RNA–Protein interactions for RNA: ENST00000509507.5

CALCOCO2-215, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-215ENST00000509507 E9PCH4 1651 aa12.18□□□□□ -0.46
CALCOCO2-215ENST00000509507 UGGT1Q9NYU2 1555 aa12.18□□□□□ -0.46
CALCOCO2-215ENST00000509507 UBR1Q8IWV7 1749 aa12.17□□□□□ -0.46
CALCOCO2-215ENST00000509507 WASHC2AQ641Q2 1341 aa12.17□□□□□ -0.46
CALCOCO2-215ENST00000509507 HFM1A2PYH4 1435 aa12.17□□□□□ -0.46
CALCOCO2-215ENST00000509507 SYNMO15061 1565 aa12.17□□□□□ -0.46
CALCOCO2-215ENST00000509507 PIK3C2BO00750 1634 aa12.16□□□□□ -0.46
CALCOCO2-215ENST00000509507 PLA2R1Q13018 1463 aa12.15□□□□□ -0.46
CALCOCO2-215ENST00000509507 RPRD2Q5VT52 1461 aaKnown RBP12.15□□□□□ -0.46
CALCOCO2-215ENST00000509507 DDX10Q13206 875 aaKnown RBP12.14□□□□□ -0.47
CALCOCO2-215ENST00000509507 NUP155O75694 1391 aa12.13□□□□□ -0.47
CALCOCO2-215ENST00000509507 ANP32AP39687 249 aaKnown RBP12.13□□□□□ -0.47
CALCOCO2-215ENST00000509507 IPO9Q96P70 1041 aaKnown RBP12.13□□□□□ -0.47
CALCOCO2-215ENST00000509507 SPHKAPQ2M3C7 1700 aa12.13□□□□□ -0.47
CALCOCO2-215ENST00000509507 MYO5BQ9ULV0 1848 aa12.13□□□□□ -0.47
CALCOCO2-215ENST00000509507 KDM5AP29375 1690 aaKnown RBP12.12□□□□□ -0.47
CALCOCO2-215ENST00000509507 TRIM52Q96A61 297 aa12.12□□□□□ -0.47
CALCOCO2-215ENST00000509507 NOS1P29475 1434 aa12.12□□□□□ -0.47
CALCOCO2-215ENST00000509507 NEURL4Q96JN8 1562 aa12.12□□□□□ -0.47
CALCOCO2-215ENST00000509507 ADGRB3O60242 1522 aa12.11□□□□□ -0.47
CALCOCO2-215ENST00000509507 CCDC136Q96JN2 1154 aa12.1□□□□□ -0.47
CALCOCO2-215ENST00000509507 RAB3GAP2Q9H2M9 1393 aa12.09□□□□□ -0.47
CALCOCO2-215ENST00000509507 NCKAP5LQ9HCH0 1330 aa12.09□□□□□ -0.47
CALCOCO2-215ENST00000509507 SETD5Q9C0A6 1442 aa12.09□□□□□ -0.47
CALCOCO2-215ENST00000509507 IQGAP1P46940 1657 aa12.09□□□□□ -0.47
CALCOCO2-215ENST00000509507 PTPRTO14522 1441 aa12.08□□□□□ -0.48
CALCOCO2-215ENST00000509507 NBR1Q14596 966 aa12.07□□□□□ -0.48
CALCOCO2-215ENST00000509507 THEMISQ8N1K5 641 aaPredicted RBP12.07□□□□□ -0.48
CALCOCO2-215ENST00000509507 DMRT2Q9Y5R5 561 aa12.07□□□□□ -0.48
CALCOCO2-215ENST00000509507 SLIT1O75093 1534 aa12.06□□□□□ -0.48
CALCOCO2-215ENST00000509507 PAK3O75914 559 aaPredicted RBP12.06□□□□□ -0.48
CALCOCO2-215ENST00000509507 PKD2Q13563 968 aa12.06□□□□□ -0.48
CALCOCO2-215ENST00000509507 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
CALCOCO2-215ENST00000509507 TMEM131LA2VDJ0 1609 aa12.06□□□□□ -0.48
CALCOCO2-215ENST00000509507 IL27Q8NEV9 243 aa12.06□□□□□ -0.48
CALCOCO2-215ENST00000509507 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
CALCOCO2-215ENST00000509507 IDI1Q13907 227 aa12.05□□□□□ -0.48
CALCOCO2-215ENST00000509507 SCAF11Q99590 1463 aaKnown RBP12.05□□□□□ -0.48
CALCOCO2-215ENST00000509507 ARHGAP23Q9P227 1491 aa12.05□□□□□ -0.48
CALCOCO2-215ENST00000509507 CLTCL1P53675 1640 aa12.04□□□□□ -0.48
CALCOCO2-215ENST00000509507 TRPM2O94759 1503 aa12.04□□□□□ -0.48
CALCOCO2-215ENST00000509507 MED14O60244 1454 aa12.03□□□□□ -0.48
CALCOCO2-215ENST00000509507 HNRNPUQ00839 825 aaKnown RBP eCLIP12.03□□□□□ -0.48
CALCOCO2-215ENST00000509507 ANKLE2Q86XL3 938 aa12.03□□□□□ -0.48
CALCOCO2-215ENST00000509507 SLC52A1Q9NWF4 448 aa12.03□□□□□ -0.48
CALCOCO2-215ENST00000509507 NPHP4O75161 1426 aaPredicted RBP12.03□□□□□ -0.48
CALCOCO2-215ENST00000509507 KIF1BO60333 1816 aa12.03□□□□□ -0.48
CALCOCO2-215ENST00000509507 PPM1GO15355 546 aaPredicted RBP12.02□□□□□ -0.48
CALCOCO2-215ENST00000509507 ILDR2Q71H61 639 aa12.02□□□□□ -0.48
CALCOCO2-215ENST00000509507 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.48
CALCOCO2-215ENST00000509507 TMEM2Q9UHN6 1383 aa12.02□□□□□ -0.49
CALCOCO2-215ENST00000509507 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
CALCOCO2-215ENST00000509507 ZBED9Q6R2W3 1325 aa12.01□□□□□ -0.49
CALCOCO2-215ENST00000509507 LTBP4Q8N2S1 1624 aa12.01□□□□□ -0.49
CALCOCO2-215ENST00000509507 CHGAP10645 457 aaKnown RBP12□□□□□ -0.49
CALCOCO2-215ENST00000509507 LTKP29376 864 aa11.99□□□□□ -0.49
CALCOCO2-215ENST00000509507 PKNOX2Q96KN3 472 aa11.99□□□□□ -0.49
CALCOCO2-215ENST00000509507 ZNF335Q9H4Z2 1342 aaPredicted RBP11.99□□□□□ -0.49
CALCOCO2-215ENST00000509507 STRCP1A6NGW2 1772 aa11.99□□□□□ -0.49
CALCOCO2-215ENST00000509507 ZFYVE9O95405 1425 aa11.98□□□□□ -0.49
CALCOCO2-215ENST00000509507 EIF5BO60841 1220 aaKnown RBP11.98□□□□□ -0.49
CALCOCO2-215ENST00000509507 GLIPR1L2Q4G1C9 344 aa11.98□□□□□ -0.49
CALCOCO2-215ENST00000509507 TXNDC2Q86VQ3 553 aa11.98□□□□□ -0.49
CALCOCO2-215ENST00000509507 EID1Q9Y6B2 187 aa11.98□□□□□ -0.49
CALCOCO2-215ENST00000509507 RIMS2Q9UQ26 1411 aa11.97□□□□□ -0.49
CALCOCO2-215ENST00000509507 FOXD1Q16676 465 aa11.96□□□□□ -0.49
CALCOCO2-215ENST00000509507 RNF123Q5XPI4 1314 aa11.96□□□□□ -0.49
CALCOCO2-215ENST00000509507 CERKQ8TCT0 537 aa11.96□□□□□ -0.5
CALCOCO2-215ENST00000509507 SMG6Q86US8 1419 aaKnown RBP11.95□□□□□ -0.5
CALCOCO2-215ENST00000509507 MPHOSPH9Q99550 1183 aa11.95□□□□□ -0.5
CALCOCO2-215ENST00000509507 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.95□□□□□ -0.5
CALCOCO2-215ENST00000509507 CPS1P31327 1500 aa11.94□□□□□ -0.5
CALCOCO2-215ENST00000509507 IRX6P78412 446 aaPredicted RBP11.94□□□□□ -0.5
CALCOCO2-215ENST00000509507 NEXMIFQ5QGS0 1516 aa11.94□□□□□ -0.5
CALCOCO2-215ENST00000509507 B4GALNT3Q6L9W6 998 aa11.94□□□□□ -0.5
CALCOCO2-215ENST00000509507 PPLO60437 1756 aa11.93□□□□□ -0.5
CALCOCO2-215ENST00000509507 CCDC144AA2RUR9 1427 aa11.92□□□□□ -0.5
CALCOCO2-215ENST00000509507 DISP3Q9P2K9 1392 aa11.92□□□□□ -0.5
CALCOCO2-215ENST00000509507 PLEKHG1Q9ULL1 1385 aa11.92□□□□□ -0.5
CALCOCO2-215ENST00000509507 ZNF326Q5BKZ1 582 aaKnown RBP11.92□□□□□ -0.5
CALCOCO2-215ENST00000509507 NUTM2DQ5VT03 806 aaPredicted RBP11.92□□□□□ -0.5
CALCOCO2-215ENST00000509507 FAM43AQ8N2R8 423 aa11.92□□□□□ -0.5
CALCOCO2-215ENST00000509507 NRXN3Q9Y4C0 1643 aa11.91□□□□□ -0.5
CALCOCO2-215ENST00000509507 DIP2AQ14689 1571 aa11.91□□□□□ -0.5
CALCOCO2-215ENST00000509507 IQSEC2Q5JU85 1478 aa11.91□□□□□ -0.5
CALCOCO2-215ENST00000509507 IFT172Q9UG01 1749 aa11.91□□□□□ -0.5
CALCOCO2-215ENST00000509507 XIRP1Q702N8 1843 aaKnown RBP11.9□□□□□ -0.5
CALCOCO2-215ENST00000509507 TONSLQ96HA7 1378 aa11.9□□□□□ -0.5
CALCOCO2-215ENST00000509507 NWD1Q149M9 1564 aa11.9□□□□□ -0.5
CALCOCO2-215ENST00000509507 CHD2O14647 1828 aaKnown RBP11.9□□□□□ -0.5
CALCOCO2-215ENST00000509507 NEFMP07197 916 aa11.9□□□□□ -0.5
CALCOCO2-215ENST00000509507 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.9□□□□□ -0.5
CALCOCO2-215ENST00000509507 SLC26A8Q96RN1 970 aa11.9□□□□□ -0.5
CALCOCO2-215ENST00000509507 RTN4Q9NQC3 1192 aaKnown RBP11.9□□□□□ -0.5
CALCOCO2-215ENST00000509507 SETBP1Q9Y6X0 1596 aa11.89□□□□□ -0.51
CALCOCO2-215ENST00000509507 HDGFP51858 240 aaKnown RBP11.89□□□□□ -0.51
CALCOCO2-215ENST00000509507 TCERG1O14776 1098 aaKnown RBP11.88□□□□□ -0.51
CALCOCO2-215ENST00000509507 MS4A1P11836 297 aa11.88□□□□□ -0.51
CALCOCO2-215ENST00000509507 GSE1Q14687 1217 aa11.88□□□□□ -0.51
CALCOCO2-215ENST00000509507 DDRGK1Q96HY6 314 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms