RNA–Protein interactions for RNA: ENST00000510224.5

PROM1-210, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PROM1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-210ENST00000510224 UBR1Q8IWV7 1749 aa11.67□□□□□ -0.54
PROM1-210ENST00000510224 IQGAP1P46940 1657 aa11.67□□□□□ -0.54
PROM1-210ENST00000510224 DEPDC5O75140 1603 aa11.67□□□□□ -0.54
PROM1-210ENST00000510224 MPHOSPH9Q99550 1183 aa11.66□□□□□ -0.54
PROM1-210ENST00000510224 SYNMO15061 1565 aa11.66□□□□□ -0.54
PROM1-210ENST00000510224 MED14O60244 1454 aa11.65□□□□□ -0.54
PROM1-210ENST00000510224 LMTK2Q8IWU2 1503 aa11.65□□□□□ -0.54
PROM1-210ENST00000510224 CPS1P31327 1500 aa11.65□□□□□ -0.55
PROM1-210ENST00000510224 AMOTL2Q9Y2J4 779 aa11.64□□□□□ -0.55
PROM1-210ENST00000510224 RPRD2Q5VT52 1461 aaKnown RBP11.64□□□□□ -0.55
PROM1-210ENST00000510224 ATF3P18847 181 aa11.64□□□□□ -0.55
PROM1-210ENST00000510224 VWDEQ8N2E2 1590 aa11.63□□□□□ -0.55
PROM1-210ENST00000510224 TET3O43151 1660 aa11.63□□□□□ -0.55
PROM1-210ENST00000510224 LRRC7Q96NW7 1537 aa11.63□□□□□ -0.55
PROM1-210ENST00000510224 ARHGAP23Q9P227 1491 aa11.63□□□□□ -0.55
PROM1-210ENST00000510224 MSH6P52701 1360 aa11.63□□□□□ -0.55
PROM1-210ENST00000510224 ILDR2Q71H61 639 aa11.63□□□□□ -0.55
PROM1-210ENST00000510224 STK26Q9P289 416 aa11.62□□□□□ -0.55
PROM1-210ENST00000510224 SLIT1O75093 1534 aa11.62□□□□□ -0.55
PROM1-210ENST00000510224 TBX22Q9Y458 520 aa11.62□□□□□ -0.55
PROM1-210ENST00000510224 ADGRB3O60242 1522 aa11.62□□□□□ -0.55
PROM1-210ENST00000510224 NEUROD1Q13562 356 aa11.61□□□□□ -0.55
PROM1-210ENST00000510224 SLAIN2Q9P270 581 aa11.61□□□□□ -0.55
PROM1-210ENST00000510224 E9PCH4 1651 aa11.61□□□□□ -0.55
PROM1-210ENST00000510224 PLEKHG1Q9ULL1 1385 aa11.6□□□□□ -0.55
PROM1-210ENST00000510224 IQSEC2Q5JU85 1478 aa11.6□□□□□ -0.55
PROM1-210ENST00000510224 UNC13BO14795 1591 aa11.6□□□□□ -0.55
PROM1-210ENST00000510224 NUTM2FA1L443 756 aa11.59□□□□□ -0.55
PROM1-210ENST00000510224 VGFO15240 615 aaPredicted RBP11.59□□□□□ -0.55
PROM1-210ENST00000510224 MYO5BQ9ULV0 1848 aa11.59□□□□□ -0.55
PROM1-210ENST00000510224 PLEKHG5O94827 1062 aa11.58□□□□□ -0.55
PROM1-210ENST00000510224 GCC2Q8IWJ2 1684 aa11.58□□□□□ -0.56
PROM1-210ENST00000510224 KDM2AQ9Y2K7 1162 aa11.58□□□□□ -0.56
PROM1-210ENST00000510224 IQGAP3Q86VI3 1631 aa11.57□□□□□ -0.56
PROM1-210ENST00000510224 ZFYVE9O95405 1425 aa11.57□□□□□ -0.56
PROM1-210ENST00000510224 C19orf44Q9H6X5 657 aa11.57□□□□□ -0.56
PROM1-210ENST00000510224 STRCP1A6NGW2 1772 aa11.56□□□□□ -0.56
PROM1-210ENST00000510224 NUTM2BA6NNL0 878 aaPredicted RBP11.56□□□□□ -0.56
PROM1-210ENST00000510224 NUTM2EB1AL46 878 aaPredicted RBP11.56□□□□□ -0.56
PROM1-210ENST00000510224 NUTM2AQ8IVF1 878 aaPredicted RBP11.56□□□□□ -0.56
PROM1-210ENST00000510224 CCDC144AA2RUR9 1427 aa11.56□□□□□ -0.56
PROM1-210ENST00000510224 CADPS2Q86UW7 1296 aa11.56□□□□□ -0.56
PROM1-210ENST00000510224 SAFB2Q14151 953 aaKnown RBP eCLIP11.56□□□□□ -0.56
PROM1-210ENST00000510224 TMEM132EQ6IEE7 984 aa11.56□□□□□ -0.56
PROM1-210ENST00000510224 TMEM131LA2VDJ0 1609 aa11.55□□□□□ -0.56
PROM1-210ENST00000510224 CCER1Q8TC90 406 aaPredicted RBP11.55□□□□□ -0.56
PROM1-210ENST00000510224 MEX3CQ5U5Q3 659 aaKnown RBP11.54□□□□□ -0.56
PROM1-210ENST00000510224 METP08581 1390 aa11.54□□□□□ -0.56
PROM1-210ENST00000510224 DDX17Q92841 729 aaKnown RBP11.53□□□□□ -0.56
PROM1-210ENST00000510224 ADAMTS13Q76LX8 1427 aa11.53□□□□□ -0.56
PROM1-210ENST00000510224 SIN3AQ96ST3 1273 aa11.53□□□□□ -0.56
PROM1-210ENST00000510224 ADGRF5Q8IZF2 1346 aa11.52□□□□□ -0.57
PROM1-210ENST00000510224 ACIN1Q9UKV3 1341 aaKnown RBP11.51□□□□□ -0.57
PROM1-210ENST00000510224 SPHKAPQ2M3C7 1700 aa11.51□□□□□ -0.57
PROM1-210ENST00000510224 WAPLQ7Z5K2 1190 aa11.5□□□□□ -0.57
PROM1-210ENST00000510224 CLTCL1P53675 1640 aa11.49□□□□□ -0.57
PROM1-210ENST00000510224 DCAF11Q8TEB1 546 aa11.49□□□□□ -0.57
PROM1-210ENST00000510224 XPCQ01831 940 aaPredicted RBP11.49□□□□□ -0.57
PROM1-210ENST00000510224 PTPRUQ92729 1446 aa11.49□□□□□ -0.57
PROM1-210ENST00000510224 NKTRP30414 1462 aaKnown RBP11.48□□□□□ -0.57
PROM1-210ENST00000510224 HRCP23327 699 aa11.48□□□□□ -0.57
PROM1-210ENST00000510224 ESCO1Q5FWF5 840 aa11.48□□□□□ -0.57
PROM1-210ENST00000510224 CFAP70Q5T0N1 1121 aa11.48□□□□□ -0.57
PROM1-210ENST00000510224 RPGRIP1LQ68CZ1 1315 aa11.48□□□□□ -0.57
PROM1-210ENST00000510224 LMOD2Q6P5Q4 547 aa11.47□□□□□ -0.57
PROM1-210ENST00000510224 BRINP3Q76B58 766 aa11.47□□□□□ -0.57
PROM1-210ENST00000510224 KDM5AP29375 1690 aaKnown RBP11.47□□□□□ -0.57
PROM1-210ENST00000510224 POGKQ9P215 609 aa11.47□□□□□ -0.57
PROM1-210ENST00000510224 TRPM2O94759 1503 aa11.47□□□□□ -0.57
PROM1-210ENST00000510224 FAM135BQ49AJ0 1406 aa11.47□□□□□ -0.57
PROM1-210ENST00000510224 SOCS7O14512 581 aa11.47□□□□□ -0.57
PROM1-210ENST00000510224 ORAI2Q96SN7 254 aa11.47□□□□□ -0.57
PROM1-210ENST00000510224 PIK3R4Q99570 1358 aa11.46□□□□□ -0.57
PROM1-210ENST00000510224 ADAMTS2O95450 1211 aa11.46□□□□□ -0.57
PROM1-210ENST00000510224 KIF1BO60333 1816 aa11.46□□□□□ -0.58
PROM1-210ENST00000510224 HIRIP3Q9BW71 556 aaPredicted RBP11.45□□□□□ -0.58
PROM1-210ENST00000510224 FOXO3O43524 673 aa11.44□□□□□ -0.58
PROM1-210ENST00000510224 TRAK1Q9UPV9 953 aa11.44□□□□□ -0.58
PROM1-210ENST00000510224 ALKQ9UM73 1620 aa11.44□□□□□ -0.58
PROM1-210ENST00000510224 ROBO2Q9HCK4 1378 aa11.44□□□□□ -0.58
PROM1-210ENST00000510224 ROBO1Q9Y6N7 1651 aa11.43□□□□□ -0.58
PROM1-210ENST00000510224 CHD2O14647 1828 aaKnown RBP11.43□□□□□ -0.58
PROM1-210ENST00000510224 XIRP1Q702N8 1843 aaKnown RBP11.43□□□□□ -0.58
PROM1-210ENST00000510224 HAP1P54257 671 aaPredicted RBP11.43□□□□□ -0.58
PROM1-210ENST00000510224 MED1Q15648 1581 aaPredicted RBP11.42□□□□□ -0.58
PROM1-210ENST00000510224 C8orf37Q96NL8 207 aa11.42□□□□□ -0.58
PROM1-210ENST00000510224 NEXMIFQ5QGS0 1516 aa11.42□□□□□ -0.58
PROM1-210ENST00000510224 DHX57Q6P158 1386 aaKnown RBP11.42□□□□□ -0.58
PROM1-210ENST00000510224 ANKRD30BQ9BXX2 1392 aa11.42□□□□□ -0.58
PROM1-210ENST00000510224 JCADQ9P266 1359 aa11.42□□□□□ -0.58
PROM1-210ENST00000510224 LRRC59Q96AG4 307 aaKnown RBP11.41□□□□□ -0.58
PROM1-210ENST00000510224 PRAM1Q96QH2 718 aa11.41□□□□□ -0.58
PROM1-210ENST00000510224 POTEAQ6S8J7 498 aa11.4□□□□□ -0.58
PROM1-210ENST00000510224 NGLY1Q96IV0 654 aa11.4□□□□□ -0.58
PROM1-210ENST00000510224 MINK1Q8N4C8 1332 aaPredicted RBP11.4□□□□□ -0.58
PROM1-210ENST00000510224 TONSLQ96HA7 1378 aa11.4□□□□□ -0.59
PROM1-210ENST00000510224 L3MBTL2Q969R5 705 aa11.39□□□□□ -0.59
PROM1-210ENST00000510224 DIP2AQ14689 1571 aa11.39□□□□□ -0.59
PROM1-210ENST00000510224 NWD1Q149M9 1564 aa11.39□□□□□ -0.59
PROM1-210ENST00000510224 PMFBP1Q8TBY8 1022 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms