RBM47-207ENST00000510871 PRKAR2BP31323 418 aa16.8■□□□□ 0.28
RBM47-207ENST00000510871 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
RBM47-207ENST00000510871 EXOSC9Q06265 439 aaKnown RBP16.8■□□□□ 0.28
RBM47-207ENST00000510871 ADGRF5Q8IZF2 1346 aa16.79■□□□□ 0.28
RBM47-207ENST00000510871 PDE3AQ14432 1141 aa16.79■□□□□ 0.28
RBM47-207ENST00000510871 GPATCH3Q96I76 525 aa16.79■□□□□ 0.28
RBM47-207ENST00000510871 GOLGA6L4A6NEF3 574 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms