RNA–Protein interactions for RNA: ENST00000509227.1

PAPD4-212, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-212ENST00000509227 SWT1Q5T5J6 900 aaKnown RBP11.12□□□□□ -0.63
PAPD4-212ENST00000509227 PRR14Q9BWN1 585 aa11.12□□□□□ -0.63
PAPD4-212ENST00000509227 SPDYE16A6NNV3 312 aaPredicted RBP11.11□□□□□ -0.63
PAPD4-212ENST00000509227 WFS1O76024 890 aa11.11□□□□□ -0.63
PAPD4-212ENST00000509227 LIAT1Q6ZQX7 453 aa11.11□□□□□ -0.63
PAPD4-212ENST00000509227 TNFRSF10AO00220 468 aa11.1□□□□□ -0.63
PAPD4-212ENST00000509227 PRIM1P49642 420 aaKnown RBP11.1□□□□□ -0.63
PAPD4-212ENST00000509227 BBXQ8WY36 941 aaPredicted RBP11.1□□□□□ -0.63
PAPD4-212ENST00000509227 PCDHB3Q9Y5E6 796 aa11.1□□□□□ -0.63
PAPD4-212ENST00000509227 WIPF1O43516 503 aa11.08□□□□□ -0.64
PAPD4-212ENST00000509227 SLC4A3P48751 1232 aa11.08□□□□□ -0.64
PAPD4-212ENST00000509227 CRIPAKQ8N1N5 446 aa11.07□□□□□ -0.64
PAPD4-212ENST00000509227 INSM1Q01101 510 aaPredicted RBP11.06□□□□□ -0.64
PAPD4-212ENST00000509227 BLOC1S3Q6QNY0 202 aa11.06□□□□□ -0.64
PAPD4-212ENST00000509227 PAXIP1Q6ZW49 1069 aaPredicted RBP11.06□□□□□ -0.64
PAPD4-212ENST00000509227 TTC13Q8NBP0 860 aa11.05□□□□□ -0.64
PAPD4-212ENST00000509227 PPEF1O14829 653 aaPredicted RBP11.04□□□□□ -0.64
PAPD4-212ENST00000509227 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
PAPD4-212ENST00000509227 TLL1O43897 1013 aa11.03□□□□□ -0.64
PAPD4-212ENST00000509227 S1PR4O95977 384 aa11.03□□□□□ -0.64
PAPD4-212ENST00000509227 NFX1Q12986 1120 aaKnown RBP11.03□□□□□ -0.64
PAPD4-212ENST00000509227 CDHR5Q9HBB8 845 aa11.03□□□□□ -0.64
PAPD4-212ENST00000509227 LMOD2Q6P5Q4 547 aa11.01□□□□□ -0.65
PAPD4-212ENST00000509227 LOC100996750A0A140TA64 210 aa11□□□□□ -0.65
PAPD4-212ENST00000509227 KRTAP4-6Q9BYQ5 205 aa11□□□□□ -0.65
PAPD4-212ENST00000509227 GRXCR2A6NFK2 248 aa10.99□□□□□ -0.65
PAPD4-212ENST00000509227 DACH1Q9UI36 760 aa10.99□□□□□ -0.65
PAPD4-212ENST00000509227 AVPP01185 164 aa10.98□□□□□ -0.65
PAPD4-212ENST00000509227 GMPR2Q9P2T1 348 aaKnown RBP10.98□□□□□ -0.65
PAPD4-212ENST00000509227 C11orf95C9JLR9 678 aaPredicted RBP10.97□□□□□ -0.65
PAPD4-212ENST00000509227 OSBPP22059 807 aa10.97□□□□□ -0.65
PAPD4-212ENST00000509227 PADI6Q6TGC4 694 aa10.97□□□□□ -0.65
PAPD4-212ENST00000509227 EYA1Q99502 592 aa10.97□□□□□ -0.65
PAPD4-212ENST00000509227 PKD2L1Q9P0L9 805 aa10.97□□□□□ -0.65
PAPD4-212ENST00000509227 SPRYD3Q8NCJ5 442 aa10.95□□□□□ -0.66
PAPD4-212ENST00000509227 TSHZ2Q9NRE2 1034 aa10.95□□□□□ -0.66
PAPD4-212ENST00000509227 ACTN4O43707 911 aaKnown RBP10.94□□□□□ -0.66
PAPD4-212ENST00000509227 ADH1BP00325 375 aa10.94□□□□□ -0.66
PAPD4-212ENST00000509227 PLA2G2CQ5R387 149 aa10.94□□□□□ -0.66
PAPD4-212ENST00000509227 AXIN1O15169 862 aa10.93□□□□□ -0.66
PAPD4-212ENST00000509227 CTC1Q2NKJ3 1217 aa10.93□□□□□ -0.66
PAPD4-212ENST00000509227 NPDC1Q9NQX5 325 aaPredicted RBP10.93□□□□□ -0.66
PAPD4-212ENST00000509227 ARIH1Q9Y4X5 557 aaPredicted RBP10.92□□□□□ -0.66
PAPD4-212ENST00000509227 FOXC1Q12948 553 aa10.91□□□□□ -0.66
PAPD4-212ENST00000509227 SMCPP49901 116 aaPredicted RBP10.9□□□□□ -0.66
PAPD4-212ENST00000509227 KMT5BQ4FZB7 885 aa10.9□□□□□ -0.66
PAPD4-212ENST00000509227 SLC6A16Q9GZN6 736 aa10.9□□□□□ -0.66
PAPD4-212ENST00000509227 TOR4AQ9NXH8 423 aa10.9□□□□□ -0.66
PAPD4-212ENST00000509227 LCE2CQ5TA81 110 aa10.87□□□□□ -0.67
PAPD4-212ENST00000509227 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
PAPD4-212ENST00000509227 NR1I2O75469 434 aa10.86□□□□□ -0.67
PAPD4-212ENST00000509227 DNAJB2P25686 324 aa10.85□□□□□ -0.67
PAPD4-212ENST00000509227 TERTO14746 1132 aaKnown RBP10.84□□□□□ -0.67
PAPD4-212ENST00000509227 RPIAP49247 311 aa10.84□□□□□ -0.67
PAPD4-212ENST00000509227 CYP4X1Q8N118 509 aa10.84□□□□□ -0.67
PAPD4-212ENST00000509227 E2F4Q16254 413 aa10.83□□□□□ -0.68
PAPD4-212ENST00000509227 TMEM134Q9H6X4 195 aa10.83□□□□□ -0.68
PAPD4-212ENST00000509227 CFHP08603 1231 aa10.82□□□□□ -0.68
PAPD4-212ENST00000509227 FAM181BA6NEQ2 426 aa10.81□□□□□ -0.68
PAPD4-212ENST00000509227 CD2BP2O95400 341 aaKnown RBP10.79□□□□□ -0.68
PAPD4-212ENST00000509227 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
PAPD4-212ENST00000509227 SCUBE3Q8IX30 993 aa10.78□□□□□ -0.68
PAPD4-212ENST00000509227 SNRPBP14678 240 aaKnown RBP10.77□□□□□ -0.69
PAPD4-212ENST00000509227 RBM46Q8TBY0 533 aaKnown RBP10.77□□□□□ -0.69
PAPD4-212ENST00000509227 ATP13A2Q9NQ11 1180 aa10.77□□□□□ -0.69
PAPD4-212ENST00000509227 SPSB2Q99619 263 aa10.76□□□□□ -0.69
PAPD4-212ENST00000509227 TRIM47Q96LD4 638 aa10.75□□□□□ -0.69
PAPD4-212ENST00000509227 SENP2Q9HC62 589 aa10.75□□□□□ -0.69
PAPD4-212ENST00000509227 SLC10A3P09131 477 aa10.74□□□□□ -0.69
PAPD4-212ENST00000509227 RCCD1A6NED2 376 aa10.72□□□□□ -0.69
PAPD4-212ENST00000509227 TTC24A2A3L6 582 aaPredicted RBP10.71□□□□□ -0.69
PAPD4-212ENST00000509227 KDM2AQ9Y2K7 1162 aa10.71□□□□□ -0.69
PAPD4-212ENST00000509227 ADGRG1Q9Y653 693 aa10.71□□□□□ -0.69
PAPD4-212ENST00000509227 FCF1Q9Y324 198 aaKnown RBP10.7□□□□□ -0.7
PAPD4-212ENST00000509227 SMPD1P17405 629 aa10.68□□□□□ -0.7
PAPD4-212ENST00000509227 LORP23490 312 aaPredicted RBP10.68□□□□□ -0.7
PAPD4-212ENST00000509227 KIFC2Q96AC6 838 aa10.68□□□□□ -0.7
PAPD4-212ENST00000509227 PUS10Q3MIT2 529 aaKnown RBP10.67□□□□□ -0.7
PAPD4-212ENST00000509227 ZSCAN1Q8NBB4 408 aa10.67□□□□□ -0.7
PAPD4-212ENST00000509227 SLC16A10Q8TF71 515 aa10.67□□□□□ -0.7
PAPD4-212ENST00000509227 HAP1P54257 671 aaPredicted RBP10.65□□□□□ -0.7
PAPD4-212ENST00000509227 PTGDRQ13258 359 aa10.65□□□□□ -0.7
PAPD4-212ENST00000509227 SUZ12Q15022 739 aaKnown RBP10.65□□□□□ -0.7
PAPD4-212ENST00000509227 SNIP1Q8TAD8 396 aaKnown RBP10.65□□□□□ -0.7
PAPD4-212ENST00000509227 WNT7AO00755 349 aa10.64□□□□□ -0.71
PAPD4-212ENST00000509227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.63□□□□□ -0.71
PAPD4-212ENST00000509227 KCNV2Q8TDN2 545 aa10.63□□□□□ -0.71
PAPD4-212ENST00000509227 WDR70Q9NW82 654 aa10.63□□□□□ -0.71
PAPD4-212ENST00000509227 THAP11Q96EK4 314 aa10.62□□□□□ -0.71
PAPD4-212ENST00000509227 GMPRP36959 345 aa10.61□□□□□ -0.71
PAPD4-212ENST00000509227 ZBTB24O43167 697 aaPredicted RBP10.6□□□□□ -0.71
PAPD4-212ENST00000509227 RSPH4AQ5TD94 716 aa10.6□□□□□ -0.71
PAPD4-212ENST00000509227 NXF1Q9UBU9 619 aaKnown RBP10.6□□□□□ -0.71
PAPD4-212ENST00000509227 NPAS3Q8IXF0 933 aa10.59□□□□□ -0.71
PAPD4-212ENST00000509227 FAM160A2Q8N612 972 aaPredicted RBP10.59□□□□□ -0.71
PAPD4-212ENST00000509227 FAM161AQ3B820 660 aa10.58□□□□□ -0.72
PAPD4-212ENST00000509227 MORN1Q5T089 497 aa10.58□□□□□ -0.72
PAPD4-212ENST00000509227 IRF7Q92985 503 aa10.58□□□□□ -0.72
PAPD4-212ENST00000509227 J3QL48 77 aa10.57□□□□□ -0.72
PAPD4-212ENST00000509227 FMNL1O95466 1100 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms