RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 EFCAB6Q5THR3 1501 aa11.09□□□□□ -0.63
TRIO-213ENST00000509354 GCC2Q8IWJ2 1684 aa11.09□□□□□ -0.63
TRIO-213ENST00000509354 PTPRTO14522 1441 aa11.09□□□□□ -0.63
TRIO-213ENST00000509354 SYNMO15061 1565 aa11.08□□□□□ -0.64
TRIO-213ENST00000509354 UGGT1Q9NYU2 1555 aa11.08□□□□□ -0.64
TRIO-213ENST00000509354 NLRP1Q9C000 1473 aa11.08□□□□□ -0.64
TRIO-213ENST00000509354 MYO5BQ9ULV0 1848 aa11.08□□□□□ -0.64
TRIO-213ENST00000509354 PRR29P0C7W0 189 aa11.08□□□□□ -0.64
TRIO-213ENST00000509354 KLHL34Q8N239 644 aa11.08□□□□□ -0.64
TRIO-213ENST00000509354 PCGF6Q9BYE7 350 aa11.08□□□□□ -0.64
TRIO-213ENST00000509354 PIK3C2BO00750 1634 aa11.08□□□□□ -0.64
TRIO-213ENST00000509354 LMTK2Q8IWU2 1503 aa11.08□□□□□ -0.64
TRIO-213ENST00000509354 NCKAP5LQ9HCH0 1330 aa11.08□□□□□ -0.64
TRIO-213ENST00000509354 TET3O43151 1660 aa11.08□□□□□ -0.64
TRIO-213ENST00000509354 LTBP4Q8N2S1 1624 aa11.07□□□□□ -0.64
TRIO-213ENST00000509354 ANKRD50Q9ULJ7 1429 aa11.07□□□□□ -0.64
TRIO-213ENST00000509354 IQGAP3Q86VI3 1631 aa11.06□□□□□ -0.64
TRIO-213ENST00000509354 E9PCH4 1651 aa11.05□□□□□ -0.64
TRIO-213ENST00000509354 IQGAP1P46940 1657 aa11.05□□□□□ -0.64
TRIO-213ENST00000509354 ITGAEP38570 1179 aa11.05□□□□□ -0.64
TRIO-213ENST00000509354 ARHGAP31Q2M1Z3 1444 aa11.05□□□□□ -0.64
TRIO-213ENST00000509354 KANK1Q14678 1352 aa11.04□□□□□ -0.64
TRIO-213ENST00000509354 RRBP1Q9P2E9 1410 aaKnown RBP11.04□□□□□ -0.64
TRIO-213ENST00000509354 ROCK1Q13464 1354 aa11.03□□□□□ -0.64
TRIO-213ENST00000509354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRIO-213ENST00000509354 STRCP1A6NGW2 1772 aa11.03□□□□□ -0.64
TRIO-213ENST00000509354 PITPNM1O00562 1244 aa11.02□□□□□ -0.65
TRIO-213ENST00000509354 KDM5AP29375 1690 aaKnown RBP11.01□□□□□ -0.65
TRIO-213ENST00000509354 ADGRB3O60242 1522 aa11.01□□□□□ -0.65
TRIO-213ENST00000509354 IFNLR1Q8IU57 520 aaPredicted RBP11.01□□□□□ -0.65
TRIO-213ENST00000509354 CERKQ8TCT0 537 aa11.01□□□□□ -0.65
TRIO-213ENST00000509354 FBXO41Q8TF61 875 aa11.01□□□□□ -0.65
TRIO-213ENST00000509354 ZNF335Q9H4Z2 1342 aaPredicted RBP11□□□□□ -0.65
TRIO-213ENST00000509354 SPHKAPQ2M3C7 1700 aa11□□□□□ -0.65
TRIO-213ENST00000509354 NOS1P29475 1434 aa11□□□□□ -0.65
TRIO-213ENST00000509354 PKD2Q13563 968 aa10.99□□□□□ -0.65
TRIO-213ENST00000509354 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
TRIO-213ENST00000509354 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
TRIO-213ENST00000509354 SLIT1O75093 1534 aa10.99□□□□□ -0.65
TRIO-213ENST00000509354 NPHP4O75161 1426 aaPredicted RBP10.98□□□□□ -0.65
TRIO-213ENST00000509354 MED14O60244 1454 aa10.98□□□□□ -0.65
TRIO-213ENST00000509354 RPRD2Q5VT52 1461 aaKnown RBP10.98□□□□□ -0.65
TRIO-213ENST00000509354 ARHGAP23Q9P227 1491 aa10.98□□□□□ -0.65
TRIO-213ENST00000509354 SCAF11Q99590 1463 aaKnown RBP10.97□□□□□ -0.65
TRIO-213ENST00000509354 TMEM131LA2VDJ0 1609 aa10.96□□□□□ -0.65
TRIO-213ENST00000509354 NAIPQ13075 1403 aa10.96□□□□□ -0.65
TRIO-213ENST00000509354 THEMISQ8N1K5 641 aaPredicted RBP10.96□□□□□ -0.65
TRIO-213ENST00000509354 XIRP1Q702N8 1843 aaKnown RBP10.95□□□□□ -0.66
TRIO-213ENST00000509354 IQSEC2Q5JU85 1478 aa10.94□□□□□ -0.66
TRIO-213ENST00000509354 ANKLE2Q86XL3 938 aa10.94□□□□□ -0.66
TRIO-213ENST00000509354 NUP155O75694 1391 aa10.93□□□□□ -0.66
TRIO-213ENST00000509354 IDI1Q13907 227 aa10.93□□□□□ -0.66
TRIO-213ENST00000509354 CPS1P31327 1500 aa10.93□□□□□ -0.66
TRIO-213ENST00000509354 CLTCL1P53675 1640 aa10.92□□□□□ -0.66
TRIO-213ENST00000509354 LTKP29376 864 aa10.92□□□□□ -0.66
TRIO-213ENST00000509354 HFM1A2PYH4 1435 aa10.92□□□□□ -0.66
TRIO-213ENST00000509354 TMEM2Q9UHN6 1383 aa10.91□□□□□ -0.66
TRIO-213ENST00000509354 HRCP23327 699 aa10.9□□□□□ -0.66
TRIO-213ENST00000509354 KIF1BO60333 1816 aa10.9□□□□□ -0.66
TRIO-213ENST00000509354 ALKQ9UM73 1620 aa10.9□□□□□ -0.66
TRIO-213ENST00000509354 ZFYVE9O95405 1425 aa10.9□□□□□ -0.66
TRIO-213ENST00000509354 TXNDC2Q86VQ3 553 aa10.89□□□□□ -0.67
TRIO-213ENST00000509354 CHD2O14647 1828 aaKnown RBP10.88□□□□□ -0.67
TRIO-213ENST00000509354 TRPM2O94759 1503 aa10.88□□□□□ -0.67
TRIO-213ENST00000509354 LRRC7Q96NW7 1537 aa10.88□□□□□ -0.67
TRIO-213ENST00000509354 NWD1Q149M9 1564 aa10.87□□□□□ -0.67
TRIO-213ENST00000509354 RIMS2Q9UQ26 1411 aa10.87□□□□□ -0.67
TRIO-213ENST00000509354 CHRDL2Q6WN34 429 aa10.86□□□□□ -0.67
TRIO-213ENST00000509354 CREBZFQ9NS37 354 aa10.86□□□□□ -0.67
TRIO-213ENST00000509354 SLC52A1Q9NWF4 448 aa10.86□□□□□ -0.67
TRIO-213ENST00000509354 EID1Q9Y6B2 187 aa10.86□□□□□ -0.67
TRIO-213ENST00000509354 NRXN3Q9Y4C0 1643 aa10.86□□□□□ -0.67
TRIO-213ENST00000509354 CHGAP10645 457 aaKnown RBP10.85□□□□□ -0.67
TRIO-213ENST00000509354 UBAP1LF5GYI3 381 aa10.84□□□□□ -0.67
TRIO-213ENST00000509354 SLC26A8Q96RN1 970 aa10.83□□□□□ -0.68
TRIO-213ENST00000509354 NEXMIFQ5QGS0 1516 aa10.83□□□□□ -0.68
TRIO-213ENST00000509354 PPLO60437 1756 aa10.82□□□□□ -0.68
TRIO-213ENST00000509354 DIP2AQ14689 1571 aa10.82□□□□□ -0.68
TRIO-213ENST00000509354 PLEKHG1Q9ULL1 1385 aa10.82□□□□□ -0.68
TRIO-213ENST00000509354 NUTM2DQ5VT03 806 aaPredicted RBP10.82□□□□□ -0.68
TRIO-213ENST00000509354 TRIM52Q96A61 297 aa10.82□□□□□ -0.68
TRIO-213ENST00000509354 SETD1AO15047 1707 aaKnown RBP10.81□□□□□ -0.68
TRIO-213ENST00000509354 IFT172Q9UG01 1749 aa10.81□□□□□ -0.68
TRIO-213ENST00000509354 NKTRP30414 1462 aaKnown RBP10.81□□□□□ -0.68
TRIO-213ENST00000509354 PPP1R15AO75807 674 aaPredicted RBP10.8□□□□□ -0.68
TRIO-213ENST00000509354 GSE1Q14687 1217 aa10.8□□□□□ -0.68
TRIO-213ENST00000509354 ADAMTS13Q76LX8 1427 aa10.8□□□□□ -0.68
TRIO-213ENST00000509354 SETBP1Q9Y6X0 1596 aa10.8□□□□□ -0.68
TRIO-213ENST00000509354 XRN1Q8IZH2 1706 aaKnown RBP10.8□□□□□ -0.68
TRIO-213ENST00000509354 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
TRIO-213ENST00000509354 FAM212AQ96EL1 285 aa10.79□□□□□ -0.68
TRIO-213ENST00000509354 BCANQ96GW7 911 aa10.79□□□□□ -0.68
TRIO-213ENST00000509354 ZEB1P37275 1124 aaPredicted RBP10.78□□□□□ -0.68
TRIO-213ENST00000509354 PIP4K2BP78356 416 aa10.78□□□□□ -0.68
TRIO-213ENST00000509354 CIZ1Q9ULV3 898 aaPredicted RBP10.78□□□□□ -0.68
TRIO-213ENST00000509354 TMEM94Q12767 1356 aa10.77□□□□□ -0.68
TRIO-213ENST00000509354 FXR2P51116 673 aaKnown RBP eCLIP10.77□□□□□ -0.698e-8■■■■□ 26.5
TRIO-213ENST00000509354 RBM33Q96EV2 1170 aaKnown RBP10.77□□□□□ -0.69
TRIO-213ENST00000509354 SETD5Q9C0A6 1442 aa10.76□□□□□ -0.69
TRIO-213ENST00000509354 ROBO1Q9Y6N7 1651 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms