RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 PRR20EP86478 221 aa5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 PRR20CP86479 221 aa5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 PRR20DP86480 221 aa5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 PRR20BP86481 221 aa5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 PRR20AP86496 221 aa5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 ZNF598Q86UK7 904 aaKnown RBP5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 ANKLE1Q8NAG6 615 aa5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 RBM46Q8TBY0 533 aaKnown RBP5.75□□□□□ -1.49
HMGB3P3-201ENST00000510526 SPRYD7Q5W111 196 aa5.74□□□□□ -1.49
HMGB3P3-201ENST00000510526 BLOC1S3Q6QNY0 202 aa5.74□□□□□ -1.49
HMGB3P3-201ENST00000510526 ACTN4O43707 911 aaKnown RBP5.73□□□□□ -1.49
HMGB3P3-201ENST00000510526 ZNF775Q96BV0 537 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P3-201ENST00000510526 TMEM134Q9H6X4 195 aa5.73□□□□□ -1.49
HMGB3P3-201ENST00000510526 TRIM67Q6ZTA4 783 aa5.72□□□□□ -1.49
HMGB3P3-201ENST00000510526 ARHGEF1Q92888 912 aaKnown RBP5.72□□□□□ -1.49
HMGB3P3-201ENST00000510526 NR1I2O75469 434 aa5.71□□□□□ -1.5
HMGB3P3-201ENST00000510526 MYT1Q01538 1121 aa5.71□□□□□ -1.5
HMGB3P3-201ENST00000510526 PTGDRQ13258 359 aa5.71□□□□□ -1.5
HMGB3P3-201ENST00000510526 ADH1BP00325 375 aa5.7□□□□□ -1.5
HMGB3P3-201ENST00000510526 RSPH4AQ5TD94 716 aa5.7□□□□□ -1.5
HMGB3P3-201ENST00000510526 ZNF697Q5TEC3 545 aa5.7□□□□□ -1.5
HMGB3P3-201ENST00000510526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 TLL1O43897 1013 aa5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 S1PR4O95977 384 aa5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 CFHP08603 1231 aa5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 AMER1Q5JTC6 1135 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 LMOD2Q6P5Q4 547 aa5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 ADGRG1Q9Y653 693 aa5.69□□□□□ -1.5
HMGB3P3-201ENST00000510526 RCCD1A6NED2 376 aa5.68□□□□□ -1.5
HMGB3P3-201ENST00000510526 FAM187AA6NFU0 413 aa5.68□□□□□ -1.5
HMGB3P3-201ENST00000510526 LIAT1Q6ZQX7 453 aa5.68□□□□□ -1.5
HMGB3P3-201ENST00000510526 EMID1Q96A84 441 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P3-201ENST00000510526 SLC6A16Q9GZN6 736 aa5.68□□□□□ -1.5
HMGB3P3-201ENST00000510526 PPEF1O14829 653 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P3-201ENST00000510526 GDF9O60383 454 aa5.67□□□□□ -1.5
HMGB3P3-201ENST00000510526 OATP04181 439 aa5.67□□□□□ -1.5
HMGB3P3-201ENST00000510526 MLLT3P42568 568 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P3-201ENST00000510526 NUTM2FA1L443 756 aa5.66□□□□□ -1.5
HMGB3P3-201ENST00000510526 FCHSD2O94868 740 aa5.66□□□□□ -1.5
HMGB3P3-201ENST00000510526 SCUBE3Q8IX30 993 aa5.65□□□□□ -1.5
HMGB3P3-201ENST00000510526 TNFRSF10AO00220 468 aa5.64□□□□□ -1.51
HMGB3P3-201ENST00000510526 SLC10A3P09131 477 aa5.64□□□□□ -1.51
HMGB3P3-201ENST00000510526 RPIAP49247 311 aa5.63□□□□□ -1.51
HMGB3P3-201ENST00000510526 P3H3Q8IVL6 736 aa5.63□□□□□ -1.51
HMGB3P3-201ENST00000510526 KCNV2Q8TDN2 545 aa5.63□□□□□ -1.51
HMGB3P3-201ENST00000510526 PXYLP1Q8TE99 480 aa5.63□□□□□ -1.51
HMGB3P3-201ENST00000510526 SPSB2Q99619 263 aa5.63□□□□□ -1.51
HMGB3P3-201ENST00000510526 AAASQ9NRG9 546 aa5.63□□□□□ -1.51
HMGB3P3-201ENST00000510526 CD2BP2O95400 341 aaKnown RBP5.62□□□□□ -1.51
HMGB3P3-201ENST00000510526 TREML4Q6UXN2 200 aa5.62□□□□□ -1.51
HMGB3P3-201ENST00000510526 CRIPAKQ8N1N5 446 aa5.62□□□□□ -1.51
HMGB3P3-201ENST00000510526 POTECB2RU33 542 aa5.61□□□□□ -1.51
HMGB3P3-201ENST00000510526 FOXC1Q12948 553 aa5.61□□□□□ -1.51
HMGB3P3-201ENST00000510526 HIC1Q14526 733 aa5.61□□□□□ -1.51
HMGB3P3-201ENST00000510526 FAM161AQ3B820 660 aa5.61□□□□□ -1.51
HMGB3P3-201ENST00000510526 PLA2G2CQ5R387 149 aa5.61□□□□□ -1.51
HMGB3P3-201ENST00000510526 CTC1Q2NKJ3 1217 aa5.6□□□□□ -1.51
HMGB3P3-201ENST00000510526 PKD2L1Q9P0L9 805 aa5.6□□□□□ -1.51
HMGB3P3-201ENST00000510526 ST8SIA5O15466 376 aa5.59□□□□□ -1.51
HMGB3P3-201ENST00000510526 FMNL1O95466 1100 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P3-201ENST00000510526 AVPP01185 164 aa5.59□□□□□ -1.51
HMGB3P3-201ENST00000510526 PUS10Q3MIT2 529 aaKnown RBP5.59□□□□□ -1.51
HMGB3P3-201ENST00000510526 METTL3Q86U44 580 aaKnown RBP5.59□□□□□ -1.51
HMGB3P3-201ENST00000510526 CYP4X1Q8N118 509 aa5.59□□□□□ -1.51
HMGB3P3-201ENST00000510526 AXIN1O15169 862 aa5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 ZBTB24O43167 697 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 ATP6V1AP38606 617 aa5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 SMYD5Q6GMV2 418 aa5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 RDH13Q8NBN7 331 aa5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 TOR4AQ9NXH8 423 aa5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 DAXXQ9UER7 740 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 SALL2Q9Y467 1007 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P3-201ENST00000510526 SMCPP49901 116 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P3-201ENST00000510526 MORN1Q5T089 497 aa5.57□□□□□ -1.52
HMGB3P3-201ENST00000510526 SULF1Q8IWU6 871 aa5.57□□□□□ -1.52
HMGB3P3-201ENST00000510526 FCF1Q9Y324 198 aaKnown RBP5.57□□□□□ -1.52
HMGB3P3-201ENST00000510526 C11orf95C9JLR9 678 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P3-201ENST00000510526 GRIPAP1Q4V328 841 aa5.56□□□□□ -1.52
HMGB3P3-201ENST00000510526 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P3-201ENST00000510526 THAP11Q96EK4 314 aa5.56□□□□□ -1.52
HMGB3P3-201ENST00000510526 TSHZ2Q9NRE2 1034 aa5.56□□□□□ -1.52
HMGB3P3-201ENST00000510526 TTC24A2A3L6 582 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P3-201ENST00000510526 SEMA3EO15041 775 aa5.55□□□□□ -1.52
HMGB3P3-201ENST00000510526 WFS1O76024 890 aa5.55□□□□□ -1.52
HMGB3P3-201ENST00000510526 FUT2Q10981 343 aa5.55□□□□□ -1.52
HMGB3P3-201ENST00000510526 DDX11L8A8MPP1 907 aa5.54□□□□□ -1.52
HMGB3P3-201ENST00000510526 GNPATO15228 680 aa5.54□□□□□ -1.52
HMGB3P3-201ENST00000510526 RTN4Q9NQC3 1192 aaKnown RBP5.54□□□□□ -1.52
HMGB3P3-201ENST00000510526 GCGRP47871 477 aa5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 INSM1Q01101 510 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 MSS51Q4VC12 460 aa5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 FAM160A2Q8N612 972 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 GMPR2Q9P2T1 348 aaKnown RBP5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 STK17AQ9UEE5 414 aa5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 SLC27A5Q9Y2P5 690 aa5.53□□□□□ -1.52
HMGB3P3-201ENST00000510526 Q3C1V9 767 aa5.52□□□□□ -1.53
HMGB3P3-201ENST00000510526 BRICD5Q6PL45 260 aa5.52□□□□□ -1.53
HMGB3P3-201ENST00000510526 SNIP1Q8TAD8 396 aaKnown RBP5.52□□□□□ -1.53
HMGB3P3-201ENST00000510526 SENP2Q9HC62 589 aa5.52□□□□□ -1.53
HMGB3P3-201ENST00000510526 DACH1Q9UI36 760 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms