RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 PRR20EP86478 221 aa5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 PRR20CP86479 221 aa5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 PRR20DP86480 221 aa5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 PRR20BP86481 221 aa5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 PRR20AP86496 221 aa5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 ZNF598Q86UK7 904 aaKnown RBP5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 ANKLE1Q8NAG6 615 aa5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 RBM46Q8TBY0 533 aaKnown RBP5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 SPRYD7Q5W111 196 aa5.74□□□□□ -1.49
HMGB3P3-201ENST00000510526 BLOC1S3Q6QNY0 202 aa5.74□□□□□ -1.49
HMGB3P3-201ENST00000510526 ACTN4O43707 911 aaKnown RBP5.73□□□□□ -1.49
HMGB3P3-201ENST00000510526 ZNF775Q96BV0 537 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P3-201ENST00000510526 TMEM134Q9H6X4 195 aa5.73□□□□□ -1.49
HMGB3P3-201ENST00000510526 TRIM67Q6ZTA4 783 aa5.72□□□□□ -1.49
HMGB3P3-201ENST00000510526 ARHGEF1Q92888 912 aaKnown RBP5.72□□□□□ -1.49
HMGB3P3-201ENST00000510526 NR1I2O75469 434 aa5.71□□□□□ -1.5
HMGB3P3-201ENST00000510526 MYT1Q01538 1121 aa5.71□□□□□ -1.5
HMGB3P3-201ENST00000510526 PTGDRQ13258 359 aa5.71□□□□□ -1.5
HMGB3P3-201ENST00000510526 ADH1BP00325 375 aa5.7□□□□□ -1.5
HMGB3P3-201ENST00000510526 RSPH4AQ5TD94 716 aa5.7□□□□□ -1.5
HMGB3P3-201ENST00000510526 ZNF697Q5TEC3 545 aa5.7□□□□□ -1.5
HMGB3P3-201ENST00000510526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 TLL1O43897 1013 aa5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 S1PR4O95977 384 aa5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 CFHP08603 1231 aa5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 AMER1Q5JTC6 1135 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 LMOD2Q6P5Q4 547 aa5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 ADGRG1Q9Y653 693 aa5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 RCCD1A6NED2 376 aa5.68□□□□□ -1.5
HMGB3P3-201ENST00000510526 FAM187AA6NFU0 413 aa5.68□□□□□ -1.5
HMGB3P3-201ENST00000510526 LIAT1Q6ZQX7 453 aa5.68□□□□□ -1.5
HMGB3P3-201ENST00000510526 EMID1Q96A84 441 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P3-201ENST00000510526 SLC6A16Q9GZN6 736 aa5.68□□□□□ -1.5
HMGB3P3-201ENST00000510526 PPEF1O14829 653 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P3-201ENST00000510526 GDF9O60383 454 aa5.67□□□□□ -1.5
HMGB3P3-201ENST00000510526 OATP04181 439 aa5.67□□□□□ -1.5
HMGB3P3-201ENST00000510526 MLLT3P42568 568 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P3-201ENST00000510526 NUTM2FA1L443 756 aa5.66□□□□□ -1.5
HMGB3P3-201ENST00000510526 FCHSD2O94868 740 aa5.66□□□□□ -1.5
HMGB3P3-201ENST00000510526 SCUBE3Q8IX30 993 aa5.65□□□□□ -1.5
HMGB3P3-201ENST00000510526 TNFRSF10AO00220 468 aa5.64□□□□□ -1.51
HMGB3P3-201ENST00000510526 SLC10A3P09131 477 aa5.64□□□□□ -1.51
HMGB3P3-201ENST00000510526 RPIAP49247 311 aa5.63□□□□□ -1.51
HMGB3P3-201ENST00000510526 P3H3Q8IVL6 736 aa5.63□□□□□ -1.51
HMGB3P3-201ENST00000510526 KCNV2Q8TDN2 545 aa5.63□□□□□ -1.51
HMGB3P3-201ENST00000510526 PXYLP1Q8TE99 480 aa5.63□□□□□ -1.51
HMGB3P3-201ENST00000510526 SPSB2Q99619 263 aa5.63□□□□□ -1.51
HMGB3P3-201ENST00000510526 AAASQ9NRG9 546 aa5.63□□□□□ -1.51
HMGB3P3-201ENST00000510526 CD2BP2O95400 341 aaKnown RBP5.62□□□□□ -1.51
HMGB3P3-201ENST00000510526 TREML4Q6UXN2 200 aa5.62□□□□□ -1.51
HMGB3P3-201ENST00000510526 CRIPAKQ8N1N5 446 aa5.62□□□□□ -1.51
HMGB3P3-201ENST00000510526 POTECB2RU33 542 aa5.61□□□□□ -1.51
HMGB3P3-201ENST00000510526 FOXC1Q12948 553 aa5.61□□□□□ -1.51
HMGB3P3-201ENST00000510526 HIC1Q14526 733 aa5.61□□□□□ -1.51
HMGB3P3-201ENST00000510526 FAM161AQ3B820 660 aa5.61□□□□□ -1.51
HMGB3P3-201ENST00000510526 PLA2G2CQ5R387 149 aa5.61□□□□□ -1.51
HMGB3P3-201ENST00000510526 CTC1Q2NKJ3 1217 aa5.6□□□□□ -1.51
HMGB3P3-201ENST00000510526 PKD2L1Q9P0L9 805 aa5.6□□□□□ -1.51
HMGB3P3-201ENST00000510526 ST8SIA5O15466 376 aa5.59□□□□□ -1.51
HMGB3P3-201ENST00000510526 FMNL1O95466 1100 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P3-201ENST00000510526 AVPP01185 164 aa5.59□□□□□ -1.51
HMGB3P3-201ENST00000510526 PUS10Q3MIT2 529 aaKnown RBP5.59□□□□□ -1.51
HMGB3P3-201ENST00000510526 METTL3Q86U44 580 aaKnown RBP5.59□□□□□ -1.51
HMGB3P3-201ENST00000510526 CYP4X1Q8N118 509 aa5.59□□□□□ -1.51
HMGB3P3-201ENST00000510526 AXIN1O15169 862 aa5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 ZBTB24O43167 697 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 ATP6V1AP38606 617 aa5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 SMYD5Q6GMV2 418 aa5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 RDH13Q8NBN7 331 aa5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 TOR4AQ9NXH8 423 aa5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 DAXXQ9UER7 740 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 SALL2Q9Y467 1007 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 SMCPP49901 116 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P3-201ENST00000510526 MORN1Q5T089 497 aa5.57□□□□□ -1.52
HMGB3P3-201ENST00000510526 SULF1Q8IWU6 871 aa5.57□□□□□ -1.52
HMGB3P3-201ENST00000510526 FCF1Q9Y324 198 aaKnown RBP5.57□□□□□ -1.52
HMGB3P3-201ENST00000510526 C11orf95C9JLR9 678 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P3-201ENST00000510526 GRIPAP1Q4V328 841 aa5.56□□□□□ -1.52
HMGB3P3-201ENST00000510526 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P3-201ENST00000510526 THAP11Q96EK4 314 aa5.56□□□□□ -1.52
HMGB3P3-201ENST00000510526 TSHZ2Q9NRE2 1034 aa5.56□□□□□ -1.52
HMGB3P3-201ENST00000510526 TTC24A2A3L6 582 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P3-201ENST00000510526 SEMA3EO15041 775 aa5.55□□□□□ -1.52
HMGB3P3-201ENST00000510526 WFS1O76024 890 aa5.55□□□□□ -1.52
HMGB3P3-201ENST00000510526 FUT2Q10981 343 aa5.55□□□□□ -1.52
HMGB3P3-201ENST00000510526 DDX11L8A8MPP1 907 aa5.54□□□□□ -1.52
HMGB3P3-201ENST00000510526 GNPATO15228 680 aa5.54□□□□□ -1.52
HMGB3P3-201ENST00000510526 RTN4Q9NQC3 1192 aaKnown RBP5.54□□□□□ -1.52
HMGB3P3-201ENST00000510526 GCGRP47871 477 aa5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 INSM1Q01101 510 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 MSS51Q4VC12 460 aa5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 FAM160A2Q8N612 972 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 GMPR2Q9P2T1 348 aaKnown RBP5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 STK17AQ9UEE5 414 aa5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 SLC27A5Q9Y2P5 690 aa5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 Q3C1V9 767 aa5.52□□□□□ -1.53
HMGB3P3-201ENST00000510526 BRICD5Q6PL45 260 aa5.52□□□□□ -1.53
HMGB3P3-201ENST00000510526 SNIP1Q8TAD8 396 aaKnown RBP5.52□□□□□ -1.53
HMGB3P3-201ENST00000510526 SENP2Q9HC62 589 aa5.52□□□□□ -1.53
HMGB3P3-201ENST00000510526 DACH1Q9UI36 760 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms